BLASTX nr result

ID: Bupleurum21_contig00014032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014032
         (1200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37616.1| unknown [Lotus japonicus]                              336   8e-90
ref|XP_004135632.1| PREDICTED: uncharacterized protein LOC101211...   335   1e-89
ref|XP_004157259.1| PREDICTED: probable 39S ribosomal protein L4...   334   2e-89
ref|XP_003556498.1| PREDICTED: probable 39S ribosomal protein L4...   331   3e-88
ref|XP_002319031.1| predicted protein [Populus trichocarpa] gi|2...   322   1e-85

>gb|AFK37616.1| unknown [Lotus japonicus]
          Length = 305

 Score =  336 bits (861), Expect = 8e-90
 Identities = 167/277 (60%), Positives = 201/277 (72%), Gaps = 4/277 (1%)
 Frame = +1

Query: 49  SNTLFGGSTYYHNVAGMFGGQKLTSIH----KSYRGRLWTYGDSNVFCSSMVAEQPIFWS 216
           S+ L G    Y N           S H    K + G     G +    S+M AE  IF +
Sbjct: 24  SSYLLGSCRSYSNALSNGSEGNFKSFHSHLFKCHDGFPLAGGKTLTLRSTMAAELSIFMN 83

Query: 217 HQRMATTQAKVPAQARQKGTQLSLLSPGFVYEPYAPREPMAFWRRWFTRSGWRRTKDDII 396
            +RM +TQ K  + +R  GTQ+S+ SPGF+YEPY PRE + FW+RWFTRSGW+RTK D+I
Sbjct: 84  DKRMLSTQLKGSSLSRAVGTQISVSSPGFIYEPYEPREKIPFWQRWFTRSGWKRTKQDVI 143

Query: 397 LELKSAYAISKLRKKGYSKKNFYMEAFQIYKEINTYIATGDKASLRKAVTERLYSTLKNE 576
           LELKSAYAI KLRK GYSK  FY EAF++YKEIN  IA GDK SLRKAVTE++YS LKNE
Sbjct: 144 LELKSAYAIQKLRKSGYSKSRFYNEAFKMYKEINALIANGDKKSLRKAVTEKMYSALKNE 203

Query: 577 IKQRQTMWSSIHLELIEPAVKIRTLRARMIAVDKNDLSKFFMQLTLEFLTKQKFEAYDSS 756
           IKQR+T W+ ++ ELIEP +++RTLRAR+I VD  DL+K F+QLTLE   KQKFEAYDS 
Sbjct: 204 IKQRETTWNKVYWELIEPVIRVRTLRARLIGVDPKDLNKVFVQLTLEITAKQKFEAYDSK 263

Query: 757 GAVVAGDKDKEVLVRDIWVFEKSFFHPNSYWRLCGRI 867
           G+VVAGDK+KEVLVRDIWVFEKS FHP +YWRLCGR+
Sbjct: 264 GSVVAGDKNKEVLVRDIWVFEKSMFHPGAYWRLCGRL 300


>ref|XP_004135632.1| PREDICTED: uncharacterized protein LOC101211143 [Cucumis sativus]
          Length = 302

 Score =  335 bits (859), Expect = 1e-89
 Identities = 169/260 (65%), Positives = 203/260 (78%), Gaps = 5/260 (1%)
 Frame = +1

Query: 103 GGQKLTS-IHKSYRGRLWTYGDSNVFCSSMVAEQPIFWSHQ---RMATTQAKVPAQARQK 270
           G QK +S +  S+       G   + CS++ AE  +F SH    R+ TTQ K P QARQK
Sbjct: 42  GIQKTSSFLSNSHSAFSLARGHKMIICSAVAAEFSVF-SHGIGIRLVTTQVKAPPQARQK 100

Query: 271 -GTQLSLLSPGFVYEPYAPREPMAFWRRWFTRSGWRRTKDDIILELKSAYAISKLRKKGY 447
            G ++++LSPGF+YEPY+PR+ + FW+RWFTRSGW+RTKDDIILELKSAYAI+KLRKKGY
Sbjct: 101 IGLKVTMLSPGFIYEPYSPRQQLPFWQRWFTRSGWKRTKDDIILELKSAYAIAKLRKKGY 160

Query: 448 SKKNFYMEAFQIYKEINTYIATGDKASLRKAVTERLYSTLKNEIKQRQTMWSSIHLELIE 627
           SKK FY EA  +Y+EINT IA GDK SLRKAVTE +YS LKNEIK R++ WS ++ E+I 
Sbjct: 161 SKKKFYEEAANLYREINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWSKVYWEMIV 220

Query: 628 PAVKIRTLRARMIAVDKNDLSKFFMQLTLEFLTKQKFEAYDSSGAVVAGDKDKEVLVRDI 807
           P VKIRTLRAR+I VD++DL K F+QLTLE L KQKFEAY+S GAVVAGDK KEVLVRDI
Sbjct: 221 PVVKIRTLRARLIGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDI 280

Query: 808 WVFEKSFFHPNSYWRLCGRI 867
           WVFEKS FH  ++WRLCGRI
Sbjct: 281 WVFEKSLFHEGAFWRLCGRI 300


>ref|XP_004157259.1| PREDICTED: probable 39S ribosomal protein L45, mitochondrial-like
           [Cucumis sativus]
          Length = 302

 Score =  334 bits (857), Expect = 2e-89
 Identities = 169/260 (65%), Positives = 203/260 (78%), Gaps = 5/260 (1%)
 Frame = +1

Query: 103 GGQKLTS-IHKSYRGRLWTYGDSNVFCSSMVAEQPIFWSHQ---RMATTQAKVPAQARQK 270
           G QK +S +  S+       G   + CS++ AE  +F SH    R+ TTQ K P QARQK
Sbjct: 42  GIQKTSSFLSNSHSAFSLARGHKMIICSAVAAEFLVF-SHGIGIRLVTTQVKAPPQARQK 100

Query: 271 -GTQLSLLSPGFVYEPYAPREPMAFWRRWFTRSGWRRTKDDIILELKSAYAISKLRKKGY 447
            G ++++LSPGF+YEPY+PR+ + FW+RWFTRSGW+RTKDDIILELKSAYAI+KLRKKGY
Sbjct: 101 IGLKVTMLSPGFIYEPYSPRQQLPFWQRWFTRSGWKRTKDDIILELKSAYAIAKLRKKGY 160

Query: 448 SKKNFYMEAFQIYKEINTYIATGDKASLRKAVTERLYSTLKNEIKQRQTMWSSIHLELIE 627
           SKK FY EA  +Y+EINT IA GDK SLRKAVTE +YS LKNEIK R++ WS ++ E+I 
Sbjct: 161 SKKKFYEEAANLYREINTLIANGDKTSLRKAVTENMYSALKNEIKLRESKWSKVYWEMIV 220

Query: 628 PAVKIRTLRARMIAVDKNDLSKFFMQLTLEFLTKQKFEAYDSSGAVVAGDKDKEVLVRDI 807
           P VKIRTLRAR+I VD++DL K F+QLTLE L KQKFEAY+S GAVVAGDK KEVLVRDI
Sbjct: 221 PVVKIRTLRARLIGVDRSDLEKVFVQLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDI 280

Query: 808 WVFEKSFFHPNSYWRLCGRI 867
           WVFEKS FH  ++WRLCGRI
Sbjct: 281 WVFEKSLFHEGAFWRLCGRI 300


>ref|XP_003556498.1| PREDICTED: probable 39S ribosomal protein L45, mitochondrial-like
           [Glycine max]
          Length = 309

 Score =  331 bits (848), Expect = 3e-88
 Identities = 161/229 (70%), Positives = 188/229 (82%)
 Frame = +1

Query: 181 SSMVAEQPIFWSHQRMATTQAKVPAQARQKGTQLSLLSPGFVYEPYAPREPMAFWRRWFT 360
           S+M AE  IF +++RM +TQ K  AQARQ G Q+SL SPGF+YEPY PR+ + FW+RWFT
Sbjct: 72  STMAAELSIFMNNRRMLSTQVKASAQARQVGQQISLSSPGFIYEPYEPRDKIPFWKRWFT 131

Query: 361 RSGWRRTKDDIILELKSAYAISKLRKKGYSKKNFYMEAFQIYKEINTYIATGDKASLRKA 540
           RSG RRTK+DIILELKSAYAI+KLRK GYSK  FY EA  +YKEINT IA GDK +LRKA
Sbjct: 132 RSGLRRTKNDIILELKSAYAIAKLRKTGYSKNQFYNEAANMYKEINTLIAKGDKRTLRKA 191

Query: 541 VTERLYSTLKNEIKQRQTMWSSIHLELIEPAVKIRTLRARMIAVDKNDLSKFFMQLTLEF 720
           VTE ++S LKNEIKQR+T WS ++ E++EP VKIRTLRAR+I VD+ DL+K F+QLTLE 
Sbjct: 192 VTENMFSALKNEIKQRETAWSRVYWEMVEPVVKIRTLRARLIGVDRKDLNKTFIQLTLEI 251

Query: 721 LTKQKFEAYDSSGAVVAGDKDKEVLVRDIWVFEKSFFHPNSYWRLCGRI 867
           L KQKFEAYDS G+VVAGDK KEVLVRDIWVFEKS FH  + WRLCGRI
Sbjct: 252 LAKQKFEAYDSKGSVVAGDKSKEVLVRDIWVFEKSMFHAGATWRLCGRI 300


>ref|XP_002319031.1| predicted protein [Populus trichocarpa] gi|222857407|gb|EEE94954.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  322 bits (825), Expect = 1e-85
 Identities = 159/231 (68%), Positives = 192/231 (83%), Gaps = 6/231 (2%)
 Frame = +1

Query: 196 EQPIFWSHQRMATTQAKVPAQARQKGT-QLSLLSPGFVYEPYAPREPMAFWRRWFTRSGW 372
           E  IF + +R ATT+   P QARQ G+ ++S+ SPGF+YEPYAPR+ ++FWRRWFT+SGW
Sbjct: 2   ELSIFLNDKRSATTKVNAPPQARQMGSLKVSISSPGFIYEPYAPRDTISFWRRWFTKSGW 61

Query: 373 RRTKDDIILELKSAYAISKLRKKGYSKKNFYMEAFQIYKEINTYIATGDKASLRKAVTER 552
           RRTK+DIILELK+AYAI KLRK GYSK  FY+EA ++YKEINT +A GDK +LRKAVTE+
Sbjct: 62  RRTKNDIILELKNAYAIVKLRKTGYSKHKFYVEAIKLYKEINTLLANGDKTALRKAVTEK 121

Query: 553 LYSTLKNEIKQRQTMW--SSIHLELIEPAVKIRTLRARM---IAVDKNDLSKFFMQLTLE 717
           +YS LKNEIKQRQ+ W  S ++ E+IEPAV IRTLRAR+   I VDK+DL+K F+QLTLE
Sbjct: 122 MYSELKNEIKQRQSAWNMSKLYWEMIEPAVLIRTLRARLATEIGVDKSDLNKVFIQLTLE 181

Query: 718 FLTKQKFEAYDSSGAVVAGDKDKEVLVRDIWVFEKSFFHPNSYWRLCGRIK 870
             TKQKFEAYDS GA VAGDK+KE+LVR+IWVFEKS FHP +YWRLCGRIK
Sbjct: 182 IKTKQKFEAYDSKGARVAGDKNKEILVREIWVFEKSLFHPGAYWRLCGRIK 232


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