BLASTX nr result

ID: Bupleurum21_contig00013497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013497
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18955.3| unnamed protein product [Vitis vinifera]              111   5e-23
ref|XP_003527955.1| PREDICTED: uncharacterized protein LOC100795...   109   2e-22
ref|XP_002302212.1| predicted protein [Populus trichocarpa] gi|2...   108   4e-22
ref|XP_002306661.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21
ref|XP_002520293.1| DNA binding protein, putative [Ricinus commu...   100   9e-20

>emb|CBI18955.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/111 (48%), Positives = 76/111 (68%)
 Frame = +2

Query: 5   SASKYHVDVISNGSRNKSSLSTNTAMCKHALLNVLKSAKFTELCDLLLENFQGLDLRSVL 184
           SAS+ HV V SNGS ++S   T T +C+ +   ++ S KF  LC L+LENFQG+ + +  
Sbjct: 375 SASRSHVGVTSNGSLSESDHHTITELCRRSFFKLIMSEKFASLCKLMLENFQGIKVDNFF 434

Query: 185 DINTILYKVKKGAYESSPMLFNRDIQQVWSKLQTVGNEMVALANSLSEKSR 337
           D + I  ++ +GAYE SPMLF+ D+QQVW KLQ +G E+V+L  +LSE SR
Sbjct: 435 DFSLIHSRMIEGAYERSPMLFSSDVQQVWKKLQRIGTEIVSLGTTLSEMSR 485


>ref|XP_003527955.1| PREDICTED: uncharacterized protein LOC100795906 [Glycine max]
          Length = 646

 Score =  109 bits (273), Expect = 2e-22
 Identities = 58/106 (54%), Positives = 69/106 (65%)
 Frame = +2

Query: 20  HVDVISNGSRNKSSLSTNTAMCKHALLNVLKSAKFTELCDLLLENFQGLDLRSVLDINTI 199
           H DV+ NG  ++S     T MC+  L NVL S KF+ LC  LLENFQG+   SVLD   +
Sbjct: 217 HADVMCNGGSSESPDHGVTEMCQRVLCNVLTSEKFSSLCKALLENFQGMKPESVLDFTVM 276

Query: 200 LYKVKKGAYESSPMLFNRDIQQVWSKLQTVGNEMVALANSLSEKSR 337
             ++K+ AYE SP LF  DIQQVW KLQ  GNE+VALA SLS  SR
Sbjct: 277 NSRMKEQAYEQSPTLFLSDIQQVWRKLQDAGNEIVALAKSLSNMSR 322


>ref|XP_002302212.1| predicted protein [Populus trichocarpa] gi|222843938|gb|EEE81485.1|
           predicted protein [Populus trichocarpa]
          Length = 604

 Score =  108 bits (270), Expect = 4e-22
 Identities = 55/111 (49%), Positives = 75/111 (67%)
 Frame = +2

Query: 5   SASKYHVDVISNGSRNKSSLSTNTAMCKHALLNVLKSAKFTELCDLLLENFQGLDLRSVL 184
           S +K HV VISNG+  +S   + T +C+HA LN L S KFT LC LL ENF+G+   S+L
Sbjct: 170 STAKGHVGVISNGTLEESQHHSVTDLCQHAFLNTLLSEKFTSLCKLLFENFKGMTTDSIL 229

Query: 185 DINTILYKVKKGAYESSPMLFNRDIQQVWSKLQTVGNEMVALANSLSEKSR 337
            +N I  ++K+GAY+  P+LF  DI+Q W KLQ  G E+++LA SLS  S+
Sbjct: 230 SLNFIDKRMKEGAYDRLPVLFCEDIEQFWRKLQGFGAELISLAKSLSNISK 280


>ref|XP_002306661.1| predicted protein [Populus trichocarpa] gi|222856110|gb|EEE93657.1|
           predicted protein [Populus trichocarpa]
          Length = 524

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/111 (46%), Positives = 76/111 (68%)
 Frame = +2

Query: 5   SASKYHVDVISNGSRNKSSLSTNTAMCKHALLNVLKSAKFTELCDLLLENFQGLDLRSVL 184
           S +K H  V+SNG+ ++S   +   +C+HA L++L S KFT LC LL ENFQG+   S+L
Sbjct: 100 STAKGHAGVLSNGALDESRHHSVPELCQHAFLSILLSEKFTSLCKLLFENFQGMKTGSIL 159

Query: 185 DINTILYKVKKGAYESSPMLFNRDIQQVWSKLQTVGNEMVALANSLSEKSR 337
            ++ I  ++K GAY+ SPMLF  DI+Q W KLQ  G E+++L+ SLS+ S+
Sbjct: 160 SLSFIDRRMKDGAYDHSPMLFCEDIEQFWRKLQGFGAELISLSKSLSDISK 210


>ref|XP_002520293.1| DNA binding protein, putative [Ricinus communis]
           gi|223540512|gb|EEF42079.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 510

 Score =  100 bits (250), Expect = 9e-20
 Identities = 53/109 (48%), Positives = 73/109 (66%)
 Frame = +2

Query: 8   ASKYHVDVISNGSRNKSSLSTNTAMCKHALLNVLKSAKFTELCDLLLENFQGLDLRSVLD 187
           A++ ++DV  N S + S  S  T MC+HA  N++ S KF+ LC LL ENFQ +   + L 
Sbjct: 103 AARGNIDVTLNKSLDDSQRSV-TEMCQHAFANIIISEKFSLLCKLLSENFQEMKPDNFLS 161

Query: 188 INTILYKVKKGAYESSPMLFNRDIQQVWSKLQTVGNEMVALANSLSEKS 334
           ++ I  K+K G YE SPMLF  DIQ+VW KLQ +GNE+++LA SLS+ S
Sbjct: 162 LSRIKIKMKDGVYERSPMLFYEDIQRVWKKLQGIGNELISLAKSLSDVS 210


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