BLASTX nr result

ID: Bupleurum21_contig00014128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014128
         (1648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32261.3| unnamed protein product [Vitis vinifera]               90   2e-15
ref|XP_002268490.1| PREDICTED: zinc finger protein CONSTANS-LIKE...    90   2e-15
ref|XP_003521534.1| PREDICTED: zinc finger protein CONSTANS-LIKE...    79   4e-12
ref|NP_001241399.1| zinc finger protein CONSTANS-LIKE 13-like [G...    75   4e-11
ref|XP_002520678.1| hypothetical protein RCOM_0555710 [Ricinus c...    75   5e-11

>emb|CBI32261.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 48/107 (44%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
 Frame = +1

Query: 1   SDYLIWETPSVXXXXXXXXXXXXXHNFQAMGLPPLPKNRNTVCGQRKEEILCQLREMAKL 180
           SD+L+W+TP+V             HNFQAMG+PPLPKNR   CGQ K EI+ QLR++AK+
Sbjct: 113 SDFLVWDTPAVVNLDDLIVSTACDHNFQAMGVPPLPKNRGAPCGQHKAEIIHQLRQLAKI 172

Query: 181 EPGSDQIKQDLEPSSGFQSLVPDHDCQQLKTSFESKTEPTF-FPPYE 318
           E   D    D +P  GFQS +P    Q+         E  F FP YE
Sbjct: 173 ELSFDFDHGDAKPPIGFQSHIPKQLIQKENECNSCDHEVEFVFPTYE 219


>ref|XP_002268490.1| PREDICTED: zinc finger protein CONSTANS-LIKE 13-like isoform 1
           [Vitis vinifera]
          Length = 394

 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 48/107 (44%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
 Frame = +1

Query: 1   SDYLIWETPSVXXXXXXXXXXXXXHNFQAMGLPPLPKNRNTVCGQRKEEILCQLREMAKL 180
           SD+L+W+TP+V             HNFQAMG+PPLPKNR   CGQ K EI+ QLR++AK+
Sbjct: 164 SDFLVWDTPAVVNLDDLIVSTACDHNFQAMGVPPLPKNRGAPCGQHKAEIIHQLRQLAKI 223

Query: 181 EPGSDQIKQDLEPSSGFQSLVPDHDCQQLKTSFESKTEPTF-FPPYE 318
           E   D    D +P  GFQS +P    Q+         E  F FP YE
Sbjct: 224 ELSFDFDHGDAKPPIGFQSHIPKQLIQKENECNSCDHEVEFVFPTYE 270


>ref|XP_003521534.1| PREDICTED: zinc finger protein CONSTANS-LIKE 13-like [Glycine max]
          Length = 349

 Score = 79.0 bits (193), Expect = 4e-12
 Identities = 47/108 (43%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
 Frame = +1

Query: 1   SDYLIWETPSVXXXXXXXXXXXXXHNFQAMGLPPLPKNRNTVCGQRKEEILCQLREMAKL 180
           SD  +W++PS              H+FQAM +PPLPKNR   CGQ KEEIL QLRE+AK 
Sbjct: 140 SDLFVWDSPSFVTLDDLISSSPSSHSFQAMEVPPLPKNRKAACGQHKEEILSQLRELAKS 199

Query: 181 EPGSDQIKQDLEP--SSGFQSLVPDHDCQQLKTSFESKTEPTFFPPYE 318
           EP       DLEP  SSG            L + FE + E   FP +E
Sbjct: 200 EP------LDLEPYVSSG-----------NLSSGFEREPEADIFPSHE 230


>ref|NP_001241399.1| zinc finger protein CONSTANS-LIKE 13-like [Glycine max]
           gi|260513718|gb|ACX42571.1| CONSTANS-like zinc finger
           protein [Glycine max]
          Length = 351

 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 46/108 (42%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
 Frame = +1

Query: 1   SDYLIWETPSVXXXXXXXXXXXXXHNFQAMGLPPLPKNRNTVCGQRKEEILCQLREMAKL 180
           SD  +W+ PS              H+FQAM +PPLPKNR   CGQ KEEIL QLRE+AK 
Sbjct: 142 SDMFVWDAPSFVTLDDLISSSPSSHSFQAMKVPPLPKNRKAACGQHKEEILSQLRELAKS 201

Query: 181 EPGSDQIKQDLEP--SSGFQSLVPDHDCQQLKTSFESKTEPTFFPPYE 318
           EP       DLEP   SG            L   FE   E   FP +E
Sbjct: 202 EP------LDLEPYVQSG-----------NLSLGFERDPEADIFPSHE 232


>ref|XP_002520678.1| hypothetical protein RCOM_0555710 [Ricinus communis]
           gi|223540063|gb|EEF41640.1| hypothetical protein
           RCOM_0555710 [Ricinus communis]
          Length = 411

 Score = 75.1 bits (183), Expect = 5e-11
 Identities = 50/130 (38%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
 Frame = +1

Query: 1   SDYLIWETPSVXXXXXXXXXXXXXHNFQAMGLPPLPK----------------NRNTVCG 132
           SD LIWETP+V              NF A+G+PPLPK                NRN VCG
Sbjct: 164 SDLLIWETPAVVSIDDLIVSSDSGPNFPALGVPPLPKAIVFRFSLFYFSCKSQNRNAVCG 223

Query: 133 QRKEEILCQLREMAKLEPGSDQIKQDLEPSSGFQSLVPDH-DCQQLKTSFESKTEPTFFP 309
           Q KEEIL QLRE+A LEP  +    + EP+  FQS   ++   +      E    P   P
Sbjct: 224 QHKEEILRQLRELAGLEPDPNCHNPETEPTYVFQSAAGENMQTRMTHKCCEPVARPISSP 283

Query: 310 PYEV-*YHWL 336
            YE   ++WL
Sbjct: 284 SYEENIFNWL 293


Top