BLASTX nr result

ID: Bupleurum21_contig00014333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014333
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285620.1| PREDICTED: GDT1-like protein 2, chloroplasti...   123   2e-26
ref|XP_003535962.1| PREDICTED: GDT1-like protein 2, chloroplasti...   122   2e-26
ref|XP_002518164.1| Transmembrane protein TPARL, putative [Ricin...   120   9e-26
ref|XP_004134019.1| PREDICTED: LOW QUALITY PROTEIN: GDT1-like pr...   120   1e-25
ref|XP_002297830.1| predicted membrane protein [Populus trichoca...   117   1e-24

>ref|XP_002285620.1| PREDICTED: GDT1-like protein 2, chloroplastic [Vitis vinifera]
           gi|297741903|emb|CBI33338.3| unnamed protein product
           [Vitis vinifera]
          Length = 354

 Score =  123 bits (308), Expect = 2e-26
 Identities = 63/69 (91%), Positives = 64/69 (92%)
 Frame = +3

Query: 3   RSMLATIALGAAQSPWGVASGAIAGHLLATMIAIVGGAILARYISEKLVGYLGGALFLVF 182
           RSMLATIALGAAQSPWGVASGAIAGHL AT IAI+GGA LA YISEKLVGYLGGALFLVF
Sbjct: 286 RSMLATIALGAAQSPWGVASGAIAGHLFATTIAILGGAFLANYISEKLVGYLGGALFLVF 345

Query: 183 AVATFLGVF 209
           AVATF GVF
Sbjct: 346 AVATFFGVF 354


>ref|XP_003535962.1| PREDICTED: GDT1-like protein 2, chloroplastic-like [Glycine max]
          Length = 354

 Score =  122 bits (307), Expect = 2e-26
 Identities = 62/69 (89%), Positives = 64/69 (92%)
 Frame = +3

Query: 3   RSMLATIALGAAQSPWGVASGAIAGHLLATMIAIVGGAILARYISEKLVGYLGGALFLVF 182
           RSMLATIALGAAQSPWGVASGAIAGHLLAT IAI+GGA LA YISEKLVGYLGG LFL+F
Sbjct: 286 RSMLATIALGAAQSPWGVASGAIAGHLLATTIAILGGAFLANYISEKLVGYLGGGLFLIF 345

Query: 183 AVATFLGVF 209
           AVATF GVF
Sbjct: 346 AVATFFGVF 354


>ref|XP_002518164.1| Transmembrane protein TPARL, putative [Ricinus communis]
           gi|223542760|gb|EEF44297.1| Transmembrane protein TPARL,
           putative [Ricinus communis]
          Length = 351

 Score =  120 bits (302), Expect = 9e-26
 Identities = 60/69 (86%), Positives = 64/69 (92%)
 Frame = +3

Query: 3   RSMLATIALGAAQSPWGVASGAIAGHLLATMIAIVGGAILARYISEKLVGYLGGALFLVF 182
           RSMLATIALGAAQSPWGVA+GAIAGHL+AT IAI+GGA LA YISEKLVGYLGG LFLVF
Sbjct: 283 RSMLATIALGAAQSPWGVATGAIAGHLIATSIAILGGAFLANYISEKLVGYLGGVLFLVF 342

Query: 183 AVATFLGVF 209
           A+ATF GVF
Sbjct: 343 AIATFFGVF 351


>ref|XP_004134019.1| PREDICTED: LOW QUALITY PROTEIN: GDT1-like protein 2,
           chloroplastic-like [Cucumis sativus]
          Length = 355

 Score =  120 bits (301), Expect = 1e-25
 Identities = 58/69 (84%), Positives = 65/69 (94%)
 Frame = +3

Query: 3   RSMLATIALGAAQSPWGVASGAIAGHLLATMIAIVGGAILARYISEKLVGYLGGALFLVF 182
           RSMLATIALGAAQSPWGVA+GAI GHL+AT IAI+GGA+LA+YISEKLVGYLGG LFL+F
Sbjct: 287 RSMLATIALGAAQSPWGVATGAITGHLIATTIAILGGALLAKYISEKLVGYLGGVLFLIF 346

Query: 183 AVATFLGVF 209
           A+ATF GVF
Sbjct: 347 AIATFFGVF 355


>ref|XP_002297830.1| predicted membrane protein [Populus trichocarpa]
           gi|222845088|gb|EEE82635.1| predicted membrane protein
           [Populus trichocarpa]
          Length = 315

 Score =  117 bits (293), Expect = 1e-24
 Identities = 59/69 (85%), Positives = 62/69 (89%)
 Frame = +3

Query: 3   RSMLATIALGAAQSPWGVASGAIAGHLLATMIAIVGGAILARYISEKLVGYLGGALFLVF 182
           RSMLATIALGAAQSPWGVA+GAIAGHL+AT  AI+GGA LA YISEKLVGYLGG LFLVF
Sbjct: 247 RSMLATIALGAAQSPWGVATGAIAGHLVATSFAILGGAFLANYISEKLVGYLGGVLFLVF 306

Query: 183 AVATFLGVF 209
           AVATF G F
Sbjct: 307 AVATFFGFF 315


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