BLASTX nr result

ID: Bupleurum21_contig00014176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014176
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156816.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   177   8e-43
ref|XP_004152219.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   176   1e-42
ref|XP_002301515.1| predicted protein [Populus trichocarpa] gi|2...   174   7e-42
ref|XP_002515267.1| hypothetical protein RCOM_1346600 [Ricinus c...   172   3e-41
ref|XP_003554554.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   171   7e-41

>ref|XP_004156816.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           24-like [Cucumis sativus]
          Length = 774

 Score =  177 bits (449), Expect = 8e-43
 Identities = 92/138 (66%), Positives = 103/138 (74%), Gaps = 7/138 (5%)
 Frame = +3

Query: 114 MSKRKFGFEGFGINRQQTYNFDRSQAPQRLYVPPSSRAGGSHDNYEDTDLDNIDYD---- 281
           MSKRKFGFEGFGINRQ TYNF+RSQAPQRLYVPPSSR G  HDNYEDTD+DNI+YD    
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSR-GHGHDNYEDTDVDNIEYDDNDG 59

Query: 282 --AANEEISXXXXXXXXXXXXXXXXPLDAFMEGIHEEMKT-APAKAKDKVDKYRDDEEDD 452
             A+  +                  PLDAFMEGIHEEMK   P K K+KVDKYRDD+E+D
Sbjct: 60  EEASGNDDGGAGAAGASGAEEEEIDPLDAFMEGIHEEMKAPPPPKPKEKVDKYRDDDEED 119

Query: 453 PMESYLRAKKDIGLTLAS 506
           PMES+LRAKKD+GLTLA+
Sbjct: 120 PMESFLRAKKDVGLTLAA 137


>ref|XP_004152219.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Cucumis
           sativus]
          Length = 777

 Score =  176 bits (447), Expect = 1e-42
 Identities = 94/135 (69%), Positives = 104/135 (77%), Gaps = 4/135 (2%)
 Frame = +3

Query: 114 MSKRKFGFEGFGINRQQTYNFDRSQAPQRLYVPPSSRAGGSHDNYEDTDLDNIDYDAAN- 290
           MSKRKFGFEGFGINRQ TYNF+RSQAPQRLYVPPSSR G  HDNYEDTD+DNI+YD  + 
Sbjct: 1   MSKRKFGFEGFGINRQTTYNFERSQAPQRLYVPPSSR-GHGHDNYEDTDVDNIEYDDNDG 59

Query: 291 EEIS--XXXXXXXXXXXXXXXXPLDAFMEGIHEEMKT-APAKAKDKVDKYRDDEEDDPME 461
           EE S                  PLDAFMEGIHEEMK   P K K+KVDKYRDD+E+DPME
Sbjct: 60  EEASGNADGGAGASGAEEEEIDPLDAFMEGIHEEMKAPPPPKPKEKVDKYRDDDEEDPME 119

Query: 462 SYLRAKKDIGLTLAS 506
           S+LRAKKD+GLTLA+
Sbjct: 120 SFLRAKKDVGLTLAA 134


>ref|XP_002301515.1| predicted protein [Populus trichocarpa] gi|222843241|gb|EEE80788.1|
           predicted protein [Populus trichocarpa]
          Length = 807

 Score =  174 bits (441), Expect = 7e-42
 Identities = 95/137 (69%), Positives = 105/137 (76%), Gaps = 6/137 (4%)
 Frame = +3

Query: 114 MSKRKFGFEGFGINRQQTYNFDRSQAPQRLYVPPSSRAGGSHDNYEDTDLDNIDY---DA 284
           MSKRKFGFEGFGINRQ TYNF+RSQAPQRLYVPPSSR   +HDNYEDTDLDNIDY   DA
Sbjct: 1   MSKRKFGFEGFGINRQATYNFERSQAPQRLYVPPSSRQ--NHDNYEDTDLDNIDYDDNDA 58

Query: 285 ANEEISXXXXXXXXXXXXXXXXPLDAFMEGIHEEMKTA-PAKAKDKVDKYR--DDEEDDP 455
           A E                   PLDAFMEGIHEEM+ A P KAK+KV++Y+  DDEEDDP
Sbjct: 59  AKESAE-------NNGSAAEIDPLDAFMEGIHEEMRAAPPPKAKEKVERYKDDDDEEDDP 111

Query: 456 MESYLRAKKDIGLTLAS 506
           MES+LRAKKD+GLTLA+
Sbjct: 112 MESFLRAKKDLGLTLAA 128


>ref|XP_002515267.1| hypothetical protein RCOM_1346600 [Ricinus communis]
           gi|223545747|gb|EEF47251.1| hypothetical protein
           RCOM_1346600 [Ricinus communis]
          Length = 791

 Score =  172 bits (435), Expect = 3e-41
 Identities = 91/133 (68%), Positives = 101/133 (75%), Gaps = 2/133 (1%)
 Frame = +3

Query: 114 MSKRKFGFEGFGINRQQTYNFDRSQAPQRLYVPPSSRAGGSHDNYEDTDLDNIDYDAANE 293
           MSKRKFGFEGFGINRQ+TYNF++SQ PQRLYVPPS+R   SHDNYEDTDLD IDY   NE
Sbjct: 1   MSKRKFGFEGFGINRQKTYNFEQSQPPQRLYVPPSTRR--SHDNYEDTDLDEIDYAEENE 58

Query: 294 EISXXXXXXXXXXXXXXXXPLDAFMEGIHEEMKTA-PAKAKDKVDKYRDDEED-DPMESY 467
                              PLDAFMEGIHEEMK A P KAKDK +KYRDDE+D DPMES+
Sbjct: 59  NAK----ESNGAEENDEIDPLDAFMEGIHEEMKAAPPPKAKDKAEKYRDDEDDNDPMESF 114

Query: 468 LRAKKDIGLTLAS 506
           L+AKKD+GLTLA+
Sbjct: 115 LKAKKDVGLTLAA 127


>ref|XP_003554554.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Glycine
           max]
          Length = 768

 Score =  171 bits (432), Expect = 7e-41
 Identities = 83/131 (63%), Positives = 98/131 (74%)
 Frame = +3

Query: 114 MSKRKFGFEGFGINRQQTYNFDRSQAPQRLYVPPSSRAGGSHDNYEDTDLDNIDYDAANE 293
           MSKRKFGFEGFGINRQ TY+F+RSQ PQRLYVPPS+R G  HD+YEDTD+DNID+D  N 
Sbjct: 1   MSKRKFGFEGFGINRQSTYSFERSQPPQRLYVPPSARHG--HDHYEDTDIDNIDFDDNNN 58

Query: 294 EISXXXXXXXXXXXXXXXXPLDAFMEGIHEEMKTAPAKAKDKVDKYRDDEEDDPMESYLR 473
           +                  PLDAFMEGIHEEM+ AP   +   D+YRDDE+DDP+ES+L+
Sbjct: 59  DDGSKNNNGGGNDDDDEIDPLDAFMEGIHEEMRAAPPPKEKAEDRYRDDEDDDPLESFLK 118

Query: 474 AKKDIGLTLAS 506
           AKKD+GLTLAS
Sbjct: 119 AKKDLGLTLAS 129


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