BLASTX nr result

ID: Bupleurum21_contig00014300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014300
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282621.1| PREDICTED: pre-mRNA-splicing factor ISY1 hom...   163   4e-38
ref|XP_004135885.1| PREDICTED: pre-mRNA-splicing factor ISY1 hom...   157   2e-36
emb|CBI37603.3| unnamed protein product [Vitis vinifera]              149   8e-34
ref|XP_002520620.1| Pre-mRNA-splicing factor isy-1, putative [Ri...   144   2e-32
ref|XP_003544437.1| PREDICTED: pre-mRNA-splicing factor ISY1 hom...   143   3e-32

>ref|XP_002282621.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog isoform 1 [Vitis
           vinifera] gi|359476953|ref|XP_003631919.1| PREDICTED:
           pre-mRNA-splicing factor ISY1 homolog isoform 2 [Vitis
           vinifera] gi|359476955|ref|XP_003631920.1| PREDICTED:
           pre-mRNA-splicing factor ISY1 homolog isoform 3 [Vitis
           vinifera] gi|147773415|emb|CAN60270.1| hypothetical
           protein VITISV_029395 [Vitis vinifera]
          Length = 298

 Score =  163 bits (412), Expect = 4e-38
 Identities = 90/151 (59%), Positives = 103/151 (68%), Gaps = 1/151 (0%)
 Frame = -1

Query: 730 ELRKRRTRYDIYKRIDASYYGYRDEEDGILEKLEGPAEERMREEKVREWNEMEAIKREAK 551
           ELRKR++RYDIYKRIDASYYGYRD+EDG+LEK+EGPAEERMR  K+ EW  +E IKREA+
Sbjct: 148 ELRKRKSRYDIYKRIDASYYGYRDDEDGVLEKVEGPAEERMRAAKLAEWEALEEIKREAR 207

Query: 550 RSVKSAEVGVVAKF-LXXXXXXXXXXXXXXXXXXXXXXXXXEFMVHVPLPDEKEIERMXX 374
           R+VKS EV  VA   +                         EF+VHVPLPDEKEIERM  
Sbjct: 208 RAVKSGEVASVAPAGILFEEEEDVVEEERQAAREKENEKEREFVVHVPLPDEKEIERMVV 267

Query: 373 XXXXXXXLSKYTSKDLLEEQSEAKAMLNIHR 281
                  LSKYTS+ LLEEQ+EAKAMLNI R
Sbjct: 268 EKKKMELLSKYTSEGLLEEQTEAKAMLNIQR 298


>ref|XP_004135885.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Cucumis sativus]
           gi|449491085|ref|XP_004158794.1| PREDICTED:
           pre-mRNA-splicing factor ISY1 homolog isoform 1 [Cucumis
           sativus] gi|449491087|ref|XP_004158795.1| PREDICTED:
           pre-mRNA-splicing factor ISY1 homolog isoform 2 [Cucumis
           sativus]
          Length = 303

 Score =  157 bits (398), Expect = 2e-36
 Identities = 88/156 (56%), Positives = 99/156 (63%), Gaps = 6/156 (3%)
 Frame = -1

Query: 730 ELRKRRTRYDIYKRIDASYYGYRDEEDGILEKLEGPAEERMREEKVREWNEMEAIKREAK 551
           ELRKRRTRYDIYKRIDASYYGYRD+EDG+LE++EGP+EERMR E V EW  ME I++EAK
Sbjct: 148 ELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRMEEIRKEAK 207

Query: 550 RSVKSAEVGVVAK------FLXXXXXXXXXXXXXXXXXXXXXXXXXEFMVHVPLPDEKEI 389
           R+VKS EV  V                                   EF+VHVPLPDEKEI
Sbjct: 208 RAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEI 267

Query: 388 ERMXXXXXXXXXLSKYTSKDLLEEQSEAKAMLNIHR 281
           E+M         LSKY S  LLEEQSEAK+MLNI R
Sbjct: 268 EKMVLEKKKMELLSKYASDMLLEEQSEAKSMLNIQR 303


>emb|CBI37603.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score =  149 bits (375), Expect = 8e-34
 Identities = 84/150 (56%), Positives = 96/150 (64%)
 Frame = -1

Query: 730 ELRKRRTRYDIYKRIDASYYGYRDEEDGILEKLEGPAEERMREEKVREWNEMEAIKREAK 551
           ELRKR++RYDIYKRIDASYYGYRD+EDG+LEK+EGPAEERMR  K+ EW  +E IKREA+
Sbjct: 148 ELRKRKSRYDIYKRIDASYYGYRDDEDGVLEKVEGPAEERMRAAKLAEWEALEEIKREAR 207

Query: 550 RSVKSAEVGVVAKFLXXXXXXXXXXXXXXXXXXXXXXXXXEFMVHVPLPDEKEIERMXXX 371
           R+ K  E                                  F+VHVPLPDEKEIERM   
Sbjct: 208 RA-KERE----------------------------------FVVHVPLPDEKEIERMVVE 232

Query: 370 XXXXXXLSKYTSKDLLEEQSEAKAMLNIHR 281
                 LSKYTS+ LLEEQ+EAKAMLNI R
Sbjct: 233 KKKMELLSKYTSEGLLEEQTEAKAMLNIQR 262


>ref|XP_002520620.1| Pre-mRNA-splicing factor isy-1, putative [Ricinus communis]
           gi|223540181|gb|EEF41756.1| Pre-mRNA-splicing factor
           isy-1, putative [Ricinus communis]
          Length = 302

 Score =  144 bits (362), Expect = 2e-32
 Identities = 83/153 (54%), Positives = 95/153 (62%), Gaps = 5/153 (3%)
 Frame = -1

Query: 730 ELRKRRTRYDIYKRIDASYYGYRDEEDGILEKLEGPAEERMREEKVREWNEMEAIKREAK 551
           ELRKRRTRYDIYKRIDASYYGYRD+EDG+LEK+E PAEE+MR   V EW  M+ I++EA+
Sbjct: 148 ELRKRRTRYDIYKRIDASYYGYRDDEDGVLEKVEVPAEEKMRAAAVEEWRRMDEIRKEAR 207

Query: 550 RSVKS-AEVGVVAKFL----XXXXXXXXXXXXXXXXXXXXXXXXXEFMVHVPLPDEKEIE 386
           +  K    VG  A  +                             EF+VHVPLPDEKEIE
Sbjct: 208 KGAKEVVTVGAAAAEVLVEEEEDVVEEERQIEREREEKERMEKMNEFVVHVPLPDEKEIE 267

Query: 385 RMXXXXXXXXXLSKYTSKDLLEEQSEAKAMLNI 287
           RM         LSKY S+ LLEEQSEAKAMLNI
Sbjct: 268 RMVLEKKKMDLLSKYASEGLLEEQSEAKAMLNI 300


>ref|XP_003544437.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Glycine max]
          Length = 299

 Score =  143 bits (361), Expect = 3e-32
 Identities = 79/152 (51%), Positives = 93/152 (61%), Gaps = 2/152 (1%)
 Frame = -1

Query: 730 ELRKRRTRYDIYKRIDASYYGYRDEEDGILEKLEGPAEERMREEKVREWNEMEAIKREAK 551
           ELR+RRTRYDIYKRIDASYYGYRDEEDG+L +LEGPAEE MR E   EW  ++ ++REA+
Sbjct: 148 ELRRRRTRYDIYKRIDASYYGYRDEEDGVLARLEGPAEEAMRREAAEEWRRLDEVRREAR 207

Query: 550 RSVKSAEVGVVAKFL--XXXXXXXXXXXXXXXXXXXXXXXXXEFMVHVPLPDEKEIERMX 377
           + V S EV  V                               EF+VHVPLPDEKEIER  
Sbjct: 208 KGVVSGEVAEVTAVAREVLKEDEEEVVEEERAREREEERERREFVVHVPLPDEKEIERRV 267

Query: 376 XXXXXXXXLSKYTSKDLLEEQSEAKAMLNIHR 281
                   LS+Y S+ L+EEQ+EAK MLNI R
Sbjct: 268 LEKKKKDLLSRYASEGLVEEQTEAKDMLNIQR 299


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