BLASTX nr result

ID: Bupleurum21_contig00014249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014249
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278046.2| PREDICTED: phytoene dehydrogenase-like [Viti...   155   2e-52
ref|XP_002521265.1| Phytoene dehydrogenase, putative [Ricinus co...   152   6e-50
ref|XP_004147077.1| PREDICTED: phytoene dehydrogenase-like [Cucu...   144   1e-45
gb|ABR18453.1| unknown [Picea sitchensis]                             143   8e-44
emb|CBI37843.3| unnamed protein product [Vitis vinifera]              125   1e-43

>ref|XP_002278046.2| PREDICTED: phytoene dehydrogenase-like [Vitis vinifera]
          Length = 530

 Score =  155 bits (392), Expect(3) = 2e-52
 Identities = 75/103 (72%), Positives = 88/103 (85%)
 Frame = -3

Query: 382 ADAVILAVGISTIQDIIQDSATLCTKNEFLKVLNLESIDLLTVKLWLDKKVNMPYASNAC 203
           ADAV+LAVGIST+QDII++SA L T+ EFLKVLNL  ID+LTVKL  D+KVN+P A N C
Sbjct: 294 ADAVVLAVGISTLQDIIKNSAALSTREEFLKVLNLAGIDVLTVKLQFDRKVNIPKAVNTC 353

Query: 202 SGFDDLSGWTFFDLNVLHDKHKDDPGTVLQADFYHANELLPLK 74
           SGFDD  GWT+FDLN +HD++KDDP TVLQA+FYHANELL LK
Sbjct: 354 SGFDDSCGWTYFDLNAIHDEYKDDPVTVLQANFYHANELLLLK 396



 Score = 70.5 bits (171), Expect(3) = 2e-52
 Identities = 30/44 (68%), Positives = 37/44 (84%)
 Frame = -1

Query: 609 TVKEMIFEPWMNYMRNLNCKFLEGRRVTEFSVNEETGCISQVVC 478
           TV++ IF+PWM+YMR   C+FLE RRVT+F  NEETGCIS+VVC
Sbjct: 244 TVRDKIFKPWMDYMRANGCEFLESRRVTDFLFNEETGCISEVVC 287



 Score = 26.9 bits (58), Expect(3) = 2e-52
 Identities = 15/25 (60%), Positives = 15/25 (60%)
 Frame = -2

Query: 77  KDEDIIKKVMTCLSNCINDFENVSV 3
           KDE I  KVM  LS  I D EN SV
Sbjct: 396 KDELIAAKVMHQLSKYIKDLENASV 420


>ref|XP_002521265.1| Phytoene dehydrogenase, putative [Ricinus communis]
           gi|223539533|gb|EEF41121.1| Phytoene dehydrogenase,
           putative [Ricinus communis]
          Length = 530

 Score =  152 bits (385), Expect(3) = 6e-50
 Identities = 73/102 (71%), Positives = 86/102 (84%)
 Frame = -3

Query: 382 ADAVILAVGISTIQDIIQDSATLCTKNEFLKVLNLESIDLLTVKLWLDKKVNMPYASNAC 203
           ADAVILAVGIS +Q+++++SA L T+ EFLKVLNL  ID+LT KL LD+KVN+ +ASNAC
Sbjct: 295 ADAVILAVGISKVQELVKNSAALSTREEFLKVLNLAGIDILTCKLQLDRKVNLAHASNAC 354

Query: 202 SGFDDLSGWTFFDLNVLHDKHKDDPGTVLQADFYHANELLPL 77
           SGFDD   WTFFDLN LHD+HKD+  T LQADFYHANELLPL
Sbjct: 355 SGFDDSFSWTFFDLNALHDEHKDNQVTTLQADFYHANELLPL 396



 Score = 61.2 bits (147), Expect(3) = 6e-50
 Identities = 23/44 (52%), Positives = 33/44 (75%)
 Frame = -1

Query: 609 TVKEMIFEPWMNYMRNLNCKFLEGRRVTEFSVNEETGCISQVVC 478
           T++E IF PWM+ +R   C+FL+G +V +F +NEET CI +VVC
Sbjct: 245 TIREKIFSPWMDSLRTKGCRFLDGEKVIDFIINEETSCIEEVVC 288



 Score = 30.4 bits (67), Expect(3) = 6e-50
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -2

Query: 74  DEDIIKKVMTCLSNCINDFENVSV 3
           DE ++ K M+ LS CI DFEN  V
Sbjct: 398 DELVVTKTMSYLSKCIKDFENAVV 421


>ref|XP_004147077.1| PREDICTED: phytoene dehydrogenase-like [Cucumis sativus]
           gi|449518113|ref|XP_004166088.1| PREDICTED: phytoene
           dehydrogenase-like [Cucumis sativus]
          Length = 533

 Score =  144 bits (362), Expect(3) = 1e-45
 Identities = 67/103 (65%), Positives = 86/103 (83%)
 Frame = -3

Query: 385 EADAVILAVGISTIQDIIQDSATLCTKNEFLKVLNLESIDLLTVKLWLDKKVNMPYASNA 206
           EADA++ AVGIS +Q++I++SA L TK EF+KVLNL S+DLLTVKLW D+KVN+P ASN+
Sbjct: 297 EADAIVFAVGISVLQELIRNSAALYTKEEFVKVLNLRSVDLLTVKLWFDRKVNIPTASNS 356

Query: 205 CSGFDDLSGWTFFDLNVLHDKHKDDPGTVLQADFYHANELLPL 77
           CS  D+  GW+FF+LN + D++KD+  TVLQADFYHA ELLPL
Sbjct: 357 CSTLDNSFGWSFFNLNAIQDEYKDESVTVLQADFYHAIELLPL 399



 Score = 54.7 bits (130), Expect(3) = 1e-45
 Identities = 18/44 (40%), Positives = 34/44 (77%)
 Frame = -1

Query: 609 TVKEMIFEPWMNYMRNLNCKFLEGRRVTEFSVNEETGCISQVVC 478
           T KEMIF+PW++ + +  C+F+  R++T+ +V++ET C+S ++C
Sbjct: 248 TAKEMIFQPWIDLLESKGCRFVGSRKITDVTVDDETNCLSDILC 291



 Score = 31.6 bits (70), Expect(3) = 1e-45
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -2

Query: 74  DEDIIKKVMTCLSNCINDFENVSV 3
           DE I++KV + LS CI DFEN  V
Sbjct: 401 DEAIVEKVKSYLSTCIKDFENAIV 424


>gb|ABR18453.1| unknown [Picea sitchensis]
          Length = 574

 Score =  143 bits (361), Expect(3) = 8e-44
 Identities = 65/103 (63%), Positives = 84/103 (81%)
 Frame = -3

Query: 382 ADAVILAVGISTIQDIIQDSATLCTKNEFLKVLNLESIDLLTVKLWLDKKVNMPYASNAC 203
           ADAVI AVGI+ +Q I+ +S  L  + EFL VLNL +ID+L V++WLD+KV++P  SNAC
Sbjct: 339 ADAVIFAVGITALQRIVYNSPVLQQREEFLNVLNLGAIDVLAVRIWLDRKVDIPKPSNAC 398

Query: 202 SGFDDLSGWTFFDLNVLHDKHKDDPGTVLQADFYHANELLPLK 74
            GFDD +GWTFFDL  LHD++KD+PGTV++ADFYHAN+ LPLK
Sbjct: 399 FGFDDSTGWTFFDLTALHDEYKDEPGTVVEADFYHANQFLPLK 441



 Score = 53.9 bits (128), Expect(3) = 8e-44
 Identities = 22/44 (50%), Positives = 31/44 (70%)
 Frame = -1

Query: 609 TVKEMIFEPWMNYMRNLNCKFLEGRRVTEFSVNEETGCISQVVC 478
           TV E IF+PW+ +M+   C+FL  +RVT+F ++E TG IS V C
Sbjct: 289 TVGEKIFKPWIEFMKTRGCQFLANKRVTDFLLDENTGAISAVAC 332



 Score = 26.2 bits (56), Expect(3) = 8e-44
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 77  KDEDIIKKVMTCLSNCINDFENVSV 3
           KD+ I++KV   L+ CI +F   +V
Sbjct: 441 KDDQIVEKVKAYLTTCIEEFGKANV 465


>emb|CBI37843.3| unnamed protein product [Vitis vinifera]
          Length = 531

 Score =  125 bits (315), Expect(3) = 1e-43
 Identities = 63/104 (60%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
 Frame = -3

Query: 382 ADAVILAVGISTIQD-IIQDSATLCTKNEFLKVLNLESIDLLTVKLWLDKKVNMPYASNA 206
           ADA ++    S +++  +   A L T+ EFLKVLNL  ID+LTVKL  D+KVN+P A N 
Sbjct: 294 ADAPVIMFSTSLMENHSLTLLAALSTREEFLKVLNLAGIDVLTVKLQFDRKVNIPKAVNT 353

Query: 205 CSGFDDLSGWTFFDLNVLHDKHKDDPGTVLQADFYHANELLPLK 74
           CSGFDD  GWT+FDLN +HD++KDDP TVLQA+FYHANELL LK
Sbjct: 354 CSGFDDSCGWTYFDLNAIHDEYKDDPVTVLQANFYHANELLLLK 397



 Score = 70.5 bits (171), Expect(3) = 1e-43
 Identities = 30/44 (68%), Positives = 37/44 (84%)
 Frame = -1

Query: 609 TVKEMIFEPWMNYMRNLNCKFLEGRRVTEFSVNEETGCISQVVC 478
           TV++ IF+PWM+YMR   C+FLE RRVT+F  NEETGCIS+VVC
Sbjct: 244 TVRDKIFKPWMDYMRANGCEFLESRRVTDFLFNEETGCISEVVC 287



 Score = 26.9 bits (58), Expect(3) = 1e-43
 Identities = 15/25 (60%), Positives = 15/25 (60%)
 Frame = -2

Query: 77  KDEDIIKKVMTCLSNCINDFENVSV 3
           KDE I  KVM  LS  I D EN SV
Sbjct: 397 KDELIAAKVMHQLSKYIKDLENASV 421


Top