BLASTX nr result
ID: Bupleurum21_contig00014345
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00014345
(1714 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vi... 721 0.0
emb|CBI29799.3| unnamed protein product [Vitis vinifera] 719 0.0
ref|XP_002323271.1| chromatin remodeling complex subunit [Populu... 707 0.0
ref|XP_004161718.1| PREDICTED: LOW QUALITY PROTEIN: DNA helicase... 695 0.0
ref|XP_004142662.1| PREDICTED: DNA helicase INO80-like [Cucumis ... 693 0.0
>ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vinifera]
Length = 1563
Score = 721 bits (1861), Expect = 0.0
Identities = 384/561 (68%), Positives = 438/561 (78%), Gaps = 16/561 (2%)
Frame = +1
Query: 10 NSSNRFFAGNETFGFAHLIDMSAAEISFLATGSFMERLLFTIMRWDRKYLDAMLDLFLEA 189
N+SN + TFGF HL+D+S E++FLATG+FMERLLF IMRWDR++LD +LDL +EA
Sbjct: 987 NNSNGSAVKSGTFGFTHLMDLSPEEVAFLATGTFMERLLFFIMRWDRQFLDGILDLLMEA 1046
Query: 190 ETDGSGCSQIGRDKVRAVTRMLLLPSKADTTFLSR-FATGPWDVPNEALVLSHKDRLLSN 366
E + S + KVRAVTRMLL+PS+++T L R ATG P EALV+ H+DRL +N
Sbjct: 1047 EEEDFSNSHLDSGKVRAVTRMLLMPSRSETNLLRRKLATGLGHAPFEALVVPHQDRLQAN 1106
Query: 367 IRLLHLAYCFIPTTRAPPINAHCSDRNFAYKMVEELDHPWIKRLLLGFARTSNCNGPRKP 546
RL+H Y FIP TRAPPINAHCS+RNFAYK++EEL HPW+KRL +GFARTS+ NGP+KP
Sbjct: 1107 TRLVHATYTFIPRTRAPPINAHCSNRNFAYKLLEELHHPWLKRLFIGFARTSDYNGPKKP 1166
Query: 547 TA-HPLIQEIDSVLPLSQPALQLTYQIFGSCPPMQSFDPAKMLTDSGKLQTLDILLKRLR 723
H LIQEIDS LP+S+PALQLTY+IFGS PPMQSFDPAK+LTDSGKLQTLDILLKRLR
Sbjct: 1167 DVPHHLIQEIDSELPVSKPALQLTYKIFGSSPPMQSFDPAKLLTDSGKLQTLDILLKRLR 1226
Query: 724 AGNHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVKDFQHRSDIFVFLL 903
A NHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMV+DFQ RSDIFVFLL
Sbjct: 1227 AENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQLRSDIFVFLL 1286
Query: 904 STRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKI 1083
STRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKI
Sbjct: 1287 STRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKI 1346
Query: 1084 LQRASQKSTVQQLVMTGGHVQGDLLAPEDVFSLLIDDAQLERKLREIPLQA---SRDRQK 1254
LQRASQKSTVQQLVMTGGHVQGDLLAPEDV SLL+DDAQLE+KLR++PLQ S+D+QK
Sbjct: 1347 LQRASQKSTVQQLVMTGGHVQGDLLAPEDVVSLLLDDAQLEQKLRDLPLQVRFKSKDKQK 1406
Query: 1255 KKSGTRGIRINAEGDATLEDLAN------PESQPSQEPEKAMXXXXXXXXXXXXXXXXXX 1416
KK GT+GI ++AEGDATLED N E P E K+
Sbjct: 1407 KKRGTKGILLDAEGDATLEDFPNISQGNGQEPSPDAERPKSSSKKRKAATDKQTPPKPRN 1466
Query: 1417 XXXXXXNTDT----SSPGLMSVDYEADDPQQNLDSQ-HRSKRPKRPTKSVNENLEPAFTA 1581
N D+ + P M++DYE DD QN D Q + KRPKRPTKSVNENLEPAFT
Sbjct: 1467 SQKAMKNVDSYTGMTDPNSMAMDYELDDSLQNDDMQLQKHKRPKRPTKSVNENLEPAFT- 1525
Query: 1582 TPSLVDDRTLNQSSPDLGMVG 1644
+++ ++T Q +LG G
Sbjct: 1526 NSTVIIEQTQYQPHLELGPGG 1546
>emb|CBI29799.3| unnamed protein product [Vitis vinifera]
Length = 1557
Score = 719 bits (1855), Expect = 0.0
Identities = 383/558 (68%), Positives = 436/558 (78%), Gaps = 13/558 (2%)
Frame = +1
Query: 10 NSSNRFFAGNETFGFAHLIDMSAAEISFLATGSFMERLLFTIMRWDRKYLDAMLDLFLEA 189
N+SN + TFGF HL+D+S E++FLATG+FMERLLF IMRWDR++LD +LDL +EA
Sbjct: 987 NNSNGSAVKSGTFGFTHLMDLSPEEVAFLATGTFMERLLFFIMRWDRQFLDGILDLLMEA 1046
Query: 190 ETDGSGCSQIGRDKVRAVTRMLLLPSKADTTFLSR-FATGPWDVPNEALVLSHKDRLLSN 366
E + S + KVRAVTRMLL+PS+++T L R ATG P EALV+ H+DRL +N
Sbjct: 1047 EEEDFSNSHLDSGKVRAVTRMLLMPSRSETNLLRRKLATGLGHAPFEALVVPHQDRLQAN 1106
Query: 367 IRLLHLAYCFIPTTRAPPINAHCSDRNFAYKMVEELDHPWIKRLLLGFARTSNCNGPRKP 546
RL+H Y FIP TRAPPINAHCS+RNFAYK++EEL HPW+KRL +GFARTS+ NGP+KP
Sbjct: 1107 TRLVHATYTFIPRTRAPPINAHCSNRNFAYKLLEELHHPWLKRLFIGFARTSDYNGPKKP 1166
Query: 547 TA-HPLIQEIDSVLPLSQPALQLTYQIFGSCPPMQSFDPAKMLTDSGKLQTLDILLKRLR 723
H LIQEIDS LP+S+PALQLTY+IFGS PPMQSFDPAK+LTDSGKLQTLDILLKRLR
Sbjct: 1167 DVPHHLIQEIDSELPVSKPALQLTYKIFGSSPPMQSFDPAKLLTDSGKLQTLDILLKRLR 1226
Query: 724 AGNHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVKDFQHRSDIFVFLL 903
A NHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMV+DFQ RSDIFVFLL
Sbjct: 1227 AENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQLRSDIFVFLL 1286
Query: 904 STRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKI 1083
STRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKI
Sbjct: 1287 STRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKI 1346
Query: 1084 LQRASQKSTVQQLVMTGGHVQGDLLAPEDVFSLLIDDAQLERKLREIPLQASRDRQKKKS 1263
LQRASQKSTVQQLVMTGGHVQGDLLAPEDV SLL+DDAQLE+KLR++PLQ D+QKKK
Sbjct: 1347 LQRASQKSTVQQLVMTGGHVQGDLLAPEDVVSLLLDDAQLEQKLRDLPLQ---DKQKKKR 1403
Query: 1264 GTRGIRINAEGDATLEDLAN------PESQPSQEPEKAMXXXXXXXXXXXXXXXXXXXXX 1425
GT+GI ++AEGDATLED N E P E K+
Sbjct: 1404 GTKGILLDAEGDATLEDFPNISQGNGQEPSPDAERPKSSSKKRKAATDKQTPPKPRNSQK 1463
Query: 1426 XXXNTDT----SSPGLMSVDYEADDPQQNLDSQ-HRSKRPKRPTKSVNENLEPAFTATPS 1590
N D+ + P M++DYE DD QN D Q + KRPKRPTKSVNENLEPAFT +
Sbjct: 1464 AMKNVDSYTGMTDPNSMAMDYELDDSLQNDDMQLQKHKRPKRPTKSVNENLEPAFT-NST 1522
Query: 1591 LVDDRTLNQSSPDLGMVG 1644
++ ++T Q +LG G
Sbjct: 1523 VIIEQTQYQPHLELGPGG 1540
>ref|XP_002323271.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222867901|gb|EEF05032.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 1540
Score = 707 bits (1824), Expect = 0.0
Identities = 381/536 (71%), Positives = 424/536 (79%), Gaps = 8/536 (1%)
Frame = +1
Query: 10 NSSNRFFAGNETFGFAHLIDMSAAEISFLATGSFMERLLFTIMRWDRKYLDAMLDLFLEA 189
NSS+ + TFGF+HL+D+S AE++FLA SFMERLLF IMRW R++LD +LDL ++
Sbjct: 992 NSSDSLLIKSGTFGFSHLMDLSPAEVAFLAISSFMERLLFFIMRWGRRFLDGILDLLMK- 1050
Query: 190 ETDGSGCSQIGRDKVRAVTRMLLLPSKADTTFLSR-FATGPWDVPNEALVLSHKDRLLSN 366
+ + + + + KVRAVTRMLL+PS+++T L R ATGP D P EALV SH+DRLLSN
Sbjct: 1051 DIENDHSNYLEKHKVRAVTRMLLMPSRSETDILRRKMATGPADTPFEALVNSHQDRLLSN 1110
Query: 367 IRLLHLAYCFIPTTRAPPINAHCSDRNFAYKMVEELDHPWIKRLLLGFARTSNCNGPRKP 546
I+LLH Y FIP TRAPPI CSDRNFAY+M+EEL P +KRLL GFARTS NGPRKP
Sbjct: 1111 IKLLHSTYTFIPRTRAPPIGGQCSDRNFAYQMMEELHQPMVKRLLTGFARTSTFNGPRKP 1170
Query: 547 TA-HPLIQEIDSVLPLSQPALQLTYQIFGSCPPMQSFDPAKMLTDSGKLQTLDILLKRLR 723
HPLIQEIDS LP+SQPALQLTY+IFGSCPPMQSFDPAK+LTDSGKLQTLDILLKRLR
Sbjct: 1171 EPLHPLIQEIDSELPVSQPALQLTYKIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLR 1230
Query: 724 AGNHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVKDFQHRSDIFVFLL 903
A NHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMV+DFQ R+DIFVFLL
Sbjct: 1231 AENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQLRNDIFVFLL 1290
Query: 904 STRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKI 1083
STRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKI
Sbjct: 1291 STRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKI 1350
Query: 1084 LQRASQKSTVQQLVMTGGHVQGDLLAPEDVFSLLIDDAQLERKLREIPLQASRDRQKKKS 1263
LQRASQK+TVQQLVMTGGHVQ DLLAPEDV SLL+DDAQLE+KLREIPLQA RDRQKKK
Sbjct: 1351 LQRASQKNTVQQLVMTGGHVQDDLLAPEDVVSLLLDDAQLEQKLREIPLQA-RDRQKKKP 1409
Query: 1264 GTRGIRINAEGDATLEDLANPESQ-----PSQEPEKAMXXXXXXXXXXXXXXXXXXXXXX 1428
T+ IR++AEGDAT EDL +Q S++ EK
Sbjct: 1410 -TKAIRVDAEGDATFEDLTETVAQGTGNEQSEDAEKLKSPNSNKRKAASDKQITSKPRNS 1468
Query: 1429 XXNTDTSSPGLMSVDYEADDPQQNLDSQ-HRSKRPKRPTKSVNENLEPAFTATPSL 1593
N SSP +DYE DDP N + Q R KR KRP KSVNE LEPAFTATPS+
Sbjct: 1469 QKNEPNSSP----MDYELDDPFPNSEPQSQRPKRLKRPKKSVNEKLEPAFTATPSI 1520
>ref|XP_004161718.1| PREDICTED: LOW QUALITY PROTEIN: DNA helicase INO80-like [Cucumis
sativus]
Length = 711
Score = 695 bits (1794), Expect = 0.0
Identities = 370/535 (69%), Positives = 422/535 (78%), Gaps = 9/535 (1%)
Frame = +1
Query: 7 GNSSNRFFAGNETFGFAHLIDMSAAEISFLATGSFMERLLFTIMRWDRKYLDAMLDLFLE 186
G + + TFGF HL+D+S AE++F A GS +E+LLF+IMRWDR++LD ++D +E
Sbjct: 180 GGKLRHSYCQSGTFGFTHLMDLSPAEVTFXANGSCLEQLLFSIMRWDRQFLDGIVDFIME 239
Query: 187 AETDG-SGCSQIGRDKVRAVTRMLLLPSKADTTFLSR-FATGPWDVPNEALVLSHKDRLL 360
+ D +G ++G KVRAVTRMLL+PS + T L R ATGP D P EALV+ ++RL
Sbjct: 240 SIDDPENGPHELG--KVRAVTRMLLMPSISQTDLLRRRLATGPGDAPFEALVIPQQERLQ 297
Query: 361 SNIRLLHLAYCFIPTTRAPPINAHCSDRNFAYKMVEELDHPWIKRLLLGFARTSNCNGPR 540
SN+ LLH Y FIP TRAPPI HCSDRNF Y+MVE+L PW+KRL +GFARTS+ NGPR
Sbjct: 298 SNVGLLHSVYTFIPRTRAPPIGTHCSDRNFTYQMVEQLHDPWVKRLFIGFARTSDFNGPR 357
Query: 541 KPTA-HPLIQEIDSVLPLSQPALQLTYQIFGSCPPMQSFDPAKMLTDSGKLQTLDILLKR 717
KP HPLIQEIDS LP+ QPALQLTY IFGSCPPMQSFDPAK+LTDSGKLQTLDILLKR
Sbjct: 358 KPKGPHPLIQEIDSELPVFQPALQLTYSIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKR 417
Query: 718 LRAGNHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVKDFQHRSDIFVF 897
LRA NHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMV+DFQHR+DIFVF
Sbjct: 418 LRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQHRNDIFVF 477
Query: 898 LLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEE 1077
LLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEE
Sbjct: 478 LLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEE 537
Query: 1078 KILQRASQKSTVQQLVMTGGHVQGDLLAPEDVFSLLIDDAQLERKLREIPLQASRDRQKK 1257
KILQRASQK+TVQQLVMTGGHVQGD+LAPEDV SLL+DDAQLE+KLREIP+ A +DRQKK
Sbjct: 538 KILQRASQKNTVQQLVMTGGHVQGDILAPEDVVSLLLDDAQLEQKLREIPIVA-KDRQKK 596
Query: 1258 KSGTRGIRINAEGDATLEDLANPESQ-----PSQEPEKAMXXXXXXXXXXXXXXXXXXXX 1422
K +GIR++AEGDA+LEDL NPES+ PS +PEK
Sbjct: 597 KQ-AKGIRVDAEGDASLEDLTNPESRVTEYDPSPDPEKTKANSKKRKGGPEKQNSSKARS 655
Query: 1423 XXXXNTDTSSPGLMSVDYEADDPQQNLDSQ-HRSKRPKRPTKSVNENLEPAFTAT 1584
N SP VD++ D+ +QNL+ Q + KRPKRPTKSVNENL P T+T
Sbjct: 656 LQRIN--EMSP---VVDFDLDESRQNLEPQTQKPKRPKRPTKSVNENLVPTTTST 705
>ref|XP_004142662.1| PREDICTED: DNA helicase INO80-like [Cucumis sativus]
Length = 1501
Score = 693 bits (1788), Expect = 0.0
Identities = 370/535 (69%), Positives = 422/535 (78%), Gaps = 9/535 (1%)
Frame = +1
Query: 7 GNSSNRFFAGNETFGFAHLIDMSAAEISFLATGSFMERLLFTIMRWDRKYLDAMLDLFLE 186
G + + TFGF HL+D+S AE++FLA GS +E+LLF+IMRWDR++LD ++D +E
Sbjct: 970 GGKLRHSYCQSGTFGFTHLMDLSPAEVTFLANGSCLEQLLFSIMRWDRQFLDGIVDFIME 1029
Query: 187 AETDG-SGCSQIGRDKVRAVTRMLLLPSKADTTFLSR-FATGPWDVPNEALVLSHKDRLL 360
+ D +G ++G KVRAVTRMLL+PS + T L R ATGP D P EALV+ ++RL
Sbjct: 1030 SIDDPENGPHELG--KVRAVTRMLLMPSISQTDLLRRRLATGPGDAPFEALVIPQQERLQ 1087
Query: 361 SNIRLLHLAYCFIPTTRAPPINAHCSDRNFAYKMVEELDHPWIKRLLLGFARTSNCNGPR 540
SN+ LLH Y FIP TRAPPI HCSDRNF Y+MVE+L PW+KRL +GFARTS+ NGPR
Sbjct: 1088 SNVGLLHSVYTFIPRTRAPPIGTHCSDRNFTYQMVEQLHDPWVKRLFIGFARTSDFNGPR 1147
Query: 541 KPTA-HPLIQEIDSVLPLSQPALQLTYQIFGSCPPMQSFDPAKMLTDSGKLQTLDILLKR 717
KP HPLIQEIDS LP+ QPALQLTY IFGSCPPMQSFDPAK+LTDSGKLQTLDILLKR
Sbjct: 1148 KPKGPHPLIQEIDSELPVFQPALQLTYSIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKR 1207
Query: 718 LRAGNHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVKDFQHRSDIFVF 897
LRA NHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMV+DFQ R+DIFVF
Sbjct: 1208 LRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVRDFQLRNDIFVF 1267
Query: 898 LLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEE 1077
LLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEE
Sbjct: 1268 LLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEE 1327
Query: 1078 KILQRASQKSTVQQLVMTGGHVQGDLLAPEDVFSLLIDDAQLERKLREIPLQASRDRQKK 1257
KILQRASQK+TVQQLVMTGGHVQGD+LAPEDV SLL+DDAQLE+KLREIP+ A +DRQKK
Sbjct: 1328 KILQRASQKNTVQQLVMTGGHVQGDILAPEDVVSLLLDDAQLEQKLREIPIVA-KDRQKK 1386
Query: 1258 KSGTRGIRINAEGDATLEDLANPESQ-----PSQEPEKAMXXXXXXXXXXXXXXXXXXXX 1422
K +GIR++AEGDA+LEDL NPES+ PS +PEK
Sbjct: 1387 KQ-AKGIRVDAEGDASLEDLTNPESRVTEYDPSPDPEKTKANSKKRKGGPEKQNSSKARS 1445
Query: 1423 XXXXNTDTSSPGLMSVDYEADDPQQNLDSQ-HRSKRPKRPTKSVNENLEPAFTAT 1584
N SP VD++ D+ +QNL+ Q + KRPKRPTKSVNENL P T+T
Sbjct: 1446 LQRIN--EMSP---VVDFDLDESRQNLEPQTQKPKRPKRPTKSVNENLVPTTTST 1495