BLASTX nr result
ID: Bupleurum21_contig00014548
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00014548
(2465 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002511109.1| poly(A) polymerase, putative [Ricinus commun... 626 e-177
ref|XP_002266814.1| PREDICTED: CCA-adding enzyme [Vitis vinifera... 619 e-175
ref|XP_002318161.1| predicted protein [Populus trichocarpa] gi|2... 615 e-173
ref|XP_002321741.1| predicted protein [Populus trichocarpa] gi|2... 570 e-160
ref|NP_197758.2| Polynucleotide adenylyltransferase family prote... 565 e-158
>ref|XP_002511109.1| poly(A) polymerase, putative [Ricinus communis]
gi|223550224|gb|EEF51711.1| poly(A) polymerase, putative
[Ricinus communis]
Length = 524
Score = 626 bits (1615), Expect = e-177
Identities = 315/529 (59%), Positives = 389/529 (73%), Gaps = 5/529 (0%)
Frame = -3
Query: 1788 MAIAVGFGFSCRPHLPLRHHFCHCVRKVRFGSVAAV--IDEPDSFL--KGCNSSTEXXXX 1621
MAI GF+CRPH LR F HC+RK R+G+V A+ +DEP+ + K NS E
Sbjct: 1 MAITGLSGFACRPHFSLRPPFFHCIRKARYGAVVAIETLDEPEPIIDNKRHNSGVELREG 60
Query: 1620 XXXXXXXDCTKAPVWKRFTSKELGISNKMIPRPIRVVLNGLNKKGFKVYLVGGCVRDLIL 1441
P WK+ SKELGI+N MI P R +LNGL ++G++VYLVGGCVRDLIL
Sbjct: 61 DC--------NGPKWKKLNSKELGITNSMIASPTRKILNGLKQRGYEVYLVGGCVRDLIL 112
Query: 1440 KQKPKDFDVLTSAELHEVKWTFPQCQMIGRRFPICHVTVDGTIVEVSSFSTSARS-GRKV 1264
K+ PKDFD++TSAEL EV F +C+++GRRFPICHV V T+VEVSSFST+ + G
Sbjct: 113 KRIPKDFDIITSAELREVARAFSRCEIVGRRFPICHVYVGDTVVEVSSFSTTGQKFGGDW 172
Query: 1263 KYNVERPIGCEEEDYIRWRNCLERDFTINSLMLDPYAKIVYDYLGGVEDIRNAKVQTVKP 1084
Y+ + PI C+E+DY+RWRNC +RDFTIN LM DPY KIVYDY+GG+EDIR AKV+TV P
Sbjct: 173 NYDTQSPIDCDEKDYMRWRNCSQRDFTINGLMFDPYEKIVYDYIGGLEDIRKAKVRTVTP 232
Query: 1083 SHISLSEDSARILRGIRIASRLRFGFARETARDVIDLSFSVLNLDKGRLLMEMNYMLAYG 904
+ S ED ARILR +RIA+RL F F+RETA + + S+L LDKGRLLMEMNYMLAYG
Sbjct: 233 ASNSFQEDCARILRAVRIAARLGFRFSRETAHFLKHFAHSILRLDKGRLLMEMNYMLAYG 292
Query: 903 SAESSXXXXXXXXXXXXXLPIQAAYFARSGFRRRDKRSNMLLCLFSHMDKFLAPDMPCHS 724
S+E+S LPIQAAYF GF+RRDKRSNMLL L S+MDK LAPD PCHS
Sbjct: 293 SSEASLRLLWKFGLLEILLPIQAAYFVHCGFKRRDKRSNMLLSLLSNMDKLLAPDRPCHS 352
Query: 723 SLWVAILAFHKALSDEPRDPAVIAAFSLAVYNGGDISEALNIARTITRPHDVKLNELLEP 544
LW+ ILAFHKALS++PRDP V+AAF LAV+NGGD+SEA+NIA+ I +PHD+ +EL +P
Sbjct: 353 CLWIGILAFHKALSEQPRDPLVVAAFCLAVHNGGDMSEAVNIAKRIDKPHDMSFHELCKP 412
Query: 543 CNMDREELKEEVMHFDAAVKRALSCLTDEYYVSQAMASFPKAPKSDLVFIPLQLYLRAYR 364
+MD ++L +EVM ++KR LS +TDE+YVSQAMA +P+AP SDLVFI LYLR R
Sbjct: 413 GDMDTDQLVDEVMDLAQSIKRVLSMMTDEHYVSQAMAEYPQAPYSDLVFISFALYLRVGR 472
Query: 363 IFECVKDGKRKGFAAKHGSKIDNELLTLGSLQEVRHVFARIVFDTIYPV 217
+FECV+ GK KGF K G KI+ +LL LGSL+EVRH FARIVFDT+YP+
Sbjct: 473 VFECVRQGKEKGFVPKQGGKINYQLLALGSLKEVRHTFARIVFDTVYPL 521
>ref|XP_002266814.1| PREDICTED: CCA-adding enzyme [Vitis vinifera]
gi|296088167|emb|CBI35659.3| unnamed protein product
[Vitis vinifera]
Length = 537
Score = 619 bits (1597), Expect = e-175
Identities = 320/539 (59%), Positives = 397/539 (73%), Gaps = 2/539 (0%)
Frame = -3
Query: 1788 MAIAVGFGFSCRPHLPLRHHFCHCVRKVRFGSVAAVIDEPDSFLKGCNSSTEXXXXXXXX 1609
MAIAV GFSCR +L R +CV KVR S A ++ P + G E
Sbjct: 1 MAIAV-LGFSCRSYLTFRRPLVYCVHKVRHRSNVATVESPPEPV-GVTKEEEPHWATSDG 58
Query: 1608 XXXDCTKAPVWKRFTSKELGISNKMIPRPIRVVLNGLNKKGFKVYLVGGCVRDLILKQKP 1429
+KAP WK+ SK+LGI MI +P R VLNGL KKG++VYLVGGCVRDLILK+ P
Sbjct: 59 RGNGASKAPEWKKLNSKDLGIRTSMIAKPTRYVLNGLKKKGYEVYLVGGCVRDLILKRTP 118
Query: 1428 KDFDVLTSAELHEVKWTFPQCQMIGRRFPICHVTVDGTIVEVSSFSTSA-RSGRKVKYNV 1252
KDFD++TSAEL EV FP+C+++G+RFPICHV V+ TIVEVSSFSTS R+GRK+ Y +
Sbjct: 119 KDFDIITSAELKEVLRAFPRCEVVGKRFPICHVHVNDTIVEVSSFSTSGKRTGRKLDYIL 178
Query: 1251 ERPIGCEEEDYIRWRNCLERDFTINSLMLDPYAKIVYDYLGGVEDIRNAKVQTVKPSHIS 1072
RP C++ DYIRWRNCL+RDFTIN LM DPY KIVYDY+GG++DI+ AKV+TV P++IS
Sbjct: 179 RRPPDCDDHDYIRWRNCLQRDFTINGLMFDPYTKIVYDYMGGMQDIKKAKVRTVIPANIS 238
Query: 1071 LSEDSARILRGIRIASRLRFGFARETARDVIDLSFSVLNLDKGRLLMEMNYMLAYGSAES 892
ED ARILRG+RIA+RL F F ++ A V +LS SVL LDKGR+LMEMNYMLAYGSAE+
Sbjct: 239 FVEDCARILRGVRIAARLGFRFTKDIAHSVRELSCSVLRLDKGRILMEMNYMLAYGSAEA 298
Query: 891 SXXXXXXXXXXXXXLPIQAAYFARSGFRRRDKRSNMLLCLFSHMDKFLAPDMPCHSSLWV 712
S LPIQAAY GFRRRD+RSNMLL LFS++D+ +APD PCH+SLW+
Sbjct: 299 SLRLLWKFGLLEILLPIQAAYLVSQGFRRRDQRSNMLLSLFSNLDRLVAPDRPCHNSLWI 358
Query: 711 AILAFHKALSDEPRDPAVIAAFSLAVYNGGDISEALNIARTITRPHDVKLNELLEPCNMD 532
+LAFHKAL D+PR P V+AAFSLAV+NGG +SEA+ IAR I++PHD +ELLEP ++D
Sbjct: 359 GMLAFHKALVDQPRHPMVVAAFSLAVHNGGSLSEAVEIARRISQPHDQSFSELLEPQDLD 418
Query: 531 REE-LKEEVMHFDAAVKRALSCLTDEYYVSQAMASFPKAPKSDLVFIPLQLYLRAYRIFE 355
+E L +E+M A+VK AL +TDE++VSQAM+ +P+AP SDLVFI L +LRA +IF+
Sbjct: 419 SDESLIDEIMDLAASVKSALMKMTDEHFVSQAMSKYPRAPYSDLVFISLASFLRASKIFQ 478
Query: 354 CVKDGKRKGFAAKHGSKIDNELLTLGSLQEVRHVFARIVFDTIYPVVSTSQ**NFENIN 178
CV+ G KGF K GS+ID E L LGSL+EVRHVFARIVFDT+YP +S + NF N N
Sbjct: 479 CVQGGAEKGFVPKQGSRIDYEFLALGSLREVRHVFARIVFDTVYP-LSLNTEDNFVNQN 536
>ref|XP_002318161.1| predicted protein [Populus trichocarpa] gi|222858834|gb|EEE96381.1|
predicted protein [Populus trichocarpa]
Length = 515
Score = 615 bits (1585), Expect = e-173
Identities = 316/530 (59%), Positives = 391/530 (73%), Gaps = 6/530 (1%)
Frame = -3
Query: 1788 MAIAVGFGFSCRPHLPLRHHFCHCVRKVRFGSVAAV--IDEPDSFLKGCNSSTEXXXXXX 1615
MAI+ F+CRP PLR H ++KVRF SVAA+ +D ++ +KG + +
Sbjct: 1 MAIS-SLSFACRPGFPLRPSLFHRIQKVRFSSVAAIETLDVQENVIKGNSRNLGDC---- 55
Query: 1614 XXXXXDCTKAPVWKRFTSKELGISNKMIPRPIRVVLNGLNKKGFKVYLVGGCVRDLILKQ 1435
KAP WK+ +SKELG+SN +I P + VLNGL K G++VYLVGGCVRDLILK+
Sbjct: 56 --------KAPEWKKLSSKELGLSNSLISMPTKKVLNGLKKNGYEVYLVGGCVRDLILKR 107
Query: 1434 KPKDFDVLTSAELHEVKWTFPQCQMIGRRFPICHVTVDGTIVEVSSFSTSARSGRKVKYN 1255
PKDFD++TSAEL EV TF C+++G+ FPICHV V TIVEVSSFST+ GRK K +
Sbjct: 108 IPKDFDIITSAELKEVVRTFSHCEIVGKWFPICHVHVGDTIVEVSSFSTT---GRKFKVD 164
Query: 1254 VER----PIGCEEEDYIRWRNCLERDFTINSLMLDPYAKIVYDYLGGVEDIRNAKVQTVK 1087
+ PI C+E+DY+RW+NCL+RDFTIN LM DPY +IVYDY+GG+EDI+ AKV+TV
Sbjct: 165 LRNDIICPIDCDEKDYVRWKNCLQRDFTINGLMFDPYKRIVYDYMGGLEDIKKAKVRTVI 224
Query: 1086 PSHISLSEDSARILRGIRIASRLRFGFARETARDVIDLSFSVLNLDKGRLLMEMNYMLAY 907
P+ IS ED ARILR +RIA+RL F F RETA V +LS +L LDK R++MEMNYMLAY
Sbjct: 225 PAGISFQEDCARILRAVRIAARLGFRFTRETAHFVKNLSRLLLRLDKPRIMMEMNYMLAY 284
Query: 906 GSAESSXXXXXXXXXXXXXLPIQAAYFARSGFRRRDKRSNMLLCLFSHMDKFLAPDMPCH 727
GSAE+S LPIQAAYF R GF+RRDKRSNMLLCLFS++DK LAPD PCH
Sbjct: 285 GSAEASLRILWKFGLLELLLPIQAAYFVRDGFKRRDKRSNMLLCLFSNLDKLLAPDRPCH 344
Query: 726 SSLWVAILAFHKALSDEPRDPAVIAAFSLAVYNGGDISEALNIARTITRPHDVKLNELLE 547
SSLWV ILAFHKAL+D+PRDP V+AAF LAV+NGGDI +N+AR IT+PHD+ +EL +
Sbjct: 345 SSLWVGILAFHKALADQPRDPMVVAAFCLAVHNGGDILGGVNMARKITKPHDISFHELTK 404
Query: 546 PCNMDREELKEEVMHFDAAVKRALSCLTDEYYVSQAMASFPKAPKSDLVFIPLQLYLRAY 367
P ++D + L +EV+ F A+VK+ L+ +TDEYYVS AMA +P+AP SDLVF PL +YLR
Sbjct: 405 PQDLDSKMLIDEVVDFAASVKQVLNWMTDEYYVSLAMAEYPQAPYSDLVFFPLAVYLRVC 464
Query: 366 RIFECVKDGKRKGFAAKHGSKIDNELLTLGSLQEVRHVFARIVFDTIYPV 217
RIFEC +DG KGF K G KID E+L LG LQEVRH FAR+VFDT+YPV
Sbjct: 465 RIFECSRDGPEKGFLPKQGRKIDYEMLGLGGLQEVRHTFARVVFDTVYPV 514
>ref|XP_002321741.1| predicted protein [Populus trichocarpa] gi|222868737|gb|EEF05868.1|
predicted protein [Populus trichocarpa]
Length = 481
Score = 570 bits (1470), Expect = e-160
Identities = 283/459 (61%), Positives = 349/459 (76%), Gaps = 1/459 (0%)
Frame = -3
Query: 1590 KAPVWKRFTSKELGISNKMIPRPIRVVLNGLNKKGFKVYLVGGCVRDLILKQKPKDFDVL 1411
KA WK++ SKELGISN I RP + VL+GL K G++VYLVGGCVRDLILK+ PKDFD++
Sbjct: 20 KALEWKKWNSKELGISNSTISRPTKKVLDGLKKNGYEVYLVGGCVRDLILKRTPKDFDII 79
Query: 1410 TSAELHEVKWTFPQCQMIGRRFPICHVTVDGTIVEVSSFSTSARSGR-KVKYNVERPIGC 1234
TSAEL EV TFPQC ++G+RFPICHV V TIVEVSSFST+ R + + PI C
Sbjct: 80 TSAELKEVVRTFPQCIIVGKRFPICHVHVGDTIVEVSSFSTTGPKFRLDLSNGISPPIDC 139
Query: 1233 EEEDYIRWRNCLERDFTINSLMLDPYAKIVYDYLGGVEDIRNAKVQTVKPSHISLSEDSA 1054
+E+DY+RW+NCL RD TIN LM DPY +IVYDY+GG+EDI+ AKV+TV P+ S ED A
Sbjct: 140 DEKDYVRWKNCLRRDLTINGLMFDPYKRIVYDYVGGLEDIKKAKVRTVVPASTSFQEDCA 199
Query: 1053 RILRGIRIASRLRFGFARETARDVIDLSFSVLNLDKGRLLMEMNYMLAYGSAESSXXXXX 874
RILR +RIA+RL F F RETA + +LS S+L LD R++MEMNYMLAYGSAE+S
Sbjct: 200 RILRAVRIAARLGFRFTRETAHFIKNLSRSLLRLDNQRIMMEMNYMLAYGSAEASLRILW 259
Query: 873 XXXXXXXXLPIQAAYFARSGFRRRDKRSNMLLCLFSHMDKFLAPDMPCHSSLWVAILAFH 694
LP QAAYF R GF+R+DKRSNMLLCLFS++DK LAPD PCH+SLWV ILAFH
Sbjct: 260 KFGLLELLLPFQAAYFVRDGFKRQDKRSNMLLCLFSNLDKHLAPDRPCHNSLWVGILAFH 319
Query: 693 KALSDEPRDPAVIAAFSLAVYNGGDISEALNIARTITRPHDVKLNELLEPCNMDREELKE 514
KALSD+PRDP V+AAF LAV+NGGDI + + + T+PHDV +EL EP N++ E L +
Sbjct: 320 KALSDQPRDPMVVAAFCLAVHNGGDILGGVKMVKKFTKPHDVSFHELSEPQNLNSEALVD 379
Query: 513 EVMHFDAAVKRALSCLTDEYYVSQAMASFPKAPKSDLVFIPLQLYLRAYRIFECVKDGKR 334
EV+ F A+VK+ L +TDEY VSQAMA +P+AP SDLVF PL +YL+ RIFEC ++G +
Sbjct: 380 EVVDFAASVKQVLYWMTDEYCVSQAMAEYPQAPCSDLVFFPLAVYLKVCRIFECSREGSQ 439
Query: 333 KGFAAKHGSKIDNELLTLGSLQEVRHVFARIVFDTIYPV 217
K F K G KI+ E+L LGSLQEVRH FAR+VFDT++P+
Sbjct: 440 KVFMPKQGRKINYEMLALGSLQEVRHTFARVVFDTVFPL 478
>ref|NP_197758.2| Polynucleotide adenylyltransferase family protein [Arabidopsis
thaliana] gi|332005816|gb|AED93199.1| Polynucleotide
adenylyltransferase family protein [Arabidopsis thaliana]
Length = 527
Score = 565 bits (1456), Expect = e-158
Identities = 304/531 (57%), Positives = 380/531 (71%), Gaps = 7/531 (1%)
Frame = -3
Query: 1788 MAIAVGFGFSCRPHLPLRHHFCHCVRKVRFGSVAAVI---DEPDSFLKGCNSSTEXXXXX 1618
MAI+ GF+CR P+R HC+ K+RF +VAA I DE D F + +
Sbjct: 1 MAIS-SVGFACRSFSPVRTLQSHCLWKIRFNTVAAAIETMDESDGFATDSDRQDKVSDEP 59
Query: 1617 XXXXXXDCTKAPVWKRFTSKELGISNKMIPRPIRVVLNGLNKKGFKVYLVGGCVRDLILK 1438
WK+ SK+LG+S+ MI + R VLNGL KG VYLVGGCVRDLILK
Sbjct: 60 RDRE---------WKQLNSKDLGLSSSMIAKSTRKVLNGLKSKGHDVYLVGGCVRDLILK 110
Query: 1437 QKPKDFDVLTSAELHEVKWTFPQCQMIGRRFPICHVTVDGTIVEVSSFSTSAR-SGRKVK 1261
+ PKDFD+LTSAEL EV TFP+C+++GRRFPICHV + ++EVSSFSTSA+ S R +
Sbjct: 111 RTPKDFDILTSAELREVVRTFPRCEIVGRRFPICHVHIGDDLIEVSSFSTSAQNSSRNTR 170
Query: 1260 YNVERPIGCE-EEDYIRWRNCLERDFTINSLMLDPYAKIVYDYLGGVEDIRNAKVQTVKP 1084
+ G + +ED IR NCL+RDFTIN LM DPYAK+VYDYLGG+EDIR AKV+TV
Sbjct: 171 TECKESSGSDGDEDCIRLNNCLQRDFTINGLMFDPYAKVVYDYLGGMEDIRKAKVRTVIH 230
Query: 1083 SHISLSEDSARILRGIRIASRLRFGFARETARDVIDLSFSVLNLDKGRLLMEMNYMLAYG 904
+ S +D ARILR IRIA+RL F ++ETA + +LS V LDKGR+LMEMNYMLAYG
Sbjct: 231 AGTSFHQDCARILRAIRIAARLGFRMSKETAHFIKNLSLLVQRLDKGRILMEMNYMLAYG 290
Query: 903 SAESSXXXXXXXXXXXXXLPIQAAYFARSGFRRRDKRSNMLLCLFSHMDKFLAPDMPCHS 724
SAE+S LPIQAAY ARSGFRRRDKR+NMLL LF+++DK LAPD PCHS
Sbjct: 291 SAEASLRLLWKFGILEILLPIQAAYLARSGFRRRDKRTNMLLSLFANLDKLLAPDRPCHS 350
Query: 723 SLWVAILAFHKALSDEPRDPAVIAAFSLAVYNGGDISEALNIARTITRPHDVKLNELLEP 544
SLW+AILAFHKAL+D+PR P V+AAFSLAV+N GDI EA+ I + ITRPHD EL+EP
Sbjct: 351 SLWIAILAFHKALADKPRSPIVVAAFSLAVHNCGDILEAVEITKKITRPHDKSFFELVEP 410
Query: 543 -CNMDREELKEEVMHFDAAVKRALSCLTDEYYVSQAMASFPKAPKSDLVFIPLQLYLRAY 367
N+D + L +EVM DA+++ AL+ +TD Y++S+AM+++P+AP SDLVFIPLQLYLRA
Sbjct: 411 EENLDFQTLLDEVMDLDASIEDALNQMTDAYFISKAMSAYPQAPYSDLVFIPLQLYLRAG 470
Query: 366 RIFECVKDGK-RKGFAAKHGSKIDNELLTLGSLQEVRHVFARIVFDTIYPV 217
RIF+CVK+ + R GF AK GSKI+ L G E+RHVFAR+VFDT++P+
Sbjct: 471 RIFDCVKNEETRIGFEAKQGSKIEYGSLNSGYFPEIRHVFARVVFDTVFPL 521