BLASTX nr result

ID: Bupleurum21_contig00014412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014412
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61487.1| hypothetical protein VITISV_038128 [Vitis vinifera]   194   9e-48
emb|CBI33185.3| unnamed protein product [Vitis vinifera]              190   2e-46
ref|XP_002304971.1| predicted protein [Populus trichocarpa] gi|2...   187   1e-45
ref|XP_002518594.1| Negative regulator of the PHO system, putati...   186   3e-45
ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854...   184   1e-44

>emb|CAN61487.1| hypothetical protein VITISV_038128 [Vitis vinifera]
          Length = 2441

 Score =  194 bits (493), Expect = 9e-48
 Identities = 86/194 (44%), Positives = 129/194 (66%), Gaps = 1/194 (0%)
 Frame = -2

Query: 580  EEVSTEFRVRSTTTLSRIVLNESNGKVQMLTWDQGNHEWLNVWSAPNDPCDYFSRCGTFG 401
            +E S  + + +++  SR++++ S G VQ  TW +  H+W+  WSAP D CD + RCG +G
Sbjct: 2132 DEASVIYTLXNSSFFSRLMVDGS-GHVQRKTWHESXHQWMGFWSAPKDDCDNYGRCGPYG 2190

Query: 400  DCMYN-VREYECKCLPGFELMPPRDQYSKKGSQGCAPRRDRKVCRNGEGFVKVAQVKLPD 224
             C  N    +EC CLPGF+   P D Y + GS GC  +   K+C +GEGFVKV  VK+PD
Sbjct: 2191 SCNANSAPNFECTCLPGFQPKSPSDWYLRDGSAGCVRKAGAKLCGSGEGFVKVRSVKIPD 2250

Query: 223  TTKTRLDMNLNKKGCADLCLKNCSCRGYSAADVSEATFKGCITWYNDLVDLREYTSGGQD 44
            T++ R++M++  + C + CL+NC+C GY++A+VS     GC++W+  L+D R+YT GGQD
Sbjct: 2251 TSEARVEMSMGMEACREECLRNCNCSGYTSANVSGGE-SGCVSWHGVLMDTRDYTEGGQD 2309

Query: 43   FYIRVDAAELAKYT 2
             ++RVDAA LA+ T
Sbjct: 2310 LFVRVDAAVLAENT 2323



 Score =  108 bits (271), Expect = 5e-22
 Identities = 64/178 (35%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
 Frame = -2

Query: 544 TTLSRIVLNESNGKVQMLTWDQGNHEWLNVWSAPNDPCD-YFSRCGTFGDCMYNVREYEC 368
           +T+SR VLN+S G +Q + W+     W ++ +     CD  +  CG +G C   V +  C
Sbjct: 249 STVSRFVLNQS-GLIQHIVWNPRIGAWKDIITLNGHECDDNYGMCGPYGICKL-VDQTIC 306

Query: 367 KCLPGFELMPPRDQYSKKGSQGCAPRRDRKVCRNGEGFVKVAQVKLPDTTKTRLDMNLNK 188
           +C  GF    P+D  +++ S GC  R+    C  GEGF K   +KLPD +     +  + 
Sbjct: 307 ECPFGFTPKSPQDWNARQTSAGCVARKPLN-CTAGEGFRKFKGLKLPDASYLNRTV-ASP 364

Query: 187 KGCADLCLKNCSCRGYSAADVSEATFKGCITWYNDLVDLREYTSGGQDFYIRVDAAEL 14
             C   CL NCSC  Y+  DVS      C+ W+ DL D+R Y  GGQ  +IR+ A+EL
Sbjct: 365 AECEKACLSNCSCVAYANTDVS-----ACVVWFGDLKDIRRYNEGGQVLHIRMAASEL 417



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 32/80 (40%), Positives = 49/80 (61%)
 Frame = -2

Query: 253  VKVAQVKLPDTTKTRLDMNLNKKGCADLCLKNCSCRGYSAADVSEATFKGCITWYNDLVD 74
            V V  VK+PDT+  R++   N K C + CL++CSC  Y++  V+  + + C+TWY +L+D
Sbjct: 820  VMVGNVKVPDTSGARVEKGWNSKACEEACLRDCSCTAYASISVAGKS-RVCLTWYGELID 878

Query: 73   LREYTSGGQDFYIRVDAAEL 14
               Y  GG D Y+ V A +L
Sbjct: 879  TVGYNHGGADLYVWVXAFDL 898


>emb|CBI33185.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  190 bits (482), Expect = 2e-46
 Identities = 81/173 (46%), Positives = 116/173 (67%), Gaps = 1/173 (0%)
 Frame = -2

Query: 517 ESNGKVQMLTWDQGNHEWLNVWSAPNDPCDYFSRCGTFGDCMYN-VREYECKCLPGFELM 341
           + +G VQ  TW +  H+W+  WSAP D CD + RCG +G C  N    +EC CLPGF+  
Sbjct: 3   DGSGHVQRKTWHESGHQWMGFWSAPKDDCDNYGRCGPYGSCNANSAPNFECTCLPGFQPK 62

Query: 340 PPRDQYSKKGSQGCAPRRDRKVCRNGEGFVKVAQVKLPDTTKTRLDMNLNKKGCADLCLK 161
            P D Y + GS GC  +   K+C +GEGFVKV  VK+PDT++ R++M++  + C + CL+
Sbjct: 63  SPSDWYLRDGSAGCVRKAGAKLCGSGEGFVKVRSVKIPDTSEARVEMSMGMEACREECLR 122

Query: 160 NCSCRGYSAADVSEATFKGCITWYNDLVDLREYTSGGQDFYIRVDAAELAKYT 2
           NC+C GY++A+VS     GC++W+  L+D R+YT GGQD ++RVDAA LA+ T
Sbjct: 123 NCNCSGYTSANVSGGE-SGCVSWHGVLMDTRDYTEGGQDLFVRVDAAVLAENT 174


>ref|XP_002304971.1| predicted protein [Populus trichocarpa] gi|222847935|gb|EEE85482.1|
           predicted protein [Populus trichocarpa]
          Length = 793

 Score =  187 bits (474), Expect = 1e-45
 Identities = 86/192 (44%), Positives = 124/192 (64%), Gaps = 1/192 (0%)
 Frame = -2

Query: 586 NTEEVSTEFRVRSTTTLSRIVLNESNGKVQMLTWDQGNHEWLNVWSAPNDPCDYFSRCGT 407
           + +EVS  + + + + +SR+V+NES G VQ LTW+  + +W  +W AP +PCD + +CG 
Sbjct: 239 SVDEVSYSYSINNPSLISRMVVNES-GVVQRLTWNDPDKQWFGIWYAPKEPCDTYGQCGP 297

Query: 406 FGDC-MYNVREYECKCLPGFELMPPRDQYSKKGSQGCAPRRDRKVCRNGEGFVKVAQVKL 230
             +C  Y    + CKCLPGFE   P++ Y ++GS+GC  + +   C  GEGFVK+A+VK+
Sbjct: 298 NSNCDPYQTNNFMCKCLPGFEPKSPQEWYLREGSRGCVRKPNVSTCHGGEGFVKLARVKV 357

Query: 229 PDTTKTRLDMNLNKKGCADLCLKNCSCRGYSAADVSEATFKGCITWYNDLVDLREYTSGG 50
           PDT+    +M+L  K CA  CL+NCSC  Y++AD       GC+ WY DLVD R ++  G
Sbjct: 358 PDTSMASANMSLRLKECARECLRNCSCTAYASADERGL---GCLRWYGDLVDTRTFSDVG 414

Query: 49  QDFYIRVDAAEL 14
           Q+ YIRVD AEL
Sbjct: 415 QEIYIRVDRAEL 426


>ref|XP_002518594.1| Negative regulator of the PHO system, putative [Ricinus communis]
            gi|223542439|gb|EEF43981.1| Negative regulator of the PHO
            system, putative [Ricinus communis]
          Length = 1480

 Score =  186 bits (471), Expect = 3e-45
 Identities = 93/197 (47%), Positives = 125/197 (63%), Gaps = 3/197 (1%)
 Frame = -2

Query: 586  NTE-EVSTEFRVRSTTTL-SRIVLNESNGKVQMLTWDQGNHEWLNVWSAPNDPCDYFSRC 413
            NTE EV   + + +  T+ SR+++NES G VQ  TW+  +  W+  WSAP +PCD +  C
Sbjct: 880  NTEDEVFITYGLTTNATIFSRMMVNES-GTVQRATWNDRDGRWIGFWSAPKEPCDNYGEC 938

Query: 412  GTFGDC-MYNVREYECKCLPGFELMPPRDQYSKKGSQGCAPRRDRKVCRNGEGFVKVAQV 236
            G   +C  Y+   + CKCLPGF    P   Y + GS GC  +     CR+GEGFV++A V
Sbjct: 939  GANSNCDPYDSDNFICKCLPGFYPKSPGSWYLRDGSDGCNRKAGVSTCRDGEGFVRLALV 998

Query: 235  KLPDTTKTRLDMNLNKKGCADLCLKNCSCRGYSAADVSEATFKGCITWYNDLVDLREYTS 56
            K+PDT   R++M+L+ K C   CL+NCSC  Y++A  S     GC+TWY DLVD+R Y+S
Sbjct: 999  KVPDTATARVNMSLSLKACEQECLRNCSCTAYTSAYESGI---GCLTWYGDLVDIRTYSS 1055

Query: 55   GGQDFYIRVDAAELAKY 5
             GQD Y+RVDA ELAKY
Sbjct: 1056 VGQDIYVRVDAVELAKY 1072



 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 47/129 (36%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
 Frame = -2

Query: 388 NVREYECKCLPGFELMPPRDQYSKKGSQGCAPRR--DRKVCRNGEGFVKVAQVKLPDTTK 215
           N  ++EC CLPG E   PRD Y +  + GC  +R      C +GEGFVK           
Sbjct: 241 NPDKFECSCLPGCEPKSPRDWYLRDAAGGCIRKRLESSSTCGHGEGFVK----------- 289

Query: 214 TRLDMNLNKKGCADLCLKNCSCRGYSAADVSEATFKGCITWYNDLVDLREYTSGGQDFYI 35
                N++   C   CL+NCSC  Y+  +  E   +GC+ WY +L+++ +   G  D Y+
Sbjct: 290 ---GTNMSSMECEQECLRNCSCSAYANVENGEKE-RGCLIWYWELINMVDIVDGEADVYV 345

Query: 34  RVDAAELAK 8
           RVDA ELA+
Sbjct: 346 RVDAVELAE 354


>ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854728 [Vitis vinifera]
          Length = 2807

 Score =  184 bits (467), Expect = 1e-44
 Identities = 88/191 (46%), Positives = 122/191 (63%)
 Frame = -2

Query: 586  NTEEVSTEFRVRSTTTLSRIVLNESNGKVQMLTWDQGNHEWLNVWSAPNDPCDYFSRCGT 407
            N +E+S  F + + + LSR+ + E +G +Q  TW +   +W + ++ P D CD + RCG 
Sbjct: 2210 NQDEISYMFVMANASVLSRMTV-ELDGYLQRYTWQETEGKWFSFYTVPRDQCDRYGRCGL 2268

Query: 406  FGDCMYNVREYECKCLPGFELMPPRDQYSKKGSQGCAPRRDRKVCRNGEGFVKVAQVKLP 227
             G+C  +  E+EC CL GFE   PRD   K GS GC  +   KVC NGEGFVKV  VK P
Sbjct: 2269 NGNCDNSRAEFECTCLAGFEPKSPRDWSLKDGSAGCLRKEGAKVCGNGEGFVKVEGVKPP 2328

Query: 226  DTTKTRLDMNLNKKGCADLCLKNCSCRGYSAADVSEATFKGCITWYNDLVDLREYTSGGQ 47
            DT+  R++MN++ + C + CLK CSC GY+AA+VS  +  GC++W+ DLVD R +  GGQ
Sbjct: 2329 DTSVARVNMNMSLEACREGCLKECSCSGYAAANVS-GSGSGCLSWHGDLVDTRVFPEGGQ 2387

Query: 46   DFYIRVDAAEL 14
            D Y+RVDA  L
Sbjct: 2388 DLYVRVDAITL 2398



 Score =  152 bits (383), Expect = 5e-35
 Identities = 81/192 (42%), Positives = 111/192 (57%), Gaps = 1/192 (0%)
 Frame = -2

Query: 580  EEVSTEFRVRSTTTLSRIVLNESNGKVQMLTWDQGNHEWLNVWSAPNDPCDYFSRCGTFG 401
            +EVS EF + +++T S I L  S+G  Q  T D+ NH+ + + SA  DPCD + RCG   
Sbjct: 1528 DEVSMEFTLVNSSTFSSIKLG-SDGLYQRYTLDERNHQLVAIRSAARDPCDNYGRCGLNS 1586

Query: 400  DC-MYNVREYECKCLPGFELMPPRDQYSKKGSQGCAPRRDRKVCRNGEGFVKVAQVKLPD 224
            +C +Y    +EC CL GFE    RD   + GS GC   +    CR+GEGF+K+A V    
Sbjct: 1587 NCDVYTGAGFECTCLAGFEPKSQRDWSLRDGSGGCVRIQGTNTCRSGEGFIKIAGV---- 1642

Query: 223  TTKTRLDMNLNKKGCADLCLKNCSCRGYSAADVSEATFKGCITWYNDLVDLREYTSGGQD 44
                    NLN +GC   CL +C+CR  ++ADVS     GC++WY DL+D+R    GGQD
Sbjct: 1643 --------NLNLEGCKKECLNDCNCRACTSADVSTGG-SGCLSWYGDLMDIRTLAQGGQD 1693

Query: 43   FYIRVDAAELAK 8
             ++RVDA  L K
Sbjct: 1694 LFVRVDAIILGK 1705


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