BLASTX nr result

ID: Bupleurum21_contig00014529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014529
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002513024.1| conserved hypothetical protein [Ricinus comm...    55   6e-06
ref|XP_002520664.1| conserved hypothetical protein [Ricinus comm...    55   6e-06

>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
 Frame = +3

Query: 6   RSLKNHIIPFLQLLSTALGNYQNAVSAVKCRPFLLAYN-TPCLLDHVNLLQTVGVPQTLI 182
           RSL+N I+P    L T L + +  VSA K   ++   + +  L+ ++ LL+ VGVPQ+ I
Sbjct: 159 RSLENQIVPSYNFLKTILRSDEKIVSAFKRTTWIFLEDLSKNLIPNLELLRKVGVPQSCI 218

Query: 183 FQIMKVYVDPLGNGHDVFRSAVLKVKDMGFDPKSWPFVRAVTAM 314
             ++  + + +   H+ F   V +V+ MGFDP    FV AV A+
Sbjct: 219 SLLLTHFPEAMMENHEEFSENVEEVRKMGFDPNKSTFVLAVHAL 262


>ref|XP_002513024.1| conserved hypothetical protein [Ricinus communis]
           gi|223548035|gb|EEF49527.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1520

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
 Frame = +3

Query: 6   RSLKNHIIPFLQLLSTALGNYQNAVSAVKCRPFLLAYNTPC-LLDHVNLLQTVGVPQTLI 182
           RSL+N +IP          + +  ++A+K  P +L       ++ ++N L   GVP + I
Sbjct: 107 RSLENQLIPSFNFFRDFHHSDEKTIAAIKRYPIILTRRLEADVIPNINTLHEYGVPASKI 166

Query: 183 FQIMKVYVDPLGNGHDVFRSAVLKVKDMGFDPKSWPFVRAVTAM 314
             ++  +   +G   D F+  V +VK MGFDP    FV A+ A+
Sbjct: 167 LMLVHYFPQKIGMEADKFKKIVEEVKKMGFDPLKSQFVSAIIAL 210


>ref|XP_002520664.1| conserved hypothetical protein [Ricinus communis]
           gi|223540049|gb|EEF41626.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
 Frame = +3

Query: 6   RSLKNHIIPFLQLLSTALGNYQNAVSAVKCRPFL-LAYNTPCLLDHVNLLQTVGVPQTLI 182
           RSL+N IIP    L + L + +  VSA+K   ++ L  ++  L+ ++ LL+  GV  + I
Sbjct: 160 RSLENQIIPSYNFLKSILLSDEKIVSALKRTTWIFLEDHSKNLIPNIELLREAGVLHSCI 219

Query: 183 FQIMKVYVDPLGNGHDVFRSAVLKVKDMGFDPKSWPFVRAVTAM 314
             ++  + + L   HD F   V +V++M FDPK   FV AV A+
Sbjct: 220 SLLLTHFPEALMQRHDKFSKIVKEVREMEFDPKKSTFVLAVHAI 263


Top