BLASTX nr result

ID: Bupleurum21_contig00014027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00014027
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311739.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002515020.1| protein with unknown function [Ricinus commu...    63   2e-08
ref|XP_002314568.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002267668.1| PREDICTED: probable LRR receptor-like serine...    62   6e-08
emb|CBI27523.3| unnamed protein product [Vitis vinifera]               57   2e-06

>ref|XP_002311739.1| predicted protein [Populus trichocarpa] gi|222851559|gb|EEE89106.1|
           predicted protein [Populus trichocarpa]
          Length = 932

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   VDNNSLTGDIPSALLNGKVILKYEGNPGLRDRTKHKRNHRMIVGVSIGXXXXXXXXXXXX 182
           + NNS +G+IPS  L GKVI  YE NPGL    + K + ++IVG+SIG            
Sbjct: 491 IQNNSFSGEIPSEFLTGKVIFNYEHNPGLHKEARKKMHLKLIVGISIGILAGLLVVVIGS 550

Query: 183 XXXXXRHRQKRSHQKNG-KSNSLRTST 260
                  ++K SH+K+  + NSLR ST
Sbjct: 551 LLFLRNLQRKTSHKKSEVQGNSLRAST 577


>ref|XP_002515020.1| protein with unknown function [Ricinus communis]
           gi|223546071|gb|EEF47574.1| protein with unknown
           function [Ricinus communis]
          Length = 911

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   VDNNSLTGDIPSALLNGKVILKYEGNPGLRDRTKHKRNHRMIVGVSIGXXXXXXXXXXXX 182
           + NNS  G +P+ALL GKV L YE NPGL      K + ++ +G+SIG            
Sbjct: 469 IQNNSFVGKVPAALLTGKVNLNYEDNPGLHKEVAKKMHFKLTLGISIGVLAILLVLLLGT 528

Query: 183 XXXXXRHRQKRSHQK-NGKSNSLRTST 260
                R ++K SHQK +   NS+R ST
Sbjct: 529 LIYLRRLQRKTSHQKTDNPGNSMRAST 555


>ref|XP_002314568.1| predicted protein [Populus trichocarpa] gi|222863608|gb|EEF00739.1|
           predicted protein [Populus trichocarpa]
          Length = 934

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = +3

Query: 3   VDNNSLTGDIPSALLNGKVILKYEGNPGLRDRTKHKRNHRMIVGVSIGXXXXXXXXXXXX 182
           + NN  +G+IPS LL GKVI+ YE NPGL      K++ ++I+GVSIG            
Sbjct: 491 IQNNYFSGEIPSGLLTGKVIINYEHNPGLHKEAGKKKHSKLILGVSIGILAALLVVLIGS 550

Query: 183 XXXXXRHRQKRSHQKNG-KSNSLRTS 257
                  ++K SHQK   + +SLR S
Sbjct: 551 LLFLRNLQRKTSHQKTAVQGSSLRVS 576


>ref|XP_002267668.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g67720-like [Vitis vinifera]
          Length = 930

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/87 (42%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
 Frame = +3

Query: 3   VDNNSLTGDIPSALLNGKVILKYEGNPGLRDRTKHKRNHRMIVGVSIGXXXXXXXXXXXX 182
           V NN L+G+IP ALL GKVI  YEGN  L  +  HK + ++I+G S+G            
Sbjct: 490 VQNNLLSGEIPPALLTGKVIFNYEGNSKLH-KEAHKTHFKLILGASVGLLALLLVLCIGS 548

Query: 183 XXXXXRHRQKRSHQK-NGKSNSLRTST 260
                  R+K S  K N K +SLRTST
Sbjct: 549 LFLLCNTRRKESQSKSNDKGSSLRTST 575


>emb|CBI27523.3| unnamed protein product [Vitis vinifera]
          Length = 926

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/86 (40%), Positives = 45/86 (52%)
 Frame = +3

Query: 3   VDNNSLTGDIPSALLNGKVILKYEGNPGLRDRTKHKRNHRMIVGVSIGXXXXXXXXXXXX 182
           V NN L+G+IP ALL GKVI  YEGN  L  +  HK + ++I+G S+G            
Sbjct: 490 VQNNLLSGEIPPALLTGKVIFNYEGNSKLH-KEAHKTHFKLILGASVGLLALLLVLCIGS 548

Query: 183 XXXXXRHRQKRSHQKNGKSNSLRTST 260
                  R+K S  K    +SLRTST
Sbjct: 549 LFLLCNTRRKESQSKR---SSLRTST 571


Top