BLASTX nr result

ID: Bupleurum21_contig00014143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014143
         (815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32242.3| unnamed protein product [Vitis vinifera]               86   1e-14
ref|NP_191849.3| CW-type zinc-finger protein [Arabidopsis thalia...    65   2e-08
emb|CAB83140.1| putative protein [Arabidopsis thaliana]                65   2e-08
ref|NP_193308.2| CW-type zinc-finger protein [Arabidopsis thalia...    64   5e-08
emb|CAB10351.1| hypothetical protein [Arabidopsis thaliana] gi|7...    64   5e-08

>emb|CBI32242.3| unnamed protein product [Vitis vinifera]
          Length = 1398

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 81/278 (29%), Positives = 116/278 (41%), Gaps = 21/278 (7%)
 Frame = +1

Query: 43   REISKDWVKDKLTFTGVVDDESVMHVVD---GAKYDQQAFRSSLMEKTRGELESSKKEIS 213
            RE +K  V+DKL F+  V +E +  + +   G         SS ++    +  +S  + S
Sbjct: 372  RESNKGVVRDKL-FSDTVQEELLEPIANQEVGWVDKPNGKVSSSLKVWEDKKANSLNDAS 430

Query: 214  DNLRGLGRAKGDRLHNLSKEQPGVSKRKRDINNELENHPKQKVVLSCTQYKQGRLGLNDG 393
              LR  G  KG++ +N  K     SK  + +N EL   PK K     T Y+Q  +     
Sbjct: 431  VYLRKDGNRKGEKTYNSIKADSNASKEGKVLNAELIEPPKLKAGQKATPYEQDSV----- 485

Query: 394  LKKLPLQDKTKSKGRQTNSRLTSQLVDEKLRSDDILECKQRAQKKVTKLSASNEDIHETR 573
              KLP   +  S G + N      LVD      ++ + K R      K     +D ++  
Sbjct: 486  --KLPSGKEHTSSGAKKN------LVDNYTPKSELEDIKLR------KEFGKPKDRYKDF 531

Query: 574  FG-----LRANKMDQLKMPSFDHM------------PKNQNVEIIKVKDETKDIACSQGQ 702
            FG        N +D L+MPS D +            PK     +    +     A     
Sbjct: 532  FGDINLEQEENGIDSLEMPSDDRLKESDMPPTSGAYPKAATNTLPPTGNGPNSNAAPAAV 591

Query: 703  ASEVVEE-WVQCESCDKWRLLPYSIKADQLPDKWFCSM 813
            A  V+EE WV C+ C KWRLLP  I  D LP+KW CSM
Sbjct: 592  APVVIEENWVCCDKCQKWRLLPIGINPDHLPEKWLCSM 629


>ref|NP_191849.3| CW-type zinc-finger protein [Arabidopsis thaliana]
            gi|332646887|gb|AEE80408.1| CW-type zinc-finger protein
            [Arabidopsis thaliana]
          Length = 1465

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 54/234 (23%), Positives = 102/234 (43%), Gaps = 26/234 (11%)
 Frame = +1

Query: 190  ESSKKEISDNL-----RGLGRAKGDRLHNLSKEQPGVSKRKRDINNELENHPKQKVVLSC 354
            E  K ++ DN      R +G+ KG +  +  K++   SK K     ELE HP +K     
Sbjct: 397  EDKKAKLGDNEASGYPRKVGKYKGSKASDSVKKESSASKAKSGHKVELE-HPLRK----- 450

Query: 355  TQYKQGRLGLNDGLKKLPLQDKTKSKGRQTNSRLTSQLVDEKLRSDDILECKQRAQKKVT 534
             +Y Q        +++ P    +K K +QT+    ++L  +  + + +    Q   KK  
Sbjct: 451  QKYDQ--------IEQEP-PSSSKFKEQQTSVVFETKLNGQAEKKEVVAVKPQSDSKKA- 500

Query: 535  KLSASNEDIHETRFG------------LRANKMDQLKMPSFDHMPKNQNVEIIK------ 660
                  ED ++  FG            ++  ++ +  +P  + MP+  ++ +++      
Sbjct: 501  ------EDTYKDFFGDIGDSEEEEEQDVKDLRISEKGLPPLEDMPEKSSLPLVEPQNVGP 554

Query: 661  ---VKDETKDIACSQGQASEVVEEWVQCESCDKWRLLPYSIKADQLPDKWFCSM 813
               ++    D +  +     + E WV C+ C KWRLLP+ +  + LP+KW C+M
Sbjct: 555  EPMLRKLGSDASLPKANPVIIQEHWVACDKCGKWRLLPFGVFPEDLPEKWMCTM 608


>emb|CAB83140.1| putative protein [Arabidopsis thaliana]
          Length = 1401

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 54/234 (23%), Positives = 102/234 (43%), Gaps = 26/234 (11%)
 Frame = +1

Query: 190  ESSKKEISDNL-----RGLGRAKGDRLHNLSKEQPGVSKRKRDINNELENHPKQKVVLSC 354
            E  K ++ DN      R +G+ KG +  +  K++   SK K     ELE HP +K     
Sbjct: 397  EDKKAKLGDNEASGYPRKVGKYKGSKASDSVKKESSASKAKSGHKVELE-HPLRK----- 450

Query: 355  TQYKQGRLGLNDGLKKLPLQDKTKSKGRQTNSRLTSQLVDEKLRSDDILECKQRAQKKVT 534
             +Y Q        +++ P    +K K +QT+    ++L  +  + + +    Q   KK  
Sbjct: 451  QKYDQ--------IEQEP-PSSSKFKEQQTSVVFETKLNGQAEKKEVVAVKPQSDSKKA- 500

Query: 535  KLSASNEDIHETRFG------------LRANKMDQLKMPSFDHMPKNQNVEIIK------ 660
                  ED ++  FG            ++  ++ +  +P  + MP+  ++ +++      
Sbjct: 501  ------EDTYKDFFGDIGDSEEEEEQDVKDLRISEKGLPPLEDMPEKSSLPLVEPQNVGP 554

Query: 661  ---VKDETKDIACSQGQASEVVEEWVQCESCDKWRLLPYSIKADQLPDKWFCSM 813
               ++    D +  +     + E WV C+ C KWRLLP+ +  + LP+KW C+M
Sbjct: 555  EPMLRKLGSDASLPKANPVIIQEHWVACDKCGKWRLLPFGVFPEDLPEKWMCTM 608


>ref|NP_193308.2| CW-type zinc-finger protein [Arabidopsis thaliana]
           gi|26450789|dbj|BAC42503.1| unknown protein [Arabidopsis
           thaliana] gi|30102754|gb|AAP21295.1| At4g15730
           [Arabidopsis thaliana] gi|332658241|gb|AEE83641.1|
           CW-type zinc-finger protein [Arabidopsis thaliana]
          Length = 1059

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 24/45 (53%), Positives = 31/45 (68%)
 Frame = +1

Query: 679 DIACSQGQASEVVEEWVQCESCDKWRLLPYSIKADQLPDKWFCSM 813
           D A +    S  ++ W QCESC+KWRLLPY +  ++LPDKW CSM
Sbjct: 404 DFAVAPSSTSVDLDYWAQCESCEKWRLLPYDLNTEKLPDKWLCSM 448


>emb|CAB10351.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268321|emb|CAB78615.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 1052

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 24/45 (53%), Positives = 31/45 (68%)
 Frame = +1

Query: 679 DIACSQGQASEVVEEWVQCESCDKWRLLPYSIKADQLPDKWFCSM 813
           D A +    S  ++ W QCESC+KWRLLPY +  ++LPDKW CSM
Sbjct: 430 DFAVAPSSTSVDLDYWAQCESCEKWRLLPYDLNTEKLPDKWLCSM 474


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