BLASTX nr result

ID: Bupleurum21_contig00014484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014484
         (1371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACA53387.2| plastid terminal oxidase [Daucus carota]               575   e-161
ref|NP_001234511.1| plastid quinol oxidase [Solanum lycopersicum...   499   e-139
ref|XP_002518411.1| Alternative oxidase 4, chloroplast precursor...   493   e-137
gb|AAG02288.1|AF177981_1 plastid terminal oxidase [Capsicum annuum]   493   e-137
gb|ABB70513.1| plastid terminal oxidase [Coffea canephora]            483   e-134

>gb|ACA53387.2| plastid terminal oxidase [Daucus carota]
          Length = 365

 Score =  575 bits (1481), Expect = e-161
 Identities = 277/319 (86%), Positives = 291/319 (91%)
 Frame = -2

Query: 1055 PQTCAAPSIRSVSRNLFIVHATTLQEDEEKVVVEDSFQPKSSPAGDGSRSNGEPPDXXXX 876
            PQ+C+A S  S SR LF V A  LQE+EEKVVVEDSFQPKSSP  DGS S+ EPPD    
Sbjct: 45   PQSCSASSHPSFSRKLFKVQARILQENEEKVVVEDSFQPKSSPEVDGSGSDREPPDGSSS 104

Query: 875  SGIEKWVIKLEQSINILLTDSVIKILDTLYRDRDYARFFVLETIARVPYFAFMSVLHMYE 696
            SGIE+WVIKLEQSINILLTDSVIKILDTLY DRDYARFFVLETIARVPYFAFMSVLHMYE
Sbjct: 105  SGIERWVIKLEQSINILLTDSVIKILDTLYHDRDYARFFVLETIARVPYFAFMSVLHMYE 164

Query: 695  SFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAWWFDRFLSQHIAIFYYFMTAFMYTL 516
            SFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAWWFDRFLSQHIA+FYYFM AFMY L
Sbjct: 165  SFGWWRRADYLKVHFAESWNEMHHLLIMEELGGNAWWFDRFLSQHIAVFYYFMAAFMYLL 224

Query: 515  SPRMAYHFSECVENHAFETYDKFIKARGDELKKLPPSKVALKYYTEGDMYLFDEFQTSRV 336
            SPRMAYHFSECVE+HAFETYDKFI A+G++LKKLP SKVA+KYYTEGDMYLFDEFQTSR 
Sbjct: 225  SPRMAYHFSECVEHHAFETYDKFINAKGEDLKKLPASKVAIKYYTEGDMYLFDEFQTSRA 284

Query: 335  PNTRRPVIENLYDVFLNIRDDEAEHCKTMKACQTPGSLRSPHSGLDNALEDDAGCILPDT 156
            PNTRRPVI+NLYDVF+NIRDDEAEHCKTMKACQTPG+LRSPHSG DNA EDDAGCILPDT
Sbjct: 285  PNTRRPVIDNLYDVFVNIRDDEAEHCKTMKACQTPGNLRSPHSGFDNAFEDDAGCILPDT 344

Query: 155  SCEGIVDCIKKSVARPQSS 99
            SCEGIVDCIKKSV R  SS
Sbjct: 345  SCEGIVDCIKKSVTRDTSS 363


>ref|NP_001234511.1| plastid quinol oxidase [Solanum lycopersicum]
            gi|9937099|gb|AAG02286.1|AF177979_1 plastid terminal
            oxidase [Solanum lycopersicum]
            gi|9937101|gb|AAG02287.1|AF177980_1 plastid terminal
            oxidase [Solanum lycopersicum]
            gi|10505366|gb|AAG18449.1|AF302931_1 plastid quinol
            oxidase [Solanum lycopersicum]
            gi|10505368|gb|AAG18450.1|AF302932_1 plastid quinol
            oxidase [Solanum lycopersicum]
          Length = 366

 Score =  499 bits (1285), Expect = e-139
 Identities = 239/311 (76%), Positives = 265/311 (85%)
 Frame = -2

Query: 1025 SVSRNLFIVHATTLQEDEEKVVVEDSFQPKSSPAGDGSRSNGEPPDXXXXSGIEKWVIKL 846
            SVSR    V AT LQE+EE+VVVE SF PKS P   G  SNG+PPD    +G+EKWVIKL
Sbjct: 56   SVSRKSCRVRATLLQENEEEVVVEKSFAPKSFPDNVGGGSNGKPPDDSSSNGLEKWVIKL 115

Query: 845  EQSINILLTDSVIKILDTLYRDRDYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADY 666
            EQS+NILLTDSVIKILDTLY +R+YARFFVLETIARVPYFAF+SVLHMYESFGWWRRADY
Sbjct: 116  EQSVNILLTDSVIKILDTLYHNRNYARFFVLETIARVPYFAFISVLHMYESFGWWRRADY 175

Query: 665  LKVHFAESWNEMHHLLIMEELGGNAWWFDRFLSQHIAIFYYFMTAFMYTLSPRMAYHFSE 486
            +KVHFAESWNEMHHLLIMEELGGNAWWFDRFL+QHIAIFYYFMT  MY LSPRMAYHFSE
Sbjct: 176  MKVHFAESWNEMHHLLIMEELGGNAWWFDRFLAQHIAIFYYFMTVLMYALSPRMAYHFSE 235

Query: 485  CVENHAFETYDKFIKARGDELKKLPPSKVALKYYTEGDMYLFDEFQTSRVPNTRRPVIEN 306
            CVE+HA+ETYDKFIK +G+ELK LP  K+A+ YYT GD+YLFDEFQTSR PNTRRP I+N
Sbjct: 236  CVESHAYETYDKFIKDQGEELKNLPAPKIAVDYYTGGDLYLFDEFQTSREPNTRRPKIDN 295

Query: 305  LYDVFLNIRDDEAEHCKTMKACQTPGSLRSPHSGLDNALEDDAGCILPDTSCEGIVDCIK 126
            LYDVF+NIRDDEAEHCKTMKACQT GSLRSPH+   +  EDD GC +P   C GIVDCIK
Sbjct: 296  LYDVFMNIRDDEAEHCKTMKACQTHGSLRSPHTDPCDDSEDDTGCSVPQADCIGIVDCIK 355

Query: 125  KSVARPQSSEK 93
            KSV   Q +++
Sbjct: 356  KSVTDTQVTKR 366


>ref|XP_002518411.1| Alternative oxidase 4, chloroplast precursor, putative [Ricinus
            communis] gi|223542256|gb|EEF43798.1| Alternative oxidase
            4, chloroplast precursor, putative [Ricinus communis]
          Length = 356

 Score =  493 bits (1270), Expect = e-137
 Identities = 231/306 (75%), Positives = 265/306 (86%), Gaps = 3/306 (0%)
 Frame = -2

Query: 1001 VHATTLQEDEEKVVVEDSFQPKS---SPAGDGSRSNGEPPDXXXXSGIEKWVIKLEQSIN 831
            V AT L+E+EEKVV++++FQPKS      G G R+ G+PPD      +E+WVIKLEQS+N
Sbjct: 51   VQATVLRENEEKVVIDETFQPKSFTDDDDGKGGRTGGDPPDT----SLERWVIKLEQSVN 106

Query: 830  ILLTDSVIKILDTLYRDRDYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHF 651
            + LTDSVIKILD  Y DRDYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHF
Sbjct: 107  VFLTDSVIKILDAFYHDRDYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADYLKVHF 166

Query: 650  AESWNEMHHLLIMEELGGNAWWFDRFLSQHIAIFYYFMTAFMYTLSPRMAYHFSECVENH 471
            AESWNEMHHLLIMEELGGN+WWFDRFL+QHIAI YY MT FMY LSPRMAYHFSECVE+H
Sbjct: 167  AESWNEMHHLLIMEELGGNSWWFDRFLAQHIAIIYYIMTVFMYALSPRMAYHFSECVESH 226

Query: 470  AFETYDKFIKARGDELKKLPPSKVALKYYTEGDMYLFDEFQTSRVPNTRRPVIENLYDVF 291
            A+ TYDKFIKA+G+ELKKLP  +VA+KYYTEGD+YLFDEFQTSR P++RRP I+NLYDVF
Sbjct: 227  AYATYDKFIKAQGEELKKLPAPEVAVKYYTEGDLYLFDEFQTSRAPHSRRPKIDNLYDVF 286

Query: 290  LNIRDDEAEHCKTMKACQTPGSLRSPHSGLDNALEDDAGCILPDTSCEGIVDCIKKSVAR 111
            LNIRDDEAEHCKTM+ACQT G+LRSPHS ++N +ED +GCILP+  CEGIVDC+KKS+  
Sbjct: 287  LNIRDDEAEHCKTMRACQTHGNLRSPHSHVENDIEDVSGCILPEADCEGIVDCMKKSLTS 346

Query: 110  PQSSEK 93
              S E+
Sbjct: 347  APSKEE 352


>gb|AAG02288.1|AF177981_1 plastid terminal oxidase [Capsicum annuum]
          Length = 357

 Score =  493 bits (1269), Expect = e-137
 Identities = 235/306 (76%), Positives = 259/306 (84%)
 Frame = -2

Query: 1025 SVSRNLFIVHATTLQEDEEKVVVEDSFQPKSSPAGDGSRSNGEPPDXXXXSGIEKWVIKL 846
            S+SR    V AT L+E+EE+VVVE SF PKS P   G  +NGEPPD    +G+EKWVIK+
Sbjct: 47   SLSRKSSRVRATLLKENEEEVVVEKSFAPKSFPGNVGGGNNGEPPDNSSSNGLEKWVIKI 106

Query: 845  EQSINILLTDSVIKILDTLYRDRDYARFFVLETIARVPYFAFMSVLHMYESFGWWRRADY 666
            EQS+NI LTDSVIKILDTLY DR YARFFVLETIARVPYFAF+SVLH+YESFGWWRRADY
Sbjct: 107  EQSVNIFLTDSVIKILDTLYHDRHYARFFVLETIARVPYFAFISVLHLYESFGWWRRADY 166

Query: 665  LKVHFAESWNEMHHLLIMEELGGNAWWFDRFLSQHIAIFYYFMTAFMYTLSPRMAYHFSE 486
            LKVHFAESWNEMHHLLIMEELGGNAWWFDRFL+QHIA+FYYFMT  MY LSPRMAYHFSE
Sbjct: 167  LKVHFAESWNEMHHLLIMEELGGNAWWFDRFLAQHIAVFYYFMTVSMYALSPRMAYHFSE 226

Query: 485  CVENHAFETYDKFIKARGDELKKLPPSKVALKYYTEGDMYLFDEFQTSRVPNTRRPVIEN 306
            CVE+HA+ETYDKFIK +  ELKKLP  K+A+ YYT GD+YLFDEFQTSR PNTRRP I+N
Sbjct: 227  CVEHHAYETYDKFIKDQEAELKKLPAPKIAVSYYTGGDLYLFDEFQTSREPNTRRPKIDN 286

Query: 305  LYDVFLNIRDDEAEHCKTMKACQTPGSLRSPHSGLDNALEDDAGCILPDTSCEGIVDCIK 126
            LYDVF+NIRDDEAEHCKTMKACQT GSLRSPH+   +  EDD GC +P   C GIVDCI 
Sbjct: 287  LYDVFMNIRDDEAEHCKTMKACQTHGSLRSPHTNPCDESEDDPGCSVPQADCVGIVDCIT 346

Query: 125  KSVARP 108
            KSVA P
Sbjct: 347  KSVADP 352


>gb|ABB70513.1| plastid terminal oxidase [Coffea canephora]
          Length = 351

 Score =  483 bits (1242), Expect = e-134
 Identities = 231/294 (78%), Positives = 254/294 (86%)
 Frame = -2

Query: 1028 RSVSRNLFIVHATTLQEDEEKVVVEDSFQPKSSPAGDGSRSNGEPPDXXXXSGIEKWVIK 849
            R +SRN F V AT LQEDE+KVVVE+SFQ KS P   G   NGEPPD    SG+EKWV+K
Sbjct: 55   RPLSRNSFRVQATVLQEDEQKVVVEESFQSKSYPENGGG-GNGEPPDASSSSGLEKWVVK 113

Query: 848  LEQSINILLTDSVIKILDTLYRDRDYARFFVLETIARVPYFAFMSVLHMYESFGWWRRAD 669
            +EQSINI LTDSVIKILDTLY DR YARFFVLETIARVPYFAFMSVLH+YESFGWWRRAD
Sbjct: 114  IEQSINIFLTDSVIKILDTLYHDRHYARFFVLETIARVPYFAFMSVLHLYESFGWWRRAD 173

Query: 668  YLKVHFAESWNEMHHLLIMEELGGNAWWFDRFLSQHIAIFYYFMTAFMYTLSPRMAYHFS 489
              +VHFAESWNEMHHLLIMEELGGN+WWFDRFL+QHIA+FYYFMT FMY LSPRMAYHFS
Sbjct: 174  LSEVHFAESWNEMHHLLIMEELGGNSWWFDRFLAQHIAVFYYFMTVFMYMLSPRMAYHFS 233

Query: 488  ECVENHAFETYDKFIKARGDELKKLPPSKVALKYYTEGDMYLFDEFQTSRVPNTRRPVIE 309
            ECVE+HAFETYDKFIK +G++LKKLP S VA+KYYTEG++YLFDEFQT+R P +RRP IE
Sbjct: 234  ECVESHAFETYDKFIKDQGEQLKKLPASNVAVKYYTEGNLYLFDEFQTARPPTSRRPKIE 293

Query: 308  NLYDVFLNIRDDEAEHCKTMKACQTPGSLRSPHSGLDNALEDDAGCILPDTSCE 147
            N+YDVFLNIRDDEAEHCKTMKACQT G LRSPHS  D+A E+DAG  LP   CE
Sbjct: 294  NMYDVFLNIRDDEAEHCKTMKACQTHGGLRSPHSYTDDACEEDAGYGLPQADCE 347


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