BLASTX nr result

ID: Bupleurum21_contig00014264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014264
         (947 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263635.1| PREDICTED: formamidopyrimidine-DNA glycosyla...   226   8e-57
ref|XP_003542122.1| PREDICTED: formamidopyrimidine-DNA glycosyla...   220   3e-55
gb|EEE68448.1| hypothetical protein OsJ_26828 [Oryza sativa Japo...   215   1e-53
gb|EEC83332.1| hypothetical protein OsI_28720 [Oryza sativa Indi...   215   1e-53
gb|AAQ56451.1| putative glycosylase [Oryza sativa Japonica Group...   215   1e-53

>ref|XP_002263635.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Vitis
           vinifera]
          Length = 403

 Score =  226 bits (575), Expect = 8e-57
 Identities = 105/142 (73%), Positives = 127/142 (89%)
 Frame = +3

Query: 3   GPDALFEPMTAEDFFDAVRSKKTGIKALLLDQSFISGIGNWIADEVLYQARIHPLQISAS 182
           GPDAL EPMT ++F  ++  KK  IKALLLDQS+I+GIGNW+ADEVLY ARIHPLQ+++S
Sbjct: 147 GPDALLEPMTIDEFIKSLSKKKIAIKALLLDQSYIAGIGNWLADEVLYHARIHPLQVASS 206

Query: 183 ISKESCATLHQCITEVIEKAVEVGCDSSQFPTSWIFHSREKKPGKAFVDGKKIEFINAGG 362
           +++ESC TLHQCI +VIEKA+EVG DSSQFP++WIFHSREKKPGKAFVDGKKI+FI+AGG
Sbjct: 207 LTRESCETLHQCIKQVIEKAMEVGADSSQFPSNWIFHSREKKPGKAFVDGKKIDFISAGG 266

Query: 363 RTSAFVPELQKLTGNSAAKAPV 428
           RT+A+VPELQKL+G  AAKA V
Sbjct: 267 RTTAYVPELQKLSGTQAAKASV 288


>ref|XP_003542122.1| PREDICTED: formamidopyrimidine-DNA glycosylase-like [Glycine max]
          Length = 399

 Score =  220 bits (561), Expect = 3e-55
 Identities = 104/139 (74%), Positives = 123/139 (88%)
 Frame = +3

Query: 3   GPDALFEPMTAEDFFDAVRSKKTGIKALLLDQSFISGIGNWIADEVLYQARIHPLQISAS 182
           GPDALFEPMT E F +++  KKT IKALLLDQSFISGIGNW+ADEVLYQARIHP Q+++S
Sbjct: 147 GPDALFEPMTLEKFTESLHKKKTEIKALLLDQSFISGIGNWVADEVLYQARIHPRQVASS 206

Query: 183 ISKESCATLHQCITEVIEKAVEVGCDSSQFPTSWIFHSREKKPGKAFVDGKKIEFINAGG 362
           +S ESC+ L +CI EVIEKA+EVG +SSQ+PT+WIFHSREKKPGKAFVDGKKI+FI AGG
Sbjct: 207 LSNESCSNLSKCIKEVIEKAIEVGAESSQYPTNWIFHSREKKPGKAFVDGKKIDFITAGG 266

Query: 363 RTSAFVPELQKLTGNSAAK 419
           RT+A+VPELQKL+G+   K
Sbjct: 267 RTTAYVPELQKLSGSLDVK 285


>gb|EEE68448.1| hypothetical protein OsJ_26828 [Oryza sativa Japonica Group]
          Length = 415

 Score =  215 bits (548), Expect = 1e-53
 Identities = 102/137 (74%), Positives = 118/137 (86%)
 Frame = +3

Query: 3   GPDALFEPMTAEDFFDAVRSKKTGIKALLLDQSFISGIGNWIADEVLYQARIHPLQISAS 182
           GPDALFEP+  +DF +++  KK  IKALLLDQSFISGIGNWIADEVLYQARIHP+Q ++ 
Sbjct: 147 GPDALFEPLHLDDFVESLSRKKAPIKALLLDQSFISGIGNWIADEVLYQARIHPMQTASM 206

Query: 183 ISKESCATLHQCITEVIEKAVEVGCDSSQFPTSWIFHSREKKPGKAFVDGKKIEFINAGG 362
           ISKE C  LHQCI EVIEK++EVGC+SSQ+P +WIFHSREKKPGKAFV+GKKI+FI  GG
Sbjct: 207 ISKEKCKALHQCIIEVIEKSLEVGCNSSQYPENWIFHSREKKPGKAFVEGKKIDFITVGG 266

Query: 363 RTSAFVPELQKLTGNSA 413
           RTSA+VPELQKL G  A
Sbjct: 267 RTSAYVPELQKLDGIDA 283


>gb|EEC83332.1| hypothetical protein OsI_28720 [Oryza sativa Indica Group]
          Length = 415

 Score =  215 bits (548), Expect = 1e-53
 Identities = 102/137 (74%), Positives = 118/137 (86%)
 Frame = +3

Query: 3   GPDALFEPMTAEDFFDAVRSKKTGIKALLLDQSFISGIGNWIADEVLYQARIHPLQISAS 182
           GPDALFEP+  +DF +++  KK  IKALLLDQSFISGIGNWIADEVLYQARIHP+Q ++ 
Sbjct: 147 GPDALFEPLHLDDFVESLSRKKAPIKALLLDQSFISGIGNWIADEVLYQARIHPMQTASM 206

Query: 183 ISKESCATLHQCITEVIEKAVEVGCDSSQFPTSWIFHSREKKPGKAFVDGKKIEFINAGG 362
           ISKE C  LHQCI EVIEK++EVGC+SSQ+P +WIFHSREKKPGKAFV+GKKI+FI  GG
Sbjct: 207 ISKEKCKALHQCIIEVIEKSLEVGCNSSQYPENWIFHSREKKPGKAFVEGKKIDFITVGG 266

Query: 363 RTSAFVPELQKLTGNSA 413
           RTSA+VPELQKL G  A
Sbjct: 267 RTSAYVPELQKLDGIDA 283


>gb|AAQ56451.1| putative glycosylase [Oryza sativa Japonica Group]
           gi|34015285|gb|AAQ56476.1| putative glycosylase [Oryza
           sativa Japonica Group]
          Length = 405

 Score =  215 bits (548), Expect = 1e-53
 Identities = 102/137 (74%), Positives = 118/137 (86%)
 Frame = +3

Query: 3   GPDALFEPMTAEDFFDAVRSKKTGIKALLLDQSFISGIGNWIADEVLYQARIHPLQISAS 182
           GPDALFEP+  +DF +++  KK  IKALLLDQSFISGIGNWIADEVLYQARIHP+Q ++ 
Sbjct: 137 GPDALFEPLHLDDFVESLSRKKAPIKALLLDQSFISGIGNWIADEVLYQARIHPMQTASM 196

Query: 183 ISKESCATLHQCITEVIEKAVEVGCDSSQFPTSWIFHSREKKPGKAFVDGKKIEFINAGG 362
           ISKE C  LHQCI EVIEK++EVGC+SSQ+P +WIFHSREKKPGKAFV+GKKI+FI  GG
Sbjct: 197 ISKEKCKALHQCIIEVIEKSLEVGCNSSQYPENWIFHSREKKPGKAFVEGKKIDFITVGG 256

Query: 363 RTSAFVPELQKLTGNSA 413
           RTSA+VPELQKL G  A
Sbjct: 257 RTSAYVPELQKLDGIDA 273


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