BLASTX nr result

ID: Bupleurum21_contig00014159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014159
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328537.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002512311.1| Ubiquitin-protein ligase BRE1A, putative [Ri...    57   2e-06
ref|XP_002319036.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002328537.1| predicted protein [Populus trichocarpa] gi|222838252|gb|EEE76617.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/135 (26%), Positives = 65/135 (48%)
 Frame = -1

Query: 407 IAELNMQVANLKDTIXXXXXXXXXXXXXXKCLESEVGRFKDELGRTRSERDEARKSLKQE 228
           I +L+ +V  L+  I              K + SE   +KD   + R ERD A+KSL +E
Sbjct: 383 IVKLHEEVGQLRGDIFSMQESIKDREDKNKQVVSEASHYKDAFEKVRLERDTAQKSLGEE 442

Query: 227 KSCXXXXXXXXXXXXXXXXESNKAMEKIKNQKSSLSEQKKELENSCSVLKRDLTLVEKKH 48
           +                  E+ +   K+KN+  SL  QKKE+E+  + L+++  L++K  
Sbjct: 443 RKNAMNLRSKVLEMEKRVEETVEERAKMKNEHESLVSQKKEMESQVATLEKEKDLLQKHF 502

Query: 47  AETKKELDSKQAELE 3
            E ++++D  + ++E
Sbjct: 503 TEAERKIDELRTKIE 517


>ref|XP_002512311.1| Ubiquitin-protein ligase BRE1A, putative [Ricinus communis]
           gi|223548272|gb|EEF49763.1| Ubiquitin-protein ligase
           BRE1A, putative [Ricinus communis]
          Length = 622

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/135 (25%), Positives = 65/135 (48%)
 Frame = -1

Query: 407 IAELNMQVANLKDTIXXXXXXXXXXXXXXKCLESEVGRFKDELGRTRSERDEARKSLKQE 228
           I +L+ ++  L+D +              K L +EV  ++DE  + R ERD A ++L +E
Sbjct: 380 IVQLHKELCGLRDAVFVTQDSIKNQEDKNKQLVTEVNHYRDEYEQARLERDNAVRNLDEE 439

Query: 227 KSCXXXXXXXXXXXXXXXXESNKAMEKIKNQKSSLSEQKKELENSCSVLKRDLTLVEKKH 48
           K                  E+ K   K+K +  +L E KKE+E   S L ++  +++K  
Sbjct: 440 KKNGFNLTSKVLEMEKMIEETVKEFAKMKTEYENLLELKKEMEGQVSSLMKEKDMMQKNF 499

Query: 47  AETKKELDSKQAELE 3
            + ++E+D+ + +LE
Sbjct: 500 LDAEREIDALRTKLE 514


>ref|XP_002319036.1| predicted protein [Populus trichocarpa] gi|222857412|gb|EEE94959.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 38/135 (28%), Positives = 67/135 (49%)
 Frame = -1

Query: 407 IAELNMQVANLKDTIXXXXXXXXXXXXXXKCLESEVGRFKDELGRTRSERDEARKSLKQE 228
           I +L+ +V +L+D I              K + SE+  +K  L + R ERD A+KSL  E
Sbjct: 84  IEKLHKEVGHLRDDIFSMQESIKDQEVKYKQVASEISHYKGALEQVRLERDNAQKSLDGE 143

Query: 227 KSCXXXXXXXXXXXXXXXXESNKAMEKIKNQKSSLSEQKKELENSCSVLKRDLTLVEKKH 48
           K                  E+ K   K+K++  +L++QKKE+E   S+L+++  LV+K  
Sbjct: 144 KRIGMNLRSKVLEMEKRVEETVKDCAKMKSEHENLAKQKKEMETQVSLLEKEKDLVQKHL 203

Query: 47  AETKKELDSKQAELE 3
            E + ++   + ++E
Sbjct: 204 TEAEGKIIDLRNKME 218


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