BLASTX nr result

ID: Bupleurum21_contig00014586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014586
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266779.1| PREDICTED: RNA-binding protein 38 [Vitis vin...   278   4e-73
emb|CAN73746.1| hypothetical protein VITISV_041364 [Vitis vinifera]   278   4e-73
ref|XP_003534424.1| PREDICTED: RNA-binding protein 38-like [Glyc...   275   4e-72
ref|XP_003540599.1| PREDICTED: RNA-binding protein 38-like [Glyc...   272   3e-71
ref|XP_002329167.1| predicted protein [Populus trichocarpa] gi|2...   270   1e-70

>ref|XP_002266779.1| PREDICTED: RNA-binding protein 38 [Vitis vinifera]
           gi|297734754|emb|CBI16988.3| unnamed protein product
           [Vitis vinifera]
          Length = 264

 Score =  278 bits (711), Expect = 4e-73
 Identities = 135/146 (92%), Positives = 140/146 (95%)
 Frame = +3

Query: 3   VGGLAWETQKETMKKYFEQFGEILEAVVITDKTTGRSKGYGFVTFQEPDAAMRACVDAAP 182
           VGGLAWETQKETMKKYFEQFGEILEAVVITDKTTGRSKGYGFVTF+EPDAAMRACVDAAP
Sbjct: 20  VGGLAWETQKETMKKYFEQFGEILEAVVITDKTTGRSKGYGFVTFREPDAAMRACVDAAP 79

Query: 183 VIDGRRANCNLASLGVQRSKPSTPKHGGGGRNFRVMSAFQATGFQGGMGTTFPSATTYPH 362
           VIDGRRANCNLASLGVQRSKPSTPKH GGGRNFRVM +FQ TGFQGG+GT FPSA T+PH
Sbjct: 80  VIDGRRANCNLASLGVQRSKPSTPKH-GGGRNFRVMGSFQ-TGFQGGVGTAFPSAATFPH 137

Query: 363 YAIQQGIPYNLYGYSPYSADYTYPTN 440
           YAIQQGIPYNLYGYSPYS DYTYPT+
Sbjct: 138 YAIQQGIPYNLYGYSPYSPDYTYPTS 163


>emb|CAN73746.1| hypothetical protein VITISV_041364 [Vitis vinifera]
          Length = 269

 Score =  278 bits (711), Expect = 4e-73
 Identities = 135/146 (92%), Positives = 140/146 (95%)
 Frame = +3

Query: 3   VGGLAWETQKETMKKYFEQFGEILEAVVITDKTTGRSKGYGFVTFQEPDAAMRACVDAAP 182
           VGGLAWETQKETMKKYFEQFGEILEAVVITDKTTGRSKGYGFVTF+EPDAAMRACVDAAP
Sbjct: 20  VGGLAWETQKETMKKYFEQFGEILEAVVITDKTTGRSKGYGFVTFREPDAAMRACVDAAP 79

Query: 183 VIDGRRANCNLASLGVQRSKPSTPKHGGGGRNFRVMSAFQATGFQGGMGTTFPSATTYPH 362
           VIDGRRANCNLASLGVQRSKPSTPKH GGGRNFRVM +FQ TGFQGG+GT FPSA T+PH
Sbjct: 80  VIDGRRANCNLASLGVQRSKPSTPKH-GGGRNFRVMGSFQ-TGFQGGVGTAFPSAATFPH 137

Query: 363 YAIQQGIPYNLYGYSPYSADYTYPTN 440
           YAIQQGIPYNLYGYSPYS DYTYPT+
Sbjct: 138 YAIQQGIPYNLYGYSPYSPDYTYPTS 163


>ref|XP_003534424.1| PREDICTED: RNA-binding protein 38-like [Glycine max]
          Length = 266

 Score =  275 bits (702), Expect = 4e-72
 Identities = 130/146 (89%), Positives = 139/146 (95%)
 Frame = +3

Query: 3   VGGLAWETQKETMKKYFEQFGEILEAVVITDKTTGRSKGYGFVTFQEPDAAMRACVDAAP 182
           VGGLAWETQKETMKKYFEQFGEILEAVVITDK TGRSKGYGFVTF+EP+AAMRACVD AP
Sbjct: 20  VGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDPAP 79

Query: 183 VIDGRRANCNLASLGVQRSKPSTPKHGGGGRNFRVMSAFQATGFQGGMGTTFPSATTYPH 362
           VIDGRRANCNLASLGVQRSKPSTPKHGGGGRNFRVM +FQ TGF GG+G++FPSA T+PH
Sbjct: 80  VIDGRRANCNLASLGVQRSKPSTPKHGGGGRNFRVMGSFQ-TGFGGGVGSSFPSAATFPH 138

Query: 363 YAIQQGIPYNLYGYSPYSADYTYPTN 440
           YAIQQGIPYN+YGYSPYS DYTYPT+
Sbjct: 139 YAIQQGIPYNVYGYSPYSPDYTYPTS 164


>ref|XP_003540599.1| PREDICTED: RNA-binding protein 38-like [Glycine max]
          Length = 267

 Score =  272 bits (695), Expect = 3e-71
 Identities = 129/146 (88%), Positives = 137/146 (93%)
 Frame = +3

Query: 3   VGGLAWETQKETMKKYFEQFGEILEAVVITDKTTGRSKGYGFVTFQEPDAAMRACVDAAP 182
           VGGLAWETQKETMKKYFEQFGEILEAVVITDK TGRSKGYGFVTF+EP+AAMRACVD AP
Sbjct: 20  VGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMRACVDPAP 79

Query: 183 VIDGRRANCNLASLGVQRSKPSTPKHGGGGRNFRVMSAFQATGFQGGMGTTFPSATTYPH 362
           VIDGRRANCNLASLGVQRSKPSTPKHGG GRNFRVM +FQ TGF GG+G+ FPSA T+PH
Sbjct: 80  VIDGRRANCNLASLGVQRSKPSTPKHGGAGRNFRVMGSFQ-TGFGGGVGSAFPSAATFPH 138

Query: 363 YAIQQGIPYNLYGYSPYSADYTYPTN 440
           YAIQQGIPYN+YGYSPYS DYTYPT+
Sbjct: 139 YAIQQGIPYNVYGYSPYSPDYTYPTS 164


>ref|XP_002329167.1| predicted protein [Populus trichocarpa] gi|222870948|gb|EEF08079.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score =  270 bits (690), Expect = 1e-70
 Identities = 128/146 (87%), Positives = 137/146 (93%)
 Frame = +3

Query: 3   VGGLAWETQKETMKKYFEQFGEILEAVVITDKTTGRSKGYGFVTFQEPDAAMRACVDAAP 182
           VGGLAWETQKETMKKYFEQFGEILEAVVITDK TGRSKGYGFVTF+EPDAAMRACVDAAP
Sbjct: 20  VGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAP 79

Query: 183 VIDGRRANCNLASLGVQRSKPSTPKHGGGGRNFRVMSAFQATGFQGGMGTTFPSATTYPH 362
           VIDGRRANCNLAS+GVQRSKPSTPKHGG GRNFRVMS+FQ TGF GG+GT FP A ++PH
Sbjct: 80  VIDGRRANCNLASMGVQRSKPSTPKHGGAGRNFRVMSSFQ-TGFGGGVGTAFPPAASFPH 138

Query: 363 YAIQQGIPYNLYGYSPYSADYTYPTN 440
           YAIQQG+PYN+YGYS YS DYTYPT+
Sbjct: 139 YAIQQGMPYNVYGYSSYSPDYTYPTS 164


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