BLASTX nr result

ID: Bupleurum21_contig00014061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014061
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD95789.1| LSD-One-Like 1 [Brassica rapa]                        202   5e-50
ref|XP_002528249.1| conserved hypothetical protein [Ricinus comm...   200   3e-49
ref|XP_004148489.1| PREDICTED: protein LOL1-like isoform 1 [Cucu...   199   6e-49
ref|NP_849742.2| lsd one like 1 protein [Arabidopsis thaliana] g...   198   8e-49
ref|NP_564405.1| lsd one like 1 protein [Arabidopsis thaliana] g...   198   8e-49

>dbj|BAD95789.1| LSD-One-Like 1 [Brassica rapa]
          Length = 155

 Score =  202 bits (514), Expect = 5e-50
 Identities = 95/126 (75%), Positives = 106/126 (84%)
 Frame = +2

Query: 287 TGSQNQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXXGTEMAQLVCGGCHTLLMYIRG 466
           TG Q+QLVCSGCRNLL+YPVGATS               GTEMAQLVCGGCHTLLMYIRG
Sbjct: 30  TGGQSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRG 89

Query: 467 ATSVKCTCCHTVNLAMEANQVAHVSCGNCQMLLMYQYGAQSVKCAVCQFVTSVGVPTSTM 646
           ATSV+C+CCHTVNLA+EANQVAHV+CG+C+MLLMYQYGA+SVKCAVC F+TSVG  TST 
Sbjct: 90  ATSVQCSCCHTVNLALEANQVAHVNCGSCKMLLMYQYGARSVKCAVCSFITSVGGSTSTT 149

Query: 647 DQKLNS 664
           DQKLN+
Sbjct: 150 DQKLNN 155


>ref|XP_002528249.1| conserved hypothetical protein [Ricinus communis]
           gi|223532335|gb|EEF34134.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 147

 Score =  200 bits (508), Expect = 3e-49
 Identities = 93/125 (74%), Positives = 104/125 (83%)
 Frame = +2

Query: 290 GSQNQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXXGTEMAQLVCGGCHTLLMYIRGA 469
           G+Q+QLVCSGCRNLLLYP GATS               GTEMAQLVCGGCHTLLMYIRGA
Sbjct: 23  GAQSQLVCSGCRNLLLYPAGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGA 82

Query: 470 TSVKCTCCHTVNLAMEANQVAHVSCGNCQMLLMYQYGAQSVKCAVCQFVTSVGVPTSTMD 649
           TSV+C+CCHT+NLAMEANQVAHV+CGNC+MLLMYQYGA+SVKC+VC FVT+VG  TST +
Sbjct: 83  TSVQCSCCHTINLAMEANQVAHVNCGNCRMLLMYQYGARSVKCSVCNFVTAVGASTSTTE 142

Query: 650 QKLNS 664
           QK NS
Sbjct: 143 QKFNS 147


>ref|XP_004148489.1| PREDICTED: protein LOL1-like isoform 1 [Cucumis sativus]
           gi|449461521|ref|XP_004148490.1| PREDICTED: protein
           LOL1-like isoform 2 [Cucumis sativus]
           gi|449523109|ref|XP_004168567.1| PREDICTED: protein
           LOL1-like isoform 1 [Cucumis sativus]
           gi|449523111|ref|XP_004168568.1| PREDICTED: protein
           LOL1-like isoform 2 [Cucumis sativus]
          Length = 144

 Score =  199 bits (505), Expect = 6e-49
 Identities = 94/121 (77%), Positives = 103/121 (85%)
 Frame = +2

Query: 293 SQNQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXXGTEMAQLVCGGCHTLLMYIRGAT 472
           +Q+QLVCSGCRNLLLYPVGATS               GTEMAQLVCGGCHTLLMYIRGAT
Sbjct: 23  TQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGAT 82

Query: 473 SVKCTCCHTVNLAMEANQVAHVSCGNCQMLLMYQYGAQSVKCAVCQFVTSVGVPTSTMDQ 652
           SV+C+CCHTVNLA+EANQVAHVSCGNC+MLLMYQYGA+SVKCAVC FVTSVG+ TS +DQ
Sbjct: 83  SVQCSCCHTVNLALEANQVAHVSCGNCRMLLMYQYGARSVKCAVCNFVTSVGMSTSAIDQ 142

Query: 653 K 655
           K
Sbjct: 143 K 143


>ref|NP_849742.2| lsd one like 1 protein [Arabidopsis thaliana]
           gi|332193378|gb|AEE31499.1| lsd one like 1 protein
           [Arabidopsis thaliana]
          Length = 187

 Score =  198 bits (504), Expect = 8e-49
 Identities = 94/126 (74%), Positives = 102/126 (80%)
 Frame = +2

Query: 287 TGSQNQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXXGTEMAQLVCGGCHTLLMYIRG 466
           T  Q+QLVCSGCRNLL+YPVGATS               GTEMAQLVCGGCHTLLMYIRG
Sbjct: 62  TSGQSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRG 121

Query: 467 ATSVKCTCCHTVNLAMEANQVAHVSCGNCQMLLMYQYGAQSVKCAVCQFVTSVGVPTSTM 646
           ATSV+C+CCHTVNLA+EANQVAHV+CGNC MLLMYQYGA+SVKCAVC FVTSVG  TST 
Sbjct: 122 ATSVQCSCCHTVNLALEANQVAHVNCGNCMMLLMYQYGARSVKCAVCNFVTSVGGSTSTT 181

Query: 647 DQKLNS 664
           D K N+
Sbjct: 182 DSKFNN 187


>ref|NP_564405.1| lsd one like 1 protein [Arabidopsis thaliana]
           gi|186479127|ref|NP_001117399.1| lsd one like 1 protein
           [Arabidopsis thaliana]
           gi|75163743|sp|Q93ZB1.1|LOL1_ARATH RecName: Full=Protein
           LOL1; AltName: Full=Protein LSD ONE LIKE 1;
           Short=AtLOL1; AltName: Full=Putative zinc finger LOL1
           gi|16323143|gb|AAL15306.1| At1g32540/T9G5_1 [Arabidopsis
           thaliana] gi|21436015|gb|AAM51585.1| At1g32540/T9G5_1
           [Arabidopsis thaliana] gi|33867796|gb|AAQ55219.1|
           LSD1-like [Arabidopsis thaliana]
           gi|332193377|gb|AEE31498.1| lsd one like 1 protein
           [Arabidopsis thaliana] gi|332193379|gb|AEE31500.1| lsd
           one like 1 protein [Arabidopsis thaliana]
          Length = 154

 Score =  198 bits (504), Expect = 8e-49
 Identities = 94/126 (74%), Positives = 102/126 (80%)
 Frame = +2

Query: 287 TGSQNQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXXGTEMAQLVCGGCHTLLMYIRG 466
           T  Q+QLVCSGCRNLL+YPVGATS               GTEMAQLVCGGCHTLLMYIRG
Sbjct: 29  TSGQSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRG 88

Query: 467 ATSVKCTCCHTVNLAMEANQVAHVSCGNCQMLLMYQYGAQSVKCAVCQFVTSVGVPTSTM 646
           ATSV+C+CCHTVNLA+EANQVAHV+CGNC MLLMYQYGA+SVKCAVC FVTSVG  TST 
Sbjct: 89  ATSVQCSCCHTVNLALEANQVAHVNCGNCMMLLMYQYGARSVKCAVCNFVTSVGGSTSTT 148

Query: 647 DQKLNS 664
           D K N+
Sbjct: 149 DSKFNN 154


Top