BLASTX nr result

ID: Bupleurum21_contig00014039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014039
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003567049.1| PREDICTED: uncharacterized protein LOC100824...   127   1e-27
gb|ADN34114.1| retrotransposon protein [Cucumis melo subsp. melo]     122   3e-26
emb|CAN65842.1| hypothetical protein VITISV_027369 [Vitis vinifera]   121   5e-26
gb|ADN33754.1| retrotransposon protein [Cucumis melo subsp. melo]     120   1e-25
ref|XP_003632575.1| PREDICTED: uncharacterized protein LOC100852...   116   2e-24

>ref|XP_003567049.1| PREDICTED: uncharacterized protein LOC100824798 [Brachypodium
           distachyon]
          Length = 225

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/84 (70%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
 Frame = -3

Query: 250 MEFVFVLSGWEGSAHDGRVLRDAISRPNGLKVPQDCYYLVDVGYTNCEGFLAPYRGHRYH 71
           M+++++L GWEGSAHDGRVLRDAISRPNGL+VP D YYLVD  YTN +GFLAPYRG RYH
Sbjct: 118 MKYIYMLPGWEGSAHDGRVLRDAISRPNGLRVPADQYYLVDARYTNGKGFLAPYRGQRYH 177

Query: 70  LKEW-GDRQPVSAEEYFNMKHSKA 2
           +  W     P SAEEYFNM H+KA
Sbjct: 178 IGGWTAQNPPNSAEEYFNMCHAKA 201


>gb|ADN34114.1| retrotransposon protein [Cucumis melo subsp. melo]
          Length = 657

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/84 (66%), Positives = 68/84 (80%), Gaps = 2/84 (2%)
 Frame = -3

Query: 247 EFVFVLSGWEGSAHDGRVLRDAISRPNGLKVPQDCYYLVDVGYTNCEGFLAPYRGHRYHL 68
           +FV+VL+GWEGSA D R+LRDA+SRPN LKVP+  YYLVDVGY N EGFLAPYRG RYHL
Sbjct: 181 DFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHL 240

Query: 67  KEW--GDRQPVSAEEYFNMKHSKA 2
           +EW   +  P +++E+FNMKH  A
Sbjct: 241 QEWRGPENAPSTSKEFFNMKHYSA 264


>emb|CAN65842.1| hypothetical protein VITISV_027369 [Vitis vinifera]
          Length = 579

 Score =  121 bits (304), Expect = 5e-26
 Identities = 56/84 (66%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
 Frame = -3

Query: 250 MEFVFVLSGWEGSAHDGRVLRDAISRPNGLKVPQDCYYLVDVGYTNCEGFLAPYRGHRYH 71
           M+F++VL GWEGS  D RVLRDA+SR NGL VP   YYLVDVGYTN +GFLAPYRG RYH
Sbjct: 211 MQFIYVLPGWEGSTSDSRVLRDAVSRRNGLTVPHGYYYLVDVGYTNGKGFLAPYRGQRYH 270

Query: 70  LKEWGD-RQPVSAEEYFNMKHSKA 2
           L +W +   P + EE+FNMKHS A
Sbjct: 271 LNDWREGHMPTTHEEFFNMKHSAA 294


>gb|ADN33754.1| retrotransposon protein [Cucumis melo subsp. melo]
          Length = 623

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/84 (65%), Positives = 66/84 (78%), Gaps = 2/84 (2%)
 Frame = -3

Query: 247 EFVFVLSGWEGSAHDGRVLRDAISRPNGLKVPQDCYYLVDVGYTNCEGFLAPYRGHRYHL 68
           +FV+VL+GWEGSA D R+LRDAIS+ NGL+VP+  YYL D GY N EGFLAPY+G RYHL
Sbjct: 153 DFVYVLAGWEGSAADSRILRDAISQENGLQVPKGYYYLCDAGYPNAEGFLAPYKGQRYHL 212

Query: 67  KEW--GDRQPVSAEEYFNMKHSKA 2
           +EW      P +A+EYFNMKHS A
Sbjct: 213 QEWRGAANAPTNAKEYFNMKHSSA 236


>ref|XP_003632575.1| PREDICTED: uncharacterized protein LOC100852451 [Vitis vinifera]
          Length = 261

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
 Frame = -3

Query: 250 MEFVFVLSGWEGSAHDGRVLRDAISRPNGLKVPQDCYYLVDVGYTNCEGFLAPYRGHRYH 71
           M F++V  GWEGS  D RVLRDA+S+ NGL VP   YYLVDVGYTN +GFLAPYRG RYH
Sbjct: 145 MRFIYVFPGWEGSTSDSRVLRDAVSKRNGLTVPHGKYYLVDVGYTNGKGFLAPYRGQRYH 204

Query: 70  LKEWGD-RQPVSAEEYFNMKHSKA 2
           L +W +   P + EE+FNMKHS A
Sbjct: 205 LIDWREGHMPTTHEEFFNMKHSAA 228


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