BLASTX nr result

ID: Bupleurum21_contig00014385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014385
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317512.1| predicted protein [Populus trichocarpa] gi|2...   228   4e-58
ref|XP_002329147.1| predicted protein [Populus trichocarpa] gi|2...   224   4e-57
ref|XP_002534244.1| WD-repeat protein, putative [Ricinus communi...   224   6e-57
ref|XP_004141232.1| PREDICTED: WD repeat-containing protein 44-l...   220   1e-55
emb|CBI20340.3| unnamed protein product [Vitis vinifera]              220   1e-55

>ref|XP_002317512.1| predicted protein [Populus trichocarpa] gi|222860577|gb|EEE98124.1|
           predicted protein [Populus trichocarpa]
          Length = 882

 Score =  228 bits (581), Expect = 4e-58
 Identities = 107/138 (77%), Positives = 125/138 (90%)
 Frame = +3

Query: 3   GRRSSSATDDSQDVSFHGPERVRVRQYGKSDKELTGLYKTQEIQAHNGSIWAMKFSLDGK 182
           GRRSSSATDDSQDVSFHGPERVRVRQYG+S KEL+ LYK+QEIQAHNGSIW++KFSLDG+
Sbjct: 356 GRRSSSATDDSQDVSFHGPERVRVRQYGRSSKELSALYKSQEIQAHNGSIWSIKFSLDGR 415

Query: 183 YLASAGEDCVIHIWLVVESERKGDLLLDKPEDENLNLLYLTNGFPDPHLASPYLDSHVEK 362
           YLASAGEDCVIHIW V +SERKG+LL++KP+D  LNLL + NG P+P+L SP +DSH+EK
Sbjct: 416 YLASAGEDCVIHIWQVKQSERKGELLMEKPDDGGLNLLLIANGSPEPNLLSPLVDSHLEK 475

Query: 363 KRRGRPSISRKSVSFDHV 416
           KRRGR SISRKS+S DH+
Sbjct: 476 KRRGRSSISRKSLSLDHI 493


>ref|XP_002329147.1| predicted protein [Populus trichocarpa] gi|222869816|gb|EEF06947.1|
           predicted protein [Populus trichocarpa]
          Length = 799

 Score =  224 bits (572), Expect = 4e-57
 Identities = 107/139 (76%), Positives = 124/139 (89%)
 Frame = +3

Query: 3   GRRSSSATDDSQDVSFHGPERVRVRQYGKSDKELTGLYKTQEIQAHNGSIWAMKFSLDGK 182
           GRRSSSATDDSQDVSFHGPERVRVRQYG+  KEL+ LYK+QEIQAHNGSIW++KFSLDG+
Sbjct: 272 GRRSSSATDDSQDVSFHGPERVRVRQYGRPSKELSALYKSQEIQAHNGSIWSIKFSLDGR 331

Query: 183 YLASAGEDCVIHIWLVVESERKGDLLLDKPEDENLNLLYLTNGFPDPHLASPYLDSHVEK 362
           YLASAGEDCVI+IW VVESERKG+LL++KP D  LNLL + NG P+P+L SP +D+H EK
Sbjct: 332 YLASAGEDCVINIWQVVESERKGELLMEKPYDGGLNLLLMANGSPEPNLLSPLVDTHQEK 391

Query: 363 KRRGRPSISRKSVSFDHVI 419
           KRRGR SISRKS+S DH+I
Sbjct: 392 KRRGRSSISRKSLSLDHII 410


>ref|XP_002534244.1| WD-repeat protein, putative [Ricinus communis]
           gi|223525645|gb|EEF28134.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 944

 Score =  224 bits (571), Expect = 6e-57
 Identities = 106/139 (76%), Positives = 119/139 (85%)
 Frame = +3

Query: 3   GRRSSSATDDSQDVSFHGPERVRVRQYGKSDKELTGLYKTQEIQAHNGSIWAMKFSLDGK 182
           GRRSSSATDDSQD SFHGPERVRVRQYGKS KEL+ LYK+QEIQAHNGSIW +KFSLDG+
Sbjct: 416 GRRSSSATDDSQDTSFHGPERVRVRQYGKSFKELSALYKSQEIQAHNGSIWCIKFSLDGR 475

Query: 183 YLASAGEDCVIHIWLVVESERKGDLLLDKPEDENLNLLYLTNGFPDPHLASPYLDSHVEK 362
           YLASAGEDCVIHIW V+E+ERKG+LL+DKPED N N L   NG P+P L SP  + H EK
Sbjct: 476 YLASAGEDCVIHIWQVIETERKGELLIDKPEDGNFNFLLTANGSPEPSLLSPTAEGHYEK 535

Query: 363 KRRGRPSISRKSVSFDHVI 419
           KRRGR SISRKS+S DH++
Sbjct: 536 KRRGRSSISRKSLSLDHIV 554


>ref|XP_004141232.1| PREDICTED: WD repeat-containing protein 44-like [Cucumis sativus]
           gi|449498657|ref|XP_004160597.1| PREDICTED: WD
           repeat-containing protein 44-like [Cucumis sativus]
          Length = 918

 Score =  220 bits (560), Expect = 1e-55
 Identities = 107/139 (76%), Positives = 121/139 (87%)
 Frame = +3

Query: 3   GRRSSSATDDSQDVSFHGPERVRVRQYGKSDKELTGLYKTQEIQAHNGSIWAMKFSLDGK 182
           GRRSSSATDDSQDVSFHGPERVRVRQYGKS KEL+ LYK+QEIQAH+GSIW +KFSLDGK
Sbjct: 389 GRRSSSATDDSQDVSFHGPERVRVRQYGKSSKELSALYKSQEIQAHSGSIWTIKFSLDGK 448

Query: 183 YLASAGEDCVIHIWLVVESERKGDLLLDKPEDENLNLLYLTNGFPDPHLASPYLDSHVEK 362
           YLASAGED +IH+W VVESE+KGDLL++KPED NL+ L+  N  P+P   SP +DSH EK
Sbjct: 449 YLASAGEDRIIHVWQVVESEKKGDLLMEKPEDGNLSFLFAANESPEPTSLSPNVDSHHEK 508

Query: 363 KRRGRPSISRKSVSFDHVI 419
           KRRGR SISRKSVS +HVI
Sbjct: 509 KRRGRSSISRKSVSLEHVI 527


>emb|CBI20340.3| unnamed protein product [Vitis vinifera]
          Length = 749

 Score =  220 bits (560), Expect = 1e-55
 Identities = 106/139 (76%), Positives = 124/139 (89%), Gaps = 1/139 (0%)
 Frame = +3

Query: 3   GRRSSSATDDSQDVSFHGPERVRVRQYGKSDKELTGLYKTQEIQAHNGSIWAMKFSLDGK 182
           GRRSSSATDDSQ+VSFHGPER+RVRQYGKS KELT LYK+QEIQAHNGSIW++KFSLDG+
Sbjct: 245 GRRSSSATDDSQEVSFHGPERIRVRQYGKSCKELTALYKSQEIQAHNGSIWSIKFSLDGR 304

Query: 183 YLASAGEDCVIHIWLVVESERKGDLLLDKPEDENLNLLYLTNGFPDPHLASPYLDSH-VE 359
           YLASAGEDCVIH+W VVE+ERKGDLL +KPED NLNLL++ +G P+P   SP +D++  E
Sbjct: 305 YLASAGEDCVIHVWQVVETERKGDLLTEKPEDGNLNLLFVASGSPEPTSMSPNVDNNSSE 364

Query: 360 KKRRGRPSISRKSVSFDHV 416
           KKRRGR S+SRKSVS DH+
Sbjct: 365 KKRRGRSSVSRKSVSLDHI 383


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