BLASTX nr result

ID: Bupleurum21_contig00014152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014152
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...    68   7e-10
ref|XP_003604713.1| hypothetical protein MTR_4g016830 [Medicago ...    63   2e-08
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    62   6e-08
ref|XP_002532287.1| conserved hypothetical protein [Ricinus comm...    60   1e-07
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    60   2e-07

>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 37/114 (32%), Positives = 60/114 (52%)
 Frame = +3

Query: 6   FLAGKTMKFEGQVAVLEAESIGVLEAMLWTKNFPDKVVTIETDSLLTVNAVKKGAAHYLE 185
           F+ G      G   V  AE+IG+ EA+ W  +     V  E D+ + V+AV  GAA   E
Sbjct: 204 FVMGADGSSPGLFNVKLAEAIGLREAVQWVLSLGRSNVIFEYDAKVVVDAVLSGAADLFE 263

Query: 186 LGQVFQQCKEIMENNRKIKLEFVKKLANNVAHGMARLPCELNSYNIFTSPPQIL 347
            G V   C+ ++++     ++F++K AN VAH +AR     + +N+F+ PP  +
Sbjct: 264 FGAVIADCRLLLQHGCNYSVQFIRKQANLVAHSLARASHLQDGFNMFSVPPDCI 317


>ref|XP_003604713.1| hypothetical protein MTR_4g016830 [Medicago truncatula]
           gi|355505768|gb|AES86910.1| hypothetical protein
           MTR_4g016830 [Medicago truncatula]
          Length = 108

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/103 (32%), Positives = 56/103 (54%)
 Frame = +3

Query: 42  VAVLEAESIGVLEAMLWTKNFPDKVVTIETDSLLTVNAVKKGAAHYLELGQVFQQCKEIM 221
           + VLEAE+  + EA+    +   + V  ETD +   +A+   +AH  E+G +  QC+ ++
Sbjct: 1   MTVLEAEATALSEAIKLAISLGFQTVRFETDCMTLADAIHTTSAHLNEVGDIISQCRGLL 60

Query: 222 ENNRKIKLEFVKKLANNVAHGMARLPCELNSYNIFTSPPQILL 350
             N   K+ ++++ AN VAH +AR      S ++F S P  LL
Sbjct: 61  FTNTDFKVSYIRRQANRVAHSIARASLSHLSPHLFYSVPSTLL 103


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/116 (28%), Positives = 58/116 (50%)
 Frame = +3

Query: 6   FLAGKTMKFEGQVAVLEAESIGVLEAMLWTKNFPDKVVTIETDSLLTVNAVKKGAAHYLE 185
           FL   T  +EG     EAE++G+ +A+LW        V +E D  L V+++     +  E
Sbjct: 93  FLKAATNWYEGCPPPQEAEAVGLRDAILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAE 152

Query: 186 LGQVFQQCKEIMENNRKIKLEFVKKLANNVAHGMARLPCELNSYNIFTSPPQILLE 353
            G +   C+ +++     K+ FV++ AN VAH  AR+      + +  + P+ +LE
Sbjct: 153 FGSIIDDCRSLLQQFTNFKISFVRRQANVVAHSFARVSIFQPLFGLAFAKPESILE 208


>ref|XP_002532287.1| conserved hypothetical protein [Ricinus communis]
           gi|223528021|gb|EEF30102.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 346

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/122 (28%), Positives = 60/122 (49%)
 Frame = +3

Query: 3   LFLAGKTMKFEGQVAVLEAESIGVLEAMLWTKNFPDKVVTIETDSLLTVNAVKKGAAHYL 182
           +F+   +  +EG V V E+E++ + EA+ W +    + V  E D    V+AV    A   
Sbjct: 221 VFMCCASNCYEGLVQVRESETMRLREALSWIRGKWYQRVIFELDCQQIVHAVTNFLASVD 280

Query: 183 ELGQVFQQCKEIMENNRKIKLEFVKKLANNVAHGMARLPCELNSYNIFTSPPQILLETIM 362
           E G + ++C E++  N    + FVK+ AN +A+ +AR P       +   PP  +L  + 
Sbjct: 281 EFGSLIRECAELLAENNSYSVIFVKRQANEIAYMLARAPHSHAGLRVCFEPPTFILTLLF 340

Query: 363 YD 368
            D
Sbjct: 341 SD 342


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
 Frame = +3

Query: 6    FLAGKTMKFEGQVAVLEAESIGVLEAMLWTKNFPDKVVTIETDSLLTVNAVKKGAAHYLE 185
            F+ G    F  Q      E++GV E + W        + +ETD L  V A++  +     
Sbjct: 698  FMGGFAKPFPHQTLPKVVEALGVREVLSWIHERSRSRIVVETDCLRVVQAIQHKSCPNTS 757

Query: 186  LGQVFQQCKEIMENNRKIKLEFVKKLANNVAHGMARLPCELNSYNIF-TSPPQILLETIM 362
             G +   C +++++   +++ + ++ AN+ AH +A   C   S +I+  +PPQ +L  + 
Sbjct: 758  FGFIIVDCLDVLQHLVDVQVVYARRSANSAAHCLANGACSFTSLHIWGYTPPQCILSCLH 817

Query: 363  YD 368
            YD
Sbjct: 818  YD 819


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