BLASTX nr result

ID: Bupleurum21_contig00014312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014312
         (1292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96037.1| unknown [Populus trichocarpa]                          497   e-138
ref|XP_002327369.1| predicted protein [Populus trichocarpa] gi|2...   496   e-138
ref|XP_002282092.1| PREDICTED: d-3-phosphoglycerate dehydrogenas...   488   e-135
emb|CBI39250.3| unnamed protein product [Vitis vinifera]              487   e-135
ref|XP_003634565.1| PREDICTED: d-3-phosphoglycerate dehydrogenas...   484   e-134

>gb|ABK96037.1| unknown [Populus trichocarpa]
          Length = 343

 Score =  497 bits (1279), Expect = e-138
 Identities = 251/336 (74%), Positives = 287/336 (85%), Gaps = 4/336 (1%)
 Frame = +2

Query: 38   ITRVLFCGPHFIAADNYTREYLQKQPLVQVENVPSDGVADVIGNYDMCVVKSMQLTSSII 217
            ITRVLFCGP+F A+  YT+EYLQK P +QV++VP   V DVI NY++C+VK+M+LTS+II
Sbjct: 9    ITRVLFCGPYFPASHQYTKEYLQKYPFIQVDDVPLAVVPDVISNYNICIVKNMRLTSNII 68

Query: 218  SRATKMKLIMQYGVGLEGVDIHAATRLGIKVARIPSAKTGNAASCAEMAIYLMLGLLRKQ 397
            SRAT+MKLIMQ+GVG+EGVDI AAT+ GIKVARIP   TGNAASCAEMAIYLMLGLLRKQ
Sbjct: 69   SRATQMKLIMQFGVGIEGVDIDAATKYGIKVARIPGDATGNAASCAEMAIYLMLGLLRKQ 128

Query: 398  KEMESSVKKKMVGEPVGGTLLGKTVFIMGFGNIGIQLAKRLHPFGVKILATKRSWV---- 565
             EM+ S+K+K +GEP G TL GKTVFIMGFGNIGI LAKRL PFGVKI+ATKRSW     
Sbjct: 129  NEMQISIKQKRLGEPAGETLFGKTVFIMGFGNIGIDLAKRLRPFGVKIIATKRSWALHSE 188

Query: 566  SSLQSNGGLHNGHGTYDDLVDEKGGQEDFQKFAQAADIVVCCLAMNSDTAGIVNKSFISS 745
             SLQSNG L   +GT D+LVDEKG  ED  KFA  +DIVVCCL MN +TAGIVNKSFISS
Sbjct: 189  GSLQSNGFLIE-NGTNDNLVDEKGSHEDIYKFAGESDIVVCCLRMNKETAGIVNKSFISS 247

Query: 746  MKKGALLVNIARGGILDYEAVLYHLKSGHLGGLGIDVAWTEPFDSDDPVLQFPNVILTPH 925
            MKKG+LLVNIARGG+LDY AV++HL+SGHLGGLGIDVAWTEPFD DDP+L+F NVI++PH
Sbjct: 248  MKKGSLLVNIARGGLLDYNAVVHHLESGHLGGLGIDVAWTEPFDPDDPILKFNNVIISPH 307

Query: 926  VAGVTEFSYRSMAKVVGDVAIQLHEGAPLTGIEFVN 1033
            VAGVTE SYRSM+KVVGDVA+QLH G PLTGIE VN
Sbjct: 308  VAGVTEHSYRSMSKVVGDVALQLHSGNPLTGIEIVN 343


>ref|XP_002327369.1| predicted protein [Populus trichocarpa] gi|222835739|gb|EEE74174.1|
            predicted protein [Populus trichocarpa]
          Length = 343

 Score =  496 bits (1277), Expect = e-138
 Identities = 250/336 (74%), Positives = 288/336 (85%), Gaps = 4/336 (1%)
 Frame = +2

Query: 38   ITRVLFCGPHFIAADNYTREYLQKQPLVQVENVPSDGVADVIGNYDMCVVKSMQLTSSII 217
            ITRVLFCGP+F A+  YT+EYLQK P +QV++VP   V DVI NY++C+VK+M+LTS+II
Sbjct: 9    ITRVLFCGPYFPASHQYTKEYLQKYPFIQVDDVPLAVVPDVISNYNICIVKNMRLTSNII 68

Query: 218  SRATKMKLIMQYGVGLEGVDIHAATRLGIKVARIPSAKTGNAASCAEMAIYLMLGLLRKQ 397
            SRAT+MKLIMQ+GVG+EGVDI AAT+ GIKVARIP   TGNAASCAEMAIYLMLGLLRKQ
Sbjct: 69   SRATQMKLIMQFGVGIEGVDIDAATKYGIKVARIPGDATGNAASCAEMAIYLMLGLLRKQ 128

Query: 398  KEMESSVKKKMVGEPVGGTLLGKTVFIMGFGNIGIQLAKRLHPFGVKILATKRSWV---- 565
             EM+ S+K+K +GEP G TL GKTVFIMGFGNIGI LAKRL PFGVKI+ATKRSW     
Sbjct: 129  NEMQISIKQKRLGEPAGETLFGKTVFIMGFGNIGIDLAKRLRPFGVKIIATKRSWALHSE 188

Query: 566  SSLQSNGGLHNGHGTYDDLVDEKGGQEDFQKFAQAADIVVCCLAMNSDTAGIVNKSFISS 745
             SLQSNG L   +GT D+LVDEKG  ED  KFA  +DIVVCCL MN +TAGIVNKSFISS
Sbjct: 189  GSLQSNGFLIE-NGTNDNLVDEKGSHEDIYKFAGESDIVVCCLRMNKETAGIVNKSFISS 247

Query: 746  MKKGALLVNIARGGILDYEAVLYHLKSGHLGGLGIDVAWTEPFDSDDPVLQFPNVILTPH 925
            MKKG+LLVNIARGG+L+Y+AV++HL+SGHLGGLGIDVAWTEPFD DDP+L+F NVI++PH
Sbjct: 248  MKKGSLLVNIARGGLLEYDAVVHHLESGHLGGLGIDVAWTEPFDPDDPILKFNNVIISPH 307

Query: 926  VAGVTEFSYRSMAKVVGDVAIQLHEGAPLTGIEFVN 1033
            VAGVTE SYRSM+KVVGDVA+QLH G PLTGIE VN
Sbjct: 308  VAGVTEHSYRSMSKVVGDVALQLHSGNPLTGIEIVN 343


>ref|XP_002282092.1| PREDICTED: d-3-phosphoglycerate dehydrogenase-like isoform 1 [Vitis
            vinifera]
          Length = 373

 Score =  488 bits (1257), Expect = e-135
 Identities = 245/346 (70%), Positives = 286/346 (82%), Gaps = 4/346 (1%)
 Frame = +2

Query: 8    EMATKTENSSITRVLFCGPHFIAADNYTREYLQKQPLVQVENVPSDGVADVIGNYDMCVV 187
            E   K  N  ITR+LFCGP+F A++ YTREYLQ  P +QV++   + V DVI +YDMC+V
Sbjct: 29   EKMVKDSNGCITRLLFCGPNFPASNKYTREYLQNYPFIQVDDSSFEDVPDVIADYDMCIV 88

Query: 188  KSMQLTSSIISRATKMKLIMQYGVGLEGVDIHAATRLGIKVARIPSAKTGNAASCAEMAI 367
            KSM+L S+IISRA KMKLIMQ+GVGLEGVDI+AAT+ GIKVARI S +TGNAASCAEMAI
Sbjct: 89   KSMRLDSNIISRANKMKLIMQFGVGLEGVDINAATKCGIKVARIASGETGNAASCAEMAI 148

Query: 368  YLMLGLLRKQKEMESSVKKKMVGEPVGGTLLGKTVFIMGFGNIGIQLAKRLHPFGVKILA 547
            YLMLGLLRKQKEM+ S+K+K+VGEP+G TL GKTVFIMGFGNIGI LAKRL PFGV+ILA
Sbjct: 149  YLMLGLLRKQKEMQISLKQKIVGEPIGDTLFGKTVFIMGFGNIGIDLAKRLRPFGVRILA 208

Query: 548  TKRSWVS----SLQSNGGLHNGHGTYDDLVDEKGGQEDFQKFAQAADIVVCCLAMNSDTA 715
            TKRSW S    S QSN G    +   D+LVDEKGG E    FA +ADIVVCCL +NS+TA
Sbjct: 209  TKRSWASQSLNSSQSN-GFPTPNDNADELVDEKGGHEAIYDFASSADIVVCCLRLNSETA 267

Query: 716  GIVNKSFISSMKKGALLVNIARGGILDYEAVLYHLKSGHLGGLGIDVAWTEPFDSDDPVL 895
             I++K FISSM+KG LL+NIARGG++DYEAV YHL+SGHLGGLG DV WTEPF+ DD +L
Sbjct: 268  AIIDKKFISSMRKGGLLINIARGGLMDYEAVAYHLESGHLGGLGTDVTWTEPFNPDDQIL 327

Query: 896  QFPNVILTPHVAGVTEFSYRSMAKVVGDVAIQLHEGAPLTGIEFVN 1033
            +F NVI+TPHVAGVTE SYRSMAKVVGD+A+QLH GAPLTG+EFVN
Sbjct: 328  KFQNVIVTPHVAGVTEHSYRSMAKVVGDIALQLHAGAPLTGLEFVN 373


>emb|CBI39250.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  487 bits (1254), Expect = e-135
 Identities = 244/342 (71%), Positives = 285/342 (83%), Gaps = 4/342 (1%)
 Frame = +2

Query: 20   KTENSSITRVLFCGPHFIAADNYTREYLQKQPLVQVENVPSDGVADVIGNYDMCVVKSMQ 199
            K  N  ITR+LFCGP+F A++ YTREYLQ  P +QV++   + V DVI +YDMC+VKSM+
Sbjct: 3    KDSNGCITRLLFCGPNFPASNKYTREYLQNYPFIQVDDSSFEDVPDVIADYDMCIVKSMR 62

Query: 200  LTSSIISRATKMKLIMQYGVGLEGVDIHAATRLGIKVARIPSAKTGNAASCAEMAIYLML 379
            L S+IISRA KMKLIMQ+GVGLEGVDI+AAT+ GIKVARI S +TGNAASCAEMAIYLML
Sbjct: 63   LDSNIISRANKMKLIMQFGVGLEGVDINAATKCGIKVARIASGETGNAASCAEMAIYLML 122

Query: 380  GLLRKQKEMESSVKKKMVGEPVGGTLLGKTVFIMGFGNIGIQLAKRLHPFGVKILATKRS 559
            GLLRKQKEM+ S+K+K+VGEP+G TL GKTVFIMGFGNIGI LAKRL PFGV+ILATKRS
Sbjct: 123  GLLRKQKEMQISLKQKIVGEPIGDTLFGKTVFIMGFGNIGIDLAKRLRPFGVRILATKRS 182

Query: 560  WVS----SLQSNGGLHNGHGTYDDLVDEKGGQEDFQKFAQAADIVVCCLAMNSDTAGIVN 727
            W S    S QSN G    +   D+LVDEKGG E    FA +ADIVVCCL +NS+TA I++
Sbjct: 183  WASQSLNSSQSN-GFPTPNDNADELVDEKGGHEAIYDFASSADIVVCCLRLNSETAAIID 241

Query: 728  KSFISSMKKGALLVNIARGGILDYEAVLYHLKSGHLGGLGIDVAWTEPFDSDDPVLQFPN 907
            K FISSM+KG LL+NIARGG++DYEAV YHL+SGHLGGLG DV WTEPF+ DD +L+F N
Sbjct: 242  KKFISSMRKGGLLINIARGGLMDYEAVAYHLESGHLGGLGTDVTWTEPFNPDDQILKFQN 301

Query: 908  VILTPHVAGVTEFSYRSMAKVVGDVAIQLHEGAPLTGIEFVN 1033
            VI+TPHVAGVTE SYRSMAKVVGD+A+QLH GAPLTG+EFVN
Sbjct: 302  VIVTPHVAGVTEHSYRSMAKVVGDIALQLHAGAPLTGLEFVN 343


>ref|XP_003634565.1| PREDICTED: d-3-phosphoglycerate dehydrogenase-like isoform 2 [Vitis
            vinifera]
          Length = 333

 Score =  484 bits (1245), Expect = e-134
 Identities = 240/338 (71%), Positives = 280/338 (82%)
 Frame = +2

Query: 20   KTENSSITRVLFCGPHFIAADNYTREYLQKQPLVQVENVPSDGVADVIGNYDMCVVKSMQ 199
            K  N  ITR+LFCGP+F A++ YTREYLQ  P +QV++   + V DVI +YDMC+VKSM+
Sbjct: 3    KDSNGCITRLLFCGPNFPASNKYTREYLQNYPFIQVDDSSFEDVPDVIADYDMCIVKSMR 62

Query: 200  LTSSIISRATKMKLIMQYGVGLEGVDIHAATRLGIKVARIPSAKTGNAASCAEMAIYLML 379
            L S+IISRA KMKLIMQ+GVGLEGVDI+AAT+ GIKVARI S +TGNAASCAEMAIYLML
Sbjct: 63   LDSNIISRANKMKLIMQFGVGLEGVDINAATKCGIKVARIASGETGNAASCAEMAIYLML 122

Query: 380  GLLRKQKEMESSVKKKMVGEPVGGTLLGKTVFIMGFGNIGIQLAKRLHPFGVKILATKRS 559
            GLLRKQKEM+ S+K+K+VGEP+G TL GKTVFIMGFGNIGI LAKRL PFGV+ILATKRS
Sbjct: 123  GLLRKQKEMQISLKQKIVGEPIGDTLFGKTVFIMGFGNIGIDLAKRLRPFGVRILATKRS 182

Query: 560  WVSSLQSNGGLHNGHGTYDDLVDEKGGQEDFQKFAQAADIVVCCLAMNSDTAGIVNKSFI 739
            W S    N          D+LVDEKGG E    FA +ADIVVCCL +NS+TA I++K FI
Sbjct: 183  WASQSLPNDNA-------DELVDEKGGHEAIYDFASSADIVVCCLRLNSETAAIIDKKFI 235

Query: 740  SSMKKGALLVNIARGGILDYEAVLYHLKSGHLGGLGIDVAWTEPFDSDDPVLQFPNVILT 919
            SSM+KG LL+NIARGG++DYEAV YHL+SGHLGGLG DV WTEPF+ DD +L+F NVI+T
Sbjct: 236  SSMRKGGLLINIARGGLMDYEAVAYHLESGHLGGLGTDVTWTEPFNPDDQILKFQNVIVT 295

Query: 920  PHVAGVTEFSYRSMAKVVGDVAIQLHEGAPLTGIEFVN 1033
            PHVAGVTE SYRSMAKVVGD+A+QLH GAPLTG+EFVN
Sbjct: 296  PHVAGVTEHSYRSMAKVVGDIALQLHAGAPLTGLEFVN 333


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