BLASTX nr result

ID: Bupleurum21_contig00014058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014058
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   131   5e-29
emb|CBI37715.3| unnamed protein product [Vitis vinifera]              131   5e-29
ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putativ...   122   4e-26
ref|XP_003517532.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   110   2e-22
ref|XP_003537899.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   107   1e-21

>ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Vitis
           vinifera]
          Length = 1147

 Score =  131 bits (330), Expect = 5e-29
 Identities = 64/84 (76%), Positives = 73/84 (86%)
 Frame = -3

Query: 256 SPRKKGDEVLIDKADEKSREDDVEEEQRKLDEEMEKRRRRVQEWQELKRKAEESEREKLG 77
           SPRKK D+  +DK + ++RE+D+EEEQRKLDEEMEKRRRRVQEWQELKRK EESEREKLG
Sbjct: 239 SPRKKSDDDDLDKKERRTREEDLEEEQRKLDEEMEKRRRRVQEWQELKRKREESEREKLG 298

Query: 76  VDAVIDDLKSGKTWTLEGESDDEE 5
             A  D+ KSGKTWTLEGESDDE+
Sbjct: 299 EAANADEPKSGKTWTLEGESDDED 322


>emb|CBI37715.3| unnamed protein product [Vitis vinifera]
          Length = 471

 Score =  131 bits (330), Expect = 5e-29
 Identities = 64/84 (76%), Positives = 73/84 (86%)
 Frame = -3

Query: 256 SPRKKGDEVLIDKADEKSREDDVEEEQRKLDEEMEKRRRRVQEWQELKRKAEESEREKLG 77
           SPRKK D+  +DK + ++RE+D+EEEQRKLDEEMEKRRRRVQEWQELKRK EESEREKLG
Sbjct: 239 SPRKKSDDDDLDKKERRTREEDLEEEQRKLDEEMEKRRRRVQEWQELKRKREESEREKLG 298

Query: 76  VDAVIDDLKSGKTWTLEGESDDEE 5
             A  D+ KSGKTWTLEGESDDE+
Sbjct: 299 EAANADEPKSGKTWTLEGESDDED 322


>ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223530219|gb|EEF32123.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 1173

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/85 (68%), Positives = 73/85 (85%)
 Frame = -3

Query: 256 SPRKKGDEVLIDKADEKSREDDVEEEQRKLDEEMEKRRRRVQEWQELKRKAEESEREKLG 77
           SPRKK  E  +DK ++K+RE+++E+EQ++LDEEMEKRRRRVQEWQEL+RK EESEREK G
Sbjct: 242 SPRKKSGEDELDKKEKKTREEELEDEQKRLDEEMEKRRRRVQEWQELRRKKEESEREKHG 301

Query: 76  VDAVIDDLKSGKTWTLEGESDDEEA 2
             +  D+ ++GKTWTLEGESDDEEA
Sbjct: 302 EASNADEPQTGKTWTLEGESDDEEA 326


>ref|XP_003517532.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Glycine
           max]
          Length = 1104

 Score =  110 bits (274), Expect = 2e-22
 Identities = 57/87 (65%), Positives = 71/87 (81%), Gaps = 3/87 (3%)
 Frame = -3

Query: 256 SPRKKGDEVLIDKADEK---SREDDVEEEQRKLDEEMEKRRRRVQEWQELKRKAEESERE 86
           SPRKK  E   D  DE+   +RE+++E+EQ++LDEEMEKRRRRVQEWQEL+RK EE+ERE
Sbjct: 195 SPRKKSGEDDSDTKDEEKKPTREEEMEDEQKRLDEEMEKRRRRVQEWQELRRKKEEAERE 254

Query: 85  KLGVDAVIDDLKSGKTWTLEGESDDEE 5
           K G +A  ++ +SGKTWTLEGESDDEE
Sbjct: 255 KQG-EASANEPESGKTWTLEGESDDEE 280


>ref|XP_003537899.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Glycine
           max]
          Length = 1107

 Score =  107 bits (266), Expect = 1e-21
 Identities = 56/87 (64%), Positives = 70/87 (80%), Gaps = 3/87 (3%)
 Frame = -3

Query: 256 SPRKKGDEVLIDKADEK---SREDDVEEEQRKLDEEMEKRRRRVQEWQELKRKAEESERE 86
           SPRKK      D  DE+   +RE+++E+EQ++LDEEMEKRRRRVQEWQEL+RK EE+ERE
Sbjct: 198 SPRKKSGGDDSDTKDEEKKPTREEEMEDEQKRLDEEMEKRRRRVQEWQELRRKREEAERE 257

Query: 85  KLGVDAVIDDLKSGKTWTLEGESDDEE 5
           K G +A  ++ +SGKTWTLEGESDDEE
Sbjct: 258 KHG-EASANEPESGKTWTLEGESDDEE 283


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