BLASTX nr result

ID: Bupleurum21_contig00014302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014302
         (807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AET99101.1| dehydration-responsive element-binding protein DR...   134   7e-34
ref|XP_002285802.1| PREDICTED: ethylene-responsive transcription...   147   4e-33
emb|CBI19140.3| unnamed protein product [Vitis vinifera]              144   2e-32
ref|NP_001234707.1| dehydration-responsive element binding prote...   134   2e-32
ref|XP_002513895.1| DNA binding protein, putative [Ricinus commu...   143   5e-32

>gb|AET99101.1| dehydration-responsive element-binding protein DREB4 [Solanum
           tuberosum]
          Length = 366

 Score =  134 bits (337), Expect(2) = 7e-34
 Identities = 67/111 (60%), Positives = 74/111 (66%), Gaps = 7/111 (6%)
 Frame = +2

Query: 227 LNFLTPNPIPMKQVXXXXXXXXPPKPEKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFD 406
           +NFL P P+PMKQ         PPKP KLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFD
Sbjct: 164 MNFLAPKPVPMKQ------SGSPPKPSKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFD 217

Query: 407 TXXXXXXXXXXXXXKLRGDSARLNFAHM-------GGNFGDYKPLHSAVEA 538
           T              LRGD ARLNF  +       GG+FG+Y PLHS+V+A
Sbjct: 218 TAEEAALAYDKAAYMLRGDFARLNFPQLRHNGNLIGGDFGEYNPLHSSVDA 268



 Score = 36.2 bits (82), Expect(2) = 7e-34
 Identities = 20/49 (40%), Positives = 30/49 (61%)
 Frame = +3

Query: 660 TLAEGKSVDAKKKKKQXXXXXXXXXXXXQMQIEEGVKVEASSDTNGSGS 806
           +LA+GKS+D+KKKK +            +M+ EE   VE  S+++GSGS
Sbjct: 276 SLAQGKSIDSKKKKTK--GSSAEKAAVVKMEEEESKTVEVGSESDGSGS 322


>ref|XP_002285802.1| PREDICTED: ethylene-responsive transcription factor RAP2-4-like
           isoform 1 [Vitis vinifera]
          Length = 367

 Score =  147 bits (370), Expect = 4e-33
 Identities = 90/193 (46%), Positives = 99/193 (51%), Gaps = 22/193 (11%)
 Frame = +2

Query: 26  CTTSTTHLYSPGYSGPGHISIHDAFDPRQPGPIGXXXXXXXXXXXXXXXXXXXXXXXXXX 205
           C+TSTTH+ S G+S       HD       GPIG                          
Sbjct: 71  CSTSTTHVISQGFSS------HDLQGFEHSGPIGLNHLTPSQIHQIQAQIQLQQHHNHMP 124

Query: 206 XXXX--------------RKQL-NFLTPNPIPMKQVXXXXXXXXPPKPEKLYRGVRQRHW 340
                             R+Q  NFL+P PIPMKQV        PPKP KLYRGVRQRHW
Sbjct: 125 AVAAAASFNTQNLPQWQQRQQAPNFLSPKPIPMKQVGV------PPKPTKLYRGVRQRHW 178

Query: 341 GKWVAEIRLPKNRTRLWLGTFDTXXXXXXXXXXXXXKLRGDSARLNF-------AHMGGN 499
           GKWVAEIRLPKNRTRLWLGTFDT             KLRGD ARLNF       +H+GG 
Sbjct: 179 GKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHQGSHIGGE 238

Query: 500 FGDYKPLHSAVEA 538
           FGDYKPLHS+V+A
Sbjct: 239 FGDYKPLHSSVDA 251


>emb|CBI19140.3| unnamed protein product [Vitis vinifera]
          Length = 281

 Score =  144 bits (363), Expect = 2e-32
 Identities = 86/178 (48%), Positives = 95/178 (53%), Gaps = 7/178 (3%)
 Frame = +2

Query: 26  CTTSTTHLYSPGYSGPGHISIHDAFDPRQPGPIGXXXXXXXXXXXXXXXXXXXXXXXXXX 205
           C+TSTTH+ S G+S       HD       GPIG                          
Sbjct: 42  CSTSTTHVISQGFSS------HDLQGFEHSGPIGLNHLTPSQIHQIQAQIQL-------- 87

Query: 206 XXXXRKQLNFLTPNPIPMKQVXXXXXXXXPPKPEKLYRGVRQRHWGKWVAEIRLPKNRTR 385
                +Q +   P PIPMKQV        PPKP KLYRGVRQRHWGKWVAEIRLPKNRTR
Sbjct: 88  -----QQHHNHMPAPIPMKQVGV------PPKPTKLYRGVRQRHWGKWVAEIRLPKNRTR 136

Query: 386 LWLGTFDTXXXXXXXXXXXXXKLRGDSARLNF-------AHMGGNFGDYKPLHSAVEA 538
           LWLGTFDT             KLRGD ARLNF       +H+GG FGDYKPLHS+V+A
Sbjct: 137 LWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHQGSHIGGEFGDYKPLHSSVDA 194


>ref|NP_001234707.1| dehydration-responsive element binding protein 3 [Solanum
           lycopersicum] gi|27436378|gb|AAO13360.1|
           dehydration-responsive element binding protein 3
           [Solanum lycopersicum]
          Length = 264

 Score =  134 bits (336), Expect(2) = 2e-32
 Identities = 67/111 (60%), Positives = 74/111 (66%), Gaps = 7/111 (6%)
 Frame = +2

Query: 227 LNFLTPNPIPMKQVXXXXXXXXPPKPEKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFD 406
           +NFL P P+PMKQ         PPKP KLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFD
Sbjct: 62  MNFLAPKPVPMKQ------SGSPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFD 115

Query: 407 TXXXXXXXXXXXXXKLRGDSARLNFAHM-------GGNFGDYKPLHSAVEA 538
           T              LRGD ARLNF  +       GG+FG+Y PLHS+V+A
Sbjct: 116 TAEEAALAYDKAAYMLRGDFARLNFPQLRHNGNLIGGDFGEYNPLHSSVDA 166



 Score = 31.6 bits (70), Expect(2) = 2e-32
 Identities = 18/49 (36%), Positives = 28/49 (57%)
 Frame = +3

Query: 660 TLAEGKSVDAKKKKKQXXXXXXXXXXXXQMQIEEGVKVEASSDTNGSGS 806
           +LA+GKS+D+KKKK +            +M+ EE    E  S+++GS S
Sbjct: 174 SLAQGKSIDSKKKKTK--GLSAEKAAVVKMEEEESKTAEVGSESDGSHS 220


>ref|XP_002513895.1| DNA binding protein, putative [Ricinus communis]
           gi|223546981|gb|EEF48478.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 383

 Score =  143 bits (360), Expect = 5e-32
 Identities = 73/114 (64%), Positives = 79/114 (69%), Gaps = 7/114 (6%)
 Frame = +2

Query: 218 RKQLNFLTPNPIPMKQVXXXXXXXXPPKPEKLYRGVRQRHWGKWVAEIRLPKNRTRLWLG 397
           +  LNFL+P PIPMKQV        PPKP KLYRGVRQRHWGKWVAEIRLPKNRTRLWLG
Sbjct: 157 QNSLNFLSPKPIPMKQVGS------PPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLG 210

Query: 398 TFDTXXXXXXXXXXXXXKLRGDSARLNF-------AHMGGNFGDYKPLHSAVEA 538
           TFDT             KLRGD ARLNF       +H+ G FG+YKPLHSAV+A
Sbjct: 211 TFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHQGSHIEGKFGEYKPLHSAVDA 264


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