BLASTX nr result

ID: Bupleurum21_contig00013697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013697
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]   104   7e-21
emb|CAN60706.1| hypothetical protein VITISV_043852 [Vitis vinifera]   102   3e-20
emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]   102   4e-20
emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera]    99   4e-19
gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopers...    97   1e-18

>emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]
          Length = 1501

 Score =  104 bits (260), Expect = 7e-21
 Identities = 49/91 (53%), Positives = 63/91 (69%)
 Frame = -2

Query: 348  SGFNSIDARTNQCEIECQRIIHMQNIANQMPDAFSDSRHIINSHIPAVNAPARVRITVDK 169
            S    +D RTNQCE+E QRIIH+QN+ANQ+PDAF D++ +  SHIPA N PAR+ + V +
Sbjct: 776  SAMTHLDPRTNQCELEVQRIIHLQNLANQLPDAFIDTKKVTKSHIPAANTPARIDVPVGQ 835

Query: 168  SIPEESVKGSGPRQKRGRPVGAKDTVPRKRK 76
               E  +     R KRGRPVG+KD  PRKR+
Sbjct: 836  LTNESKI-----RLKRGRPVGSKDVTPRKRR 861


>emb|CAN60706.1| hypothetical protein VITISV_043852 [Vitis vinifera]
          Length = 805

 Score =  102 bits (254), Expect = 3e-20
 Identities = 54/117 (46%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
 Frame = -2

Query: 348 SGFNSIDARTNQCEIECQRIIHMQNIANQMPDAFSDSRHIINSHIPAVNAPARVRITVDK 169
           S    +D RTNQCE+E QRIIH QN+ANQ+PDAF D++ +  SHIP  N PAR+ + V +
Sbjct: 171 STMTHLDPRTNQCELEVQRIIHFQNLANQLPDAFIDTKKVTKSHIPTANTPARIDVPVGQ 230

Query: 168 SIPEESVKGSGPRQKRGRPVGAKDTVPRKRKL---IGLAPEVAIDPENTPEVVLPPE 7
              E  +     R KRGRPVG+KD  PRKR+    +G   E  I  +   EV +  E
Sbjct: 231 LTNESKI-----RLKRGRPVGSKDVTPRKRRTQEKLGTLEEAQIMQKAPEEVHIEQE 282


>emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]
          Length = 1496

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/91 (52%), Positives = 62/91 (68%)
 Frame = -2

Query: 348  SGFNSIDARTNQCEIECQRIIHMQNIANQMPDAFSDSRHIINSHIPAVNAPARVRITVDK 169
            S    +D RTNQCE+E QRIIH+QN+ANQ+PDAF D++ +  SHIP  N PAR+ + V +
Sbjct: 778  STMTHLDPRTNQCELEVQRIIHLQNLANQLPDAFIDTKKVTKSHIPXANTPARIDVPVGQ 837

Query: 168  SIPEESVKGSGPRQKRGRPVGAKDTVPRKRK 76
               E  +     R KRGRPVG+KD  PRKR+
Sbjct: 838  LTNESKI-----RLKRGRPVGSKDVTPRKRR 863


>emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera]
          Length = 1360

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/91 (51%), Positives = 60/91 (65%)
 Frame = -2

Query: 348 SGFNSIDARTNQCEIECQRIIHMQNIANQMPDAFSDSRHIINSHIPAVNAPARVRITVDK 169
           S    +D RTNQCE+E QRIIH+QN+ANQ+PDAF D++ +  SHIPA N PA + +    
Sbjct: 642 STMTHLDPRTNQCELEVQRIIHLQNLANQLPDAFIDTKKVTKSHIPAANTPAXIDVPXGX 701

Query: 168 SIPEESVKGSGPRQKRGRPVGAKDTVPRKRK 76
              E  +     R KRGRPVG+KD  PRKR+
Sbjct: 702 LTNESKI-----RLKRGRPVGSKDVTPRKRR 727


>gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopersicum]
          Length = 779

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 50/91 (54%), Positives = 62/91 (68%)
 Frame = -2

Query: 348 SGFNSIDARTNQCEIECQRIIHMQNIANQMPDAFSDSRHIINSHIPAVNAPARVRITVDK 169
           S  + +D RTNQCE E QRII++QNIANQ+PDAF++   I  S+IPAVNAP RV I   +
Sbjct: 206 SSLSHLDPRTNQCEQEVQRIIYLQNIANQLPDAFTNLPRITKSYIPAVNAPVRVDIPTGQ 265

Query: 168 SIPEESVKGSGPRQKRGRPVGAKDTVPRKRK 76
            +       S P  KRGRP+G+KD  PRKRK
Sbjct: 266 IV---KANESRPHLKRGRPIGSKDKNPRKRK 293


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