BLASTX nr result

ID: Bupleurum21_contig00014256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014256
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001154580.1| uncharacterized protein [Arabidopsis thalian...   118   4e-25
dbj|BAE99681.1| hypothetical protein [Arabidopsis thaliana]           118   4e-25
ref|NP_182012.1| uncharacterized protein [Arabidopsis thaliana] ...   118   4e-25
ref|XP_002880143.1| predicted protein [Arabidopsis lyrata subsp....   115   4e-24
ref|XP_002273910.2| PREDICTED: UPF0565 protein C2orf69 homolog [...   114   6e-24

>ref|NP_001154580.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330255381|gb|AEC10475.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 319

 Score =  118 bits (296), Expect = 4e-25
 Identities = 61/114 (53%), Positives = 86/114 (75%), Gaps = 1/114 (0%)
 Frame = -3

Query: 339 HQPRTIVLGFSKGGMVLNQLMTEIAFLDINSAE-SLGKVDKTLDTGKLVQTENYIVPSSN 163
           H P+TIVLGFSKGG+V+NQLM+EI+ LD N A+ S   V+++    + +Q    I+P+S 
Sbjct: 151 HCPKTIVLGFSKGGVVMNQLMSEISSLDTNFAKTSSAMVEESTSQHEKIQ----IIPASK 206

Query: 162 ELLLDSITEIHFVDAGLNCAGAYLTDPDVIQRISKRLFHKAMSLAVVLHGTPRQ 1
           E  L+SI+E+H++D GLN +GAY+TD +V+QRIS+RL   A SL +V+HGTPRQ
Sbjct: 207 ESFLNSISEVHYIDVGLNSSGAYITDHNVVQRISQRLARGADSLRIVIHGTPRQ 260


>dbj|BAE99681.1| hypothetical protein [Arabidopsis thaliana]
          Length = 319

 Score =  118 bits (296), Expect = 4e-25
 Identities = 61/114 (53%), Positives = 86/114 (75%), Gaps = 1/114 (0%)
 Frame = -3

Query: 339 HQPRTIVLGFSKGGMVLNQLMTEIAFLDINSAE-SLGKVDKTLDTGKLVQTENYIVPSSN 163
           H P+TIVLGFSKGG+V+NQLM+EI+ LD N A+ S   V+++    + +Q    I+P+S 
Sbjct: 151 HCPKTIVLGFSKGGVVMNQLMSEISSLDTNFAKTSSAMVEESTSQHEKIQ----IIPASK 206

Query: 162 ELLLDSITEIHFVDAGLNCAGAYLTDPDVIQRISKRLFHKAMSLAVVLHGTPRQ 1
           E  L+SI+E+H++D GLN +GAY+TD +V+QRIS+RL   A SL +V+HGTPRQ
Sbjct: 207 ESFLNSISEVHYIDVGLNSSGAYITDHNVVQRISQRLARGADSLRIVIHGTPRQ 260


>ref|NP_182012.1| uncharacterized protein [Arabidopsis thaliana]
           gi|2344899|gb|AAC31839.1| unknown protein [Arabidopsis
           thaliana] gi|330255380|gb|AEC10474.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 400

 Score =  118 bits (296), Expect = 4e-25
 Identities = 61/114 (53%), Positives = 86/114 (75%), Gaps = 1/114 (0%)
 Frame = -3

Query: 339 HQPRTIVLGFSKGGMVLNQLMTEIAFLDINSAE-SLGKVDKTLDTGKLVQTENYIVPSSN 163
           H P+TIVLGFSKGG+V+NQLM+EI+ LD N A+ S   V+++    + +Q    I+P+S 
Sbjct: 232 HCPKTIVLGFSKGGVVMNQLMSEISSLDTNFAKTSSAMVEESTSQHEKIQ----IIPASK 287

Query: 162 ELLLDSITEIHFVDAGLNCAGAYLTDPDVIQRISKRLFHKAMSLAVVLHGTPRQ 1
           E  L+SI+E+H++D GLN +GAY+TD +V+QRIS+RL   A SL +V+HGTPRQ
Sbjct: 288 ESFLNSISEVHYIDVGLNSSGAYITDHNVVQRISQRLARGADSLRIVIHGTPRQ 341


>ref|XP_002880143.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325982|gb|EFH56402.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 329

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/114 (52%), Positives = 83/114 (72%), Gaps = 1/114 (0%)
 Frame = -3

Query: 339 HQPRTIVLGFSKGGMVLNQLMTEIAFLDINSAESLGKVDKTLDTGKLVQTENYIVPSSNE 160
           H PRTIVLGFSKGG+V+NQLM+EI+ LD N AE+      T++       +  I+P+S E
Sbjct: 160 HCPRTIVLGFSKGGVVINQLMSEISSLDTNFAET---TSATVEEPTSQHEKIQIIPASKE 216

Query: 159 LLLDSITEIHFVDAGLNCAGAYLTDPDVIQRISKRLFHKAMS-LAVVLHGTPRQ 1
             L+SI+E+H++D GLN +GAY+TD +V+QRIS+RL  +  S L +V+HGTPRQ
Sbjct: 217 SFLNSISEVHYIDVGLNSSGAYITDHNVVQRISQRLARRTDSLLRIVIHGTPRQ 270


>ref|XP_002273910.2| PREDICTED: UPF0565 protein C2orf69 homolog [Vitis vinifera]
           gi|147864514|emb|CAN82628.1| hypothetical protein
           VITISV_028129 [Vitis vinifera]
           gi|297734607|emb|CBI16658.3| unnamed protein product
           [Vitis vinifera]
          Length = 322

 Score =  114 bits (286), Expect = 6e-24
 Identities = 63/125 (50%), Positives = 82/125 (65%)
 Frame = -3

Query: 375 KPYQDGVCAPSLHQPRTIVLGFSKGGMVLNQLMTEIAFLDINSAESLGKVDKTLDTGKLV 196
           +P   G+ A   +QP+T +LGFSKGG VLNQL+TE+ F  + S  S   + ++      V
Sbjct: 144 EPCPLGLSASCSYQPKTFILGFSKGGTVLNQLVTELGFSKVASIRSSPHIKESD-----V 198

Query: 195 QTENYIVPSSNELLLDSITEIHFVDAGLNCAGAYLTDPDVIQRISKRLFHKAMSLAVVLH 16
           Q E  I+P+S E LL+SI EIH+VD GLN AGAY+TD DVI RISKR+      +  V+H
Sbjct: 199 QEEYQILPTSIESLLNSIAEIHYVDVGLNSAGAYITDQDVIYRISKRVAEGGGGIRFVVH 258

Query: 15  GTPRQ 1
           GTPRQ
Sbjct: 259 GTPRQ 263


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