BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013494
         (1173 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265627.1| PREDICTED: zinc finger CCHC-type and RNA-bin...   258   3e-66
ref|NP_187651.1| small nuclear ribonucleoprotein 31 kDa protein ...   241   2e-61
ref|XP_002882666.1| hypothetical protein ARALYDRAFT_897216 [Arab...   240   4e-61
dbj|BAF00594.1| hypothetical protein [Arabidopsis thaliana]           237   5e-60
ref|XP_004142290.1| PREDICTED: zinc finger CCHC-type and RNA-bin...   232   2e-58

>ref|XP_002265627.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
           protein 1 [Vitis vinifera] gi|147789032|emb|CAN75783.1|
           hypothetical protein VITISV_022491 [Vitis vinifera]
          Length = 250

 Score =  258 bits (658), Expect = 3e-66
 Identities = 138/210 (65%), Positives = 151/210 (71%), Gaps = 1/210 (0%)
 Frame = +1

Query: 79  LAPSKSTVYISNLDYTLTNSDLFTIFSTFGKVAKVTILKDRQSRQSRGVAFVLFVSRHDA 258
           LAPSKSTVY+SNLDYTLTNSDLFTIFSTFGKVAKVTILKDR +R SRGVAFVLFVSR +A
Sbjct: 46  LAPSKSTVYVSNLDYTLTNSDLFTIFSTFGKVAKVTILKDRHTRHSRGVAFVLFVSRDEA 105

Query: 259 IKAVKGMNGKILNKRTLTASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNQ 438
           I A + MNGK+LNKRTLTASIAADNGRA EFIR++VYKDKSRCYECGE GHLSYECPRNQ
Sbjct: 106 IAAAREMNGKVLNKRTLTASIAADNGRAAEFIRRRVYKDKSRCYECGEGGHLSYECPRNQ 165

Query: 439 FGPRERPQPKKVRRFDGRREAVSAAVXXXXXXXXXXXXXXXXXXXXNWASVVDADANXXX 618
            GPRERP PK+ RR  G  EA                         NWASVVD  A+   
Sbjct: 166 LGPRERPVPKRSRRGQGGSEA-----RQNGDHDNGGSDGGEAFEDDNWASVVDTGADQRL 220

Query: 619 XXXXXXXXXNAK-KEKKKVSYFSDESGDED 705
                      K K++KK SYFSDES +E+
Sbjct: 221 LKGSEGLEMRKKGKKEKKASYFSDESDEEE 250


>ref|NP_187651.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
           thaliana] gi|12322795|gb|AAG51392.1|AC011560_24
           hypothetical protein; 114721-113936 [Arabidopsis
           thaliana] gi|54261729|gb|AAV31168.1| At3g10400
           [Arabidopsis thaliana] gi|61656137|gb|AAX49371.1|
           At3g10400 [Arabidopsis thaliana]
           gi|332641379|gb|AEE74900.1| small nuclear
           ribonucleoprotein 31 kDa protein [Arabidopsis thaliana]
          Length = 261

 Score =  241 bits (616), Expect = 2e-61
 Identities = 129/213 (60%), Positives = 150/213 (70%), Gaps = 4/213 (1%)
 Frame = +1

Query: 79  LAPSKSTVYISNLDYTLTNSDLFTIFSTFGKVAKVTILKDRQSRQSRGVAFVLFVSRHDA 258
           LAPSKST+Y+SNLD++LTNSD+ T+FSTFGKVA+VT+LKDR +RQSRGVAFVL+VSR DA
Sbjct: 52  LAPSKSTLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDA 111

Query: 259 IKAVKGMNGKILNKRTLTASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNQ 438
            KA + M+ KILN R LT SIAADNGRA+EFI+K+VYKDKSRCYECG+EGHLSYECP+NQ
Sbjct: 112 AKAARSMDAKILNGRKLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPKNQ 171

Query: 439 FGPRERPQPKKVRRFDGRR--EAVSAAVXXXXXXXXXXXXXXXXXXXXNWASVVDADA-- 606
            GPRERP P K R   GRR  E   A                      NWASVVD +A  
Sbjct: 172 LGPRERPPPPKKR---GRRKEEEGEAEEISWSAAAPSLAVAEEEFEEENWASVVDNEAGE 228

Query: 607 NXXXXXXXXXXXXNAKKEKKKVSYFSDESGDED 705
                          K+++KKVSYFSDES DED
Sbjct: 229 RLRKREAEEEEERRMKRKEKKVSYFSDESDDED 261


>ref|XP_002882666.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
           lyrata] gi|297328506|gb|EFH58925.1| hypothetical protein
           ARALYDRAFT_897216 [Arabidopsis lyrata subsp. lyrata]
          Length = 257

 Score =  240 bits (613), Expect = 4e-61
 Identities = 127/211 (60%), Positives = 149/211 (70%), Gaps = 2/211 (0%)
 Frame = +1

Query: 79  LAPSKSTVYISNLDYTLTNSDLFTIFSTFGKVAKVTILKDRQSRQSRGVAFVLFVSRHDA 258
           LAPSKST+Y+SNLD++LTNSD+ T+FSTFGKVA+VT+LKDR +RQSRGVAFVL+VSR DA
Sbjct: 52  LAPSKSTLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDA 111

Query: 259 IKAVKGMNGKILNKRTLTASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNQ 438
            KA + M+ KILN R LT SIAADNGRA+EFI+K+VYKDKSRCYECG+EGHLSYECP+NQ
Sbjct: 112 AKAARSMDAKILNGRKLTVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPKNQ 171

Query: 439 FGPRERPQPKKVRRFDGRREAVSAAVXXXXXXXXXXXXXXXXXXXXNWASVVDADANXXX 618
            GPRERP P K R   GRR+                          NWASVVD +A    
Sbjct: 172 LGPRERPPPPKKR---GRRKEDEGEA--EEIRDWSAAPSLEGFEEENWASVVDNEAGERL 226

Query: 619 XXXXXXXXXNAKKEK--KKVSYFSDESGDED 705
                      +K++  KKVSYFSDES DED
Sbjct: 227 RMREAEEEEERRKKRKEKKVSYFSDESDDED 257


>dbj|BAF00594.1| hypothetical protein [Arabidopsis thaliana]
          Length = 261

 Score =  237 bits (604), Expect = 5e-60
 Identities = 127/213 (59%), Positives = 148/213 (69%), Gaps = 4/213 (1%)
 Frame = +1

Query: 79  LAPSKSTVYISNLDYTLTNSDLFTIFSTFGKVAKVTILKDRQSRQSRGVAFVLFVSRHDA 258
           LAPSKST+Y+SNLD++LTNSD+ T+FSTFGKVA+VT+LKDR +RQSRGVAFVL+V R DA
Sbjct: 52  LAPSKSTLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVPREDA 111

Query: 259 IKAVKGMNGKILNKRTLTASIAADNGRATEFIRKKVYKDKSRCYECGEEGHLSYECPRNQ 438
            KA + M+ KILN R LT SIAADNG A+EFI+K+VYKDKSRCYECG+EGHLSYECP+NQ
Sbjct: 112 AKAARSMDAKILNGRKLTVSIAADNGLASEFIKKRVYKDKSRCYECGDEGHLSYECPKNQ 171

Query: 439 FGPRERPQPKKVRRFDGRR--EAVSAAVXXXXXXXXXXXXXXXXXXXXNWASVVDADA-- 606
            GPRERP P K R   GRR  E   A                      NWASVVD +A  
Sbjct: 172 LGPRERPPPPKKR---GRRKEEEGEAEEISWSAAAPSLAVAEEEFEEENWASVVDNEAGE 228

Query: 607 NXXXXXXXXXXXXNAKKEKKKVSYFSDESGDED 705
                          K+++KKVSYFSDES DED
Sbjct: 229 RLRKREAEEEEERRMKRKEKKVSYFSDESDDED 261


>ref|XP_004142290.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
           protein 1-like [Cucumis sativus]
          Length = 261

 Score =  232 bits (591), Expect = 2e-58
 Identities = 123/212 (58%), Positives = 147/212 (69%), Gaps = 3/212 (1%)
 Frame = +1

Query: 79  LAPSKSTVYISNLDYTLTNSDLFTIFSTFGKVAKVTILKDRQSRQSRGVAFVLFVSRHDA 258
           L PSKST+Y+SN DY+LTNSDL T+FS FGK+A+VT+LKDRQ+R+SRGVAFV F+S+ DA
Sbjct: 64  LVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDA 123

Query: 259 IKAVKGMNGKILNKRTLTASIAADNGRATEFIRKKVYKDKSRCYECGE-EGHLSYECPRN 435
           +KA K M+GKILN R L A+IA DNGRA EFIRK+VYKDKSRCYECG  +GHLSYECP+N
Sbjct: 124 VKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDGHLSYECPKN 183

Query: 436 QFGPRERPQPKKVRR--FDGRREAVSAAVXXXXXXXXXXXXXXXXXXXXNWASVVDADAN 609
           Q GPRERP+PK+VRR     R E                          NWASVVD DA+
Sbjct: 184 QLGPRERPEPKRVRRGGVGARHEE------------DWGSDVGEGFEDDNWASVVDGDAD 231

Query: 610 XXXXXXXXXXXXNAKKEKKKVSYFSDESGDED 705
                         KK++KK SYFSDES ++D
Sbjct: 232 QRLLTGGENIVE--KKKEKKASYFSDESDEDD 261