BLASTX nr result

ID: Bupleurum21_contig00014396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014396
         (1511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278737.2| PREDICTED: uncharacterized protein LOC100263...   353   7e-95
emb|CAN74239.1| hypothetical protein VITISV_043329 [Vitis vinifera]   353   9e-95
ref|XP_002512450.1| conserved hypothetical protein [Ricinus comm...   347   4e-93
ref|XP_002319506.1| predicted protein [Populus trichocarpa] gi|2...   335   1e-89
ref|XP_002330172.1| predicted protein [Populus trichocarpa] gi|2...   331   4e-88

>ref|XP_002278737.2| PREDICTED: uncharacterized protein LOC100263144 [Vitis vinifera]
            gi|296089730|emb|CBI39549.3| unnamed protein product
            [Vitis vinifera]
          Length = 291

 Score =  353 bits (906), Expect = 7e-95
 Identities = 165/269 (61%), Positives = 211/269 (78%), Gaps = 5/269 (1%)
 Frame = -1

Query: 1307 GDSNGVCLSKGGRFAPYANHGKPPRTVSKGPKDLILCRIYRKKTCCDVAQTHPAFISVRK 1128
            G  +GVC+S GGRF P+++ GKPP+ VSKGPKDL LCR++R+KTCCDV+QTHPA +S+R+
Sbjct: 22   GKPDGVCISPGGRFPPFSSEGKPPKKVSKGPKDLTLCRVFRRKTCCDVSQTHPALLSIRR 81

Query: 1127 LATTGEASEDCLLLWEFLECSICDPLVGVQSGPPLICASLCDRLYDACSDAYLSMDAKIQ 948
            LA+TGEAS++CL LWE LECSICDP VGVQ GPP+IC SLCD+++ ACS+AY SMDAK Q
Sbjct: 82   LASTGEASQECLQLWELLECSICDPHVGVQPGPPVICTSLCDKVFQACSNAYFSMDAKRQ 141

Query: 947  VLAPCGMNDFVCGKISQWISNGTELCHAAGFAVKPIN-DIQETSCYGGKGSLDAIAEEWK 771
            VLAPCG+ DFVCG+ S+WISNGT+LCHA GF+VKP +  ++ETSCYGGK SLD+IA+ WK
Sbjct: 142  VLAPCGVGDFVCGRASEWISNGTDLCHAVGFSVKPSDAGMEETSCYGGKASLDSIADSWK 201

Query: 770  SSRFNIP---QEAGVLENFKQWLRETLFNEKISWAVAGMVLTAGLMFTRKKRRH-QSNIQ 603
            +S+   P   +  GVL++F+QW+RE  F+E++SWAV GMVLTAGL+F  K++ H Q    
Sbjct: 202  ASQSETPSKIENVGVLDDFQQWVREMAFSERVSWAVGGMVLTAGLLFLSKRKSHNQRQKL 261

Query: 602  AVIQRNARIRKLDIIKNPNLPDDQANAHG 516
            A IQR A  +KL+   N   P  Q N  G
Sbjct: 262  AAIQRTA--KKLEAKINQKHPVSQGNRRG 288


>emb|CAN74239.1| hypothetical protein VITISV_043329 [Vitis vinifera]
          Length = 358

 Score =  353 bits (905), Expect = 9e-95
 Identities = 165/269 (61%), Positives = 211/269 (78%), Gaps = 5/269 (1%)
 Frame = -1

Query: 1307 GDSNGVCLSKGGRFAPYANHGKPPRTVSKGPKDLILCRIYRKKTCCDVAQTHPAFISVRK 1128
            G  +GVC+S GGRF P+++ GKPP+ VSKGPKDL LCR++R+KTCCDV+QTHPA +S+R+
Sbjct: 89   GKPDGVCISPGGRFPPFSSEGKPPKKVSKGPKDLTLCRVFRRKTCCDVSQTHPALLSIRR 148

Query: 1127 LATTGEASEDCLLLWEFLECSICDPLVGVQSGPPLICASLCDRLYDACSDAYLSMDAKIQ 948
            LA+TGEAS++CL LWE LECSICDP VGVQ GPP+IC SLCD+++ ACS+AY SMDAK Q
Sbjct: 149  LASTGEASQECLQLWELLECSICDPHVGVQPGPPVICTSLCDKVFQACSNAYFSMDAKRQ 208

Query: 947  VLAPCGMNDFVCGKISQWISNGTELCHAAGFAVKPIN-DIQETSCYGGKGSLDAIAEEWK 771
            VLAPCG+ DFVCG+ S+WISNGT+LCHA GF+VKP +  ++ETSCYGGK SLD+IA+ WK
Sbjct: 209  VLAPCGVGDFVCGRASEWISNGTDLCHAVGFSVKPSDAGMEETSCYGGKASLDSIADSWK 268

Query: 770  SSRFNIP---QEAGVLENFKQWLRETLFNEKISWAVAGMVLTAGLMFTRKKRRH-QSNIQ 603
            +S+   P   +  GVL++F+QW+RE  F+E++SWAV GMVLTAGL+F  K++ H Q    
Sbjct: 269  ASQSETPSKIKNVGVLDDFQQWVREMAFSERVSWAVGGMVLTAGLLFLSKRKSHNQRQKL 328

Query: 602  AVIQRNARIRKLDIIKNPNLPDDQANAHG 516
            A IQR A  +KL+   N   P  Q N  G
Sbjct: 329  AAIQRTA--KKLEAKINQKHPVSQGNRRG 355


>ref|XP_002512450.1| conserved hypothetical protein [Ricinus communis]
            gi|223548411|gb|EEF49902.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 306

 Score =  347 bits (891), Expect = 4e-93
 Identities = 163/272 (59%), Positives = 211/272 (77%), Gaps = 8/272 (2%)
 Frame = -1

Query: 1307 GDSNGVCLSKGGRFAPYANHGKPPRTVSKGPKDLILCRIYRKKTCCDVAQTHPAFISVRK 1128
            G  +GVC SKGGRF P+++ GKPP+ +S+G KDL LCR++RKKTCCDVAQT+PA +SVR+
Sbjct: 30   GKHDGVCTSKGGRFPPFSSEGKPPKKISRGSKDLTLCRVFRKKTCCDVAQTYPALLSVRR 89

Query: 1127 LATTGEASEDCLLLWEFLECSICDPLVGVQSGPPLICASLCDRLYDACSDAYLSMDAKIQ 948
            LA+ GEAS++CL LWE LECSICDP +G+Q GPPLIC+S CDR+Y+AC+ AY SM+AK Q
Sbjct: 90   LASAGEASQECLQLWELLECSICDPNIGIQPGPPLICSSFCDRVYEACATAYFSMEAKTQ 149

Query: 947  VLAPCGMNDFVCGKISQWISNGTELCHAAGFAVKPIND----IQETSCYGGKGSLDAIAE 780
            VLAPCG+N+FVCGK ++W+SNGTELCH+AGFAVK  +D     +   CYGG+ SLD+IAE
Sbjct: 150  VLAPCGVNEFVCGKAAEWVSNGTELCHSAGFAVKVADDTYHGTEGAFCYGGRASLDSIAE 209

Query: 779  EWKSSRFNIPQEA---GVLENFKQWLRETLFNEKISWAVAGMVLTAGLMFTRKKRRH-QS 612
             WK+SR  +PQ+A   G LE+F+QW++E  F+EK+SWAV GMVLTAGL+F  K++ + Q 
Sbjct: 210  SWKASRSELPQKAGNLGALEDFQQWVQELPFSEKVSWAVGGMVLTAGLLFLSKRKSYSQR 269

Query: 611  NIQAVIQRNARIRKLDIIKNPNLPDDQANAHG 516
               A IQR A  R+LD   N + P+ Q N  G
Sbjct: 270  QKLAAIQRTA--RRLDGKMNQSSPESQGNRKG 299


>ref|XP_002319506.1| predicted protein [Populus trichocarpa] gi|222857882|gb|EEE95429.1|
            predicted protein [Populus trichocarpa]
          Length = 282

 Score =  335 bits (860), Expect = 1e-89
 Identities = 160/273 (58%), Positives = 208/273 (76%), Gaps = 9/273 (3%)
 Frame = -1

Query: 1307 GDSNGVCLSKGGRFAPYANHGKPPRTVSKGPKDLILCRIYRKKTCCDVAQTHPAFISVRK 1128
            G +  VC+SKGGRF PY++ GKPP+ V KG +DL LCR++ KKTCCDVAQT+PA +SVR+
Sbjct: 8    GKNARVCVSKGGRFPPYSSEGKPPKKVGKGARDLTLCRLFHKKTCCDVAQTYPASLSVRR 67

Query: 1127 LATTGEASEDCLLLWEFLECSICDPLVGVQSGPPLICASLCDRLYDACSDAYLSMDAKIQ 948
            LA+TGEAS++CL LWE LECSICDP +GVQ GPPLICAS CDR+Y AC+ AY SMDA  +
Sbjct: 68   LASTGEASQECLQLWELLECSICDPQIGVQPGPPLICASFCDRVYQACASAYFSMDANKR 127

Query: 947  VLAPCGMNDFVCGKISQWISNGTELCHAAGFAVKPIND----IQETSCYGGKGSLDAIAE 780
            V+APCG+NDFVCG+ ++W+SNGTELCHAAGFAVK ++D    ++E SCYGG+ SLD+I++
Sbjct: 128  VIAPCGVNDFVCGQAAEWVSNGTELCHAAGFAVK-LSDANVGVEEVSCYGGRASLDSISD 186

Query: 779  EWKSSRFNIPQEA---GVLENFKQWLRETLFNEKISWAVAGMVLTAGLMFTRKKRRH-QS 612
             W+S +    Q+    GV+E+F+QW++E  F+EK+SWAV G+VLTAGL+F  K++ H Q 
Sbjct: 187  SWRSPQSEFTQKVENLGVVEDFQQWVQEMQFSEKVSWAVGGLVLTAGLLFMSKRKSHGQR 246

Query: 611  NIQAVIQRNA-RIRKLDIIKNPNLPDDQANAHG 516
               A IQR A   R+LD   + N PD   N  G
Sbjct: 247  QKLAAIQRAAIAARRLDGRMSQNSPDSLVNRKG 279


>ref|XP_002330172.1| predicted protein [Populus trichocarpa] gi|222871628|gb|EEF08759.1|
            predicted protein [Populus trichocarpa]
          Length = 285

 Score =  331 bits (848), Expect = 4e-88
 Identities = 162/271 (59%), Positives = 200/271 (73%), Gaps = 7/271 (2%)
 Frame = -1

Query: 1307 GDSNGVCLSKGGRFAPYANHGKPPRTVSKGPKDLILCRIYRKKTCCDVAQTHPAFISVRK 1128
            G + GVCLSKGGRF PY + GKPP+ VSKG KDL LCR++RKKTCCDVAQT+PA +SVR+
Sbjct: 24   GKNAGVCLSKGGRFPPYTSEGKPPKKVSKGAKDLTLCRVFRKKTCCDVAQTYPALLSVRR 83

Query: 1127 LATTGEASEDCLLLWEFLECSICDPLVGVQSGPPLICASLCDRLYDACSDAYLSMDAKIQ 948
            LA+TGEAS++CL LWE LECSICDP +GVQ GPPLICAS CDR+Y AC++AY SMDA  +
Sbjct: 84   LASTGEASQECLQLWELLECSICDPQIGVQPGPPLICASFCDRVYQACANAYFSMDANKR 143

Query: 947  VLAPCGMNDFVCGKISQWISNGTELCHAAGFAVKPIND----IQETSCYGGKGSLDAIAE 780
            V+APCG+NDFVCG+ ++W+SNGTELCHAAGFAVK  +D     +E SCYGG+ SLD+IA+
Sbjct: 144  VIAPCGVNDFVCGQAAEWVSNGTELCHAAGFAVKLSDDAYVGAEEASCYGGRASLDSIAD 203

Query: 779  EWKSSRFNIPQE---AGVLENFKQWLRETLFNEKISWAVAGMVLTAGLMFTRKKRRHQSN 609
             W+SSR   PQ+     VLE+F+QW++E  F+EKISWAV G          ++K   Q  
Sbjct: 204  SWRSSRSEFPQKDENLRVLEDFQQWVQEMPFSEKISWAVGG----------KRKSHGQRQ 253

Query: 608  IQAVIQRNARIRKLDIIKNPNLPDDQANAHG 516
              A IQR A  R+LD   + N PD   N  G
Sbjct: 254  KLAAIQRAA--RRLDGKTSQNSPDSLVNRKG 282


Top