BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014083
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal doma...   248   8e-64
ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal doma...   248   1e-63
ref|XP_002519032.1| double-stranded RNA binding protein, putativ...   248   1e-63
ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|2...   243   3e-62
ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal doma...   229   7e-58

>ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 954

 Score =  248 bits (634), Expect = 8e-64
 Identities = 138/266 (51%), Positives = 176/266 (66%), Gaps = 5/266 (1%)
 Frame = +1

Query: 1    LSAYPSFSGEEFLQARSSPINKQPDS----SEEFAETPVRALQDIASKCRTKVEFRTALI 168
            LS+Y SFSG++   +RS   ++  DS    S   A+TPV  LQ+IA KC TKV+F ++L+
Sbjct: 663  LSSYRSFSGDDIPFSRSFSSHRDLDSESGHSVLHADTPVAVLQEIALKCGTKVDFISSLV 722

Query: 169  PSTVLQFSVEVWFAGQKIGAATGRTRKEAQQKATEDALLHLADNYIPSINPNTSPIHGDG 348
             ST LQFS+E WF+G+KIG   GRTRKEAQ KA ED++ HLAD Y+ S        +GD 
Sbjct: 723  ASTELQFSMEAWFSGKKIGHRVGRTRKEAQNKAAEDSIKHLADIYLSSAKDEPGSTYGDV 782

Query: 349  NRFLNANENGFVGDDNAFGYPSFREESPAFQHGLGPARVMDPRLEGPMNLMGPVSALKEL 528
            + F N N++G++G  ++ G     +E  A      P+RV+DPRL+     MG +S+LKEL
Sbjct: 783  SGFPNVNDSGYMGIASSLGNQPLSKEDSASFSTASPSRVLDPRLDVSKRSMGSISSLKEL 842

Query: 529  CMMEGLAVAFHPQP-QYSTNMGQHNEVYAQVEVDGQVLGKGSGSTWDEAKMQAADKALGS 705
            CMMEGL V F   P   STN  Q +EV+AQVE+DG+V GKG G TWDEAKMQAA+KALGS
Sbjct: 843  CMMEGLDVNFLSAPAPVSTNSVQKDEVHAQVEIDGKVFGKGIGLTWDEAKMQAAEKALGS 902

Query: 706  LRSMIGQFSHKCQDSPRTLQGMPNKR 783
            LRS +GQ   K Q SPR  QG  NKR
Sbjct: 903  LRSKLGQSIQKRQSSPRPHQGFSNKR 928


>ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 960

 Score =  248 bits (633), Expect = 1e-63
 Identities = 135/266 (50%), Positives = 175/266 (65%), Gaps = 5/266 (1%)
 Frame = +1

Query: 1    LSAYPSFSGEEFLQARSSPINKQPDS----SEEFAETPVRALQDIASKCRTKVEFRTALI 168
            LS+Y SFSG++   +RSS  ++  DS    S   A+TPV  L +IA KC TKV+F ++L+
Sbjct: 669  LSSYRSFSGDDIPFSRSSSSHRDLDSESGHSVLHADTPVAVLHEIALKCGTKVDFMSSLV 728

Query: 169  PSTVLQFSVEVWFAGQKIGAATGRTRKEAQQKATEDALLHLADNYIPSINPNTSPIHGDG 348
             ST L+FS+E WF+G+KIG   GRTRKEAQ KA +D++ HLAD Y+ S        +GD 
Sbjct: 729  ASTELKFSLEAWFSGKKIGHGFGRTRKEAQNKAAKDSIEHLADIYLSSAKDEPGSTYGDV 788

Query: 349  NRFLNANENGFVGDDNAFGYPSFREESPAFQHGLGPARVMDPRLEGPMNLMGPVSALKEL 528
            + F N N+NG++G  ++ G     +E  A      P+R +DPRL+     MG +SALKEL
Sbjct: 789  SGFPNVNDNGYMGIASSLGNQPLSKEDSASFSSASPSRALDPRLDVSKRSMGSISALKEL 848

Query: 529  CMMEGLAVAFHPQP-QYSTNMGQHNEVYAQVEVDGQVLGKGSGSTWDEAKMQAADKALGS 705
            CMMEGL V F   P   STN  Q +EV+AQVE+DG++ GKG G TWDEAKMQAA+KALG+
Sbjct: 849  CMMEGLGVNFLSTPAPVSTNSVQKDEVHAQVEIDGKIFGKGIGLTWDEAKMQAAEKALGN 908

Query: 706  LRSMIGQFSHKCQDSPRTLQGMPNKR 783
            LRS +GQ   K Q SPR  QG  NKR
Sbjct: 909  LRSKLGQSIQKMQSSPRPHQGFSNKR 934


>ref|XP_002519032.1| double-stranded RNA binding protein, putative [Ricinus communis]
            gi|223541695|gb|EEF43243.1| double-stranded RNA binding
            protein, putative [Ricinus communis]
          Length = 978

 Score =  248 bits (632), Expect = 1e-63
 Identities = 133/265 (50%), Positives = 178/265 (67%), Gaps = 5/265 (1%)
 Frame = +1

Query: 1    LSAYPSFSGEEFLQARSSPINK----QPDSSEEFAETPVRALQDIASKCRTKVEFRTALI 168
            +S Y S SGEE   +RSS  N+    + D +   AETPVR L +I+ KC  KVEF+ +L+
Sbjct: 687  MSNYQSLSGEENSLSRSSSSNRDLDVESDRAVSSAETPVRVLHEISMKCGAKVEFKHSLV 746

Query: 169  PSTVLQFSVEVWFAGQKIGAATGRTRKEAQQKATEDALLHLADNYIPSINPNTSPIHGDG 348
             S  LQFSVE WFAG+++G   GRTR+EAQ  A E ++ +LA+ YI    P+   +HGD 
Sbjct: 747  NSRDLQFSVEAWFAGERVGEGFGRTRREAQSVAAEASIKNLANIYISRAKPDNGALHGDA 806

Query: 349  NRFLNANENGFVGDDNAFG-YPSFREESPAFQHGLGPARVMDPRLEGPMNLMGPVSALKE 525
            +++ +AN+NGF+G  N+FG  P  ++E  ++      + ++DPRLE     M  V+ALKE
Sbjct: 807  SKYSSANDNGFLGHVNSFGSQPLPKDEILSYSDSSEQSGLLDPRLESSKKSMSSVNALKE 866

Query: 526  LCMMEGLAVAFHPQPQYSTNMGQHNEVYAQVEVDGQVLGKGSGSTWDEAKMQAADKALGS 705
             CMMEGL V F  Q   S+N  Q+ EV+AQVE+DGQV+GKG GST+DEAKMQAA+KALGS
Sbjct: 867  FCMMEGLGVNFLAQTPLSSNSVQNAEVHAQVEIDGQVMGKGIGSTFDEAKMQAAEKALGS 926

Query: 706  LRSMIGQFSHKCQDSPRTLQGMPNK 780
            LR+  G+F  K Q SPR + GMPNK
Sbjct: 927  LRTTFGRFPPKRQGSPRPVPGMPNK 951


>ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|222847981|gb|EEE85528.1|
            predicted protein [Populus trichocarpa]
          Length = 967

 Score =  243 bits (620), Expect = 3e-62
 Identities = 138/264 (52%), Positives = 174/264 (65%), Gaps = 4/264 (1%)
 Frame = +1

Query: 4    SAYPSFSGEEFLQARSSPINKQPDSSEEFA--ETPVRALQDIASKCRTKVEFRTALIPST 177
            S YPSF GE  L   SS  +   +S   F+  ETPV  LQ+IA KC TKVEFR ALI ++
Sbjct: 687  SNYPSFQGECPLSRSSSNRDLDLESERAFSSTETPVEVLQEIAMKCGTKVEFRPALIATS 746

Query: 178  VLQFSVEVWFAGQKIGAATGRTRKEAQQKATEDALLHLADNY-IPSINPNTSPIHGDGNR 354
             LQFS+E WF G+K+G  TG+TR+EAQ++A E ++  LA       I+  + P       
Sbjct: 747  DLQFSIETWFVGEKVGEGTGKTRREAQRQAAEGSIKKLAGKISYHDISYYSYP------- 799

Query: 355  FLNANENGFVGDDNAFG-YPSFREESPAFQHGLGPARVMDPRLEGPMNLMGPVSALKELC 531
              +AN+NGF+GD N+FG  P  ++E+  +     P+R++D RLEG    MG V+ALKE C
Sbjct: 800  --SANDNGFLGDMNSFGNQPLLKDENITYSATSEPSRLLDQRLEGSKKSMGSVTALKEFC 857

Query: 532  MMEGLAVAFHPQPQYSTNMGQHNEVYAQVEVDGQVLGKGSGSTWDEAKMQAADKALGSLR 711
            M EGL V F  Q   STN     EV+AQVE+DGQVLGKG G TWDEAKMQAA+KALGSLR
Sbjct: 858  MTEGLGVNFLAQTPLSTNSIPGEEVHAQVEIDGQVLGKGIGLTWDEAKMQAAEKALGSLR 917

Query: 712  SMIGQFSHKCQDSPRTLQGMPNKR 783
            +M GQ++ K Q SPR +QGMPNKR
Sbjct: 918  TMFGQYTPKRQGSPRLMQGMPNKR 941


>ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 958

 Score =  229 bits (583), Expect = 7e-58
 Identities = 127/266 (47%), Positives = 165/266 (62%), Gaps = 5/266 (1%)
 Frame = +1

Query: 1    LSAYPSFSGEEFLQARSSPINKQPDSSEE----FAETPVRALQDIASKCRTKVEFRTALI 168
            LS+Y SF G++   + SS  N+  DS        A+     LQ+IA KC TKVEF ++L+
Sbjct: 667  LSSYHSFPGDDIPLSGSSYSNRDFDSESGRSLFHADITAGVLQEIALKCGTKVEFLSSLV 726

Query: 169  PSTVLQFSVEVWFAGQKIGAATGRTRKEAQQKATEDALLHLADNYIPSINPNTSPIHGDG 348
             ST LQFS+E WFAG+K+G   GRTR+EAQ KA E ++  LAD Y+     ++   +GD 
Sbjct: 727  ASTALQFSIEAWFAGKKVGEGFGRTRREAQNKAAECSIKQLADIYMSHAKDDSGSTYGDV 786

Query: 349  NRFLNANENGFVGDDNAFGYPSFREESPAFQHGLGPARVMDPRLEGPMNLMGPVSALKEL 528
            + F  +N NGFV   N+ G     +ES +F      +RV DPRLE        +SALKE 
Sbjct: 787  SGFHGSNNNGFVSSGNSLGNQLLPKESVSFSTSSDSSRVSDPRLEVSKRSTDSISALKEF 846

Query: 529  CMMEGLAVAFHPQP-QYSTNMGQHNEVYAQVEVDGQVLGKGSGSTWDEAKMQAADKALGS 705
            CMMEGLA  F   P   ST+  Q +EV+AQVE+DGQ+ GKG G TW+EAKMQAA KAL S
Sbjct: 847  CMMEGLAANFQSSPAPASTHFAQKDEVHAQVEIDGQIFGKGFGLTWEEAKMQAAKKALES 906

Query: 706  LRSMIGQFSHKCQDSPRTLQGMPNKR 783
            LR+M  Q + K   SPR++QG+ NKR
Sbjct: 907  LRTMFNQGTRKRHGSPRSMQGLANKR 932