BLASTX nr result

ID: Bupleurum21_contig00013491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013491
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20820.3| unnamed protein product [Vitis vinifera]              166   1e-39
ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor ...   153   2e-35
ref|XP_002528006.1| conserved hypothetical protein [Ricinus comm...   146   2e-33
ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor ...   140   1e-31
ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor ...   138   5e-31

>emb|CBI20820.3| unnamed protein product [Vitis vinifera]
          Length = 1760

 Score =  166 bits (421), Expect = 1e-39
 Identities = 89/142 (62%), Positives = 105/142 (73%)
 Frame = +2

Query: 2   TAALEIFKETNDEGXXXXXXXXXXSTVIDAGNAVEVSRSLHGFDAIAMNSQVAEPESNDE 181
           +AALE FK TNDE           STVIDA NA+EVSRS    +A  MNS+  E E N+E
Sbjct: 423 SAALEEFKTTNDEEAAILAASKAASTVIDAANAIEVSRSSSNMNADPMNSRGTETEINEE 482

Query: 182 VKEFFIPDYNILAHLREWFCIQCLQILGEYVEVLGPVLNEKGVDVCIALLQRGSMVQDEP 361
           V+EFFI D + LA LRE +CIQCL+ILGEYVEVLGPVL+EKGVDVC+ALLQR S +++  
Sbjct: 483 VEEFFIMDADSLAQLREKYCIQCLEILGEYVEVLGPVLHEKGVDVCLALLQRSSKLKEAS 542

Query: 362 KIVLLLSDVLKLISVLAAHRKF 427
           K+ +LL DVLKLI  LAAHRKF
Sbjct: 543 KLAMLLPDVLKLICALAAHRKF 564


>ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Vitis
           vinifera]
          Length = 2024

 Score =  153 bits (386), Expect = 2e-35
 Identities = 84/142 (59%), Positives = 101/142 (71%)
 Frame = +2

Query: 2   TAALEIFKETNDEGXXXXXXXXXXSTVIDAGNAVEVSRSLHGFDAIAMNSQVAEPESNDE 181
           +AALE FK TNDE           STVIDA NA+EVSR       + +  +  E E N+E
Sbjct: 586 SAALEEFKTTNDEEAAILAASKAASTVIDAANAIEVSR-------LVILYRCTETEINEE 638

Query: 182 VKEFFIPDYNILAHLREWFCIQCLQILGEYVEVLGPVLNEKGVDVCIALLQRGSMVQDEP 361
           V+EFFI D + LA LRE +CIQCL+ILGEYVEVLGPVL+EKGVDVC+ALLQR S +++  
Sbjct: 639 VEEFFIMDADSLAQLREKYCIQCLEILGEYVEVLGPVLHEKGVDVCLALLQRSSKLKEAS 698

Query: 362 KIVLLLSDVLKLISVLAAHRKF 427
           K+ +LL DVLKLI  LAAHRKF
Sbjct: 699 KLAMLLPDVLKLICALAAHRKF 720


>ref|XP_002528006.1| conserved hypothetical protein [Ricinus communis]
           gi|223532632|gb|EEF34418.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1871

 Score =  146 bits (368), Expect = 2e-33
 Identities = 80/142 (56%), Positives = 98/142 (69%)
 Frame = +2

Query: 2   TAALEIFKETNDEGXXXXXXXXXXSTVIDAGNAVEVSRSLHGFDAIAMNSQVAEPESNDE 181
           +AALE FK +N E           STVIDA NAVEVSR+    D  ++ S   E E+ ++
Sbjct: 472 SAALEEFKSSNSEEAAVLAAARAASTVIDAANAVEVSRNRCSNDD-SVTSGGTETEATED 530

Query: 182 VKEFFIPDYNILAHLREWFCIQCLQILGEYVEVLGPVLNEKGVDVCIALLQRGSMVQDEP 361
            +E+F+PD   LA +RE FCIQCL+ILGEYVEVLGPVL+EKGVDVC+ALLQR S + +  
Sbjct: 531 AEEYFVPDSESLAQIREKFCIQCLEILGEYVEVLGPVLHEKGVDVCLALLQRSSKLTEVS 590

Query: 362 KIVLLLSDVLKLISVLAAHRKF 427
           K   LL DV+KLI  LAAHRKF
Sbjct: 591 KAATLLPDVMKLICALAAHRKF 612


>ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
           max]
          Length = 1857

 Score =  140 bits (352), Expect = 1e-31
 Identities = 77/142 (54%), Positives = 94/142 (66%)
 Frame = +2

Query: 2   TAALEIFKETNDEGXXXXXXXXXXSTVIDAGNAVEVSRSLHGFDAIAMNSQVAEPESNDE 181
           TAA E +K TNDE           STVIDA +AVE             N    E E+N++
Sbjct: 446 TAASEEYKSTNDEEAAFLAASRAASTVIDAASAVE-------------NVSGKEMETNED 492

Query: 182 VKEFFIPDYNILAHLREWFCIQCLQILGEYVEVLGPVLNEKGVDVCIALLQRGSMVQDEP 361
           V+E+FIPD   LA LRE +CIQCL++LGEYVEVLGPVL+EKGVDVC+ALLQ+ S   +  
Sbjct: 493 VEEYFIPDTQSLAQLREKYCIQCLELLGEYVEVLGPVLHEKGVDVCLALLQQNSKHWEAS 552

Query: 362 KIVLLLSDVLKLISVLAAHRKF 427
           K+ LLL D++KLI  LAAHRKF
Sbjct: 553 KVALLLPDIMKLICALAAHRKF 574


>ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
           max]
          Length = 1868

 Score =  138 bits (347), Expect = 5e-31
 Identities = 76/142 (53%), Positives = 93/142 (65%)
 Frame = +2

Query: 2   TAALEIFKETNDEGXXXXXXXXXXSTVIDAGNAVEVSRSLHGFDAIAMNSQVAEPESNDE 181
           TAA E +K +NDE           STVIDA +AVE             N    E E+N++
Sbjct: 457 TAASEEYKSSNDEEAAFLAASRATSTVIDAASAVE-------------NVSGKETETNED 503

Query: 182 VKEFFIPDYNILAHLREWFCIQCLQILGEYVEVLGPVLNEKGVDVCIALLQRGSMVQDEP 361
           V+E+FIPD   LA LRE +CIQCL++LGEYVEVLGPVL+EKGVDVC+ LLQ+ S   +  
Sbjct: 504 VEEYFIPDTKSLAQLREKYCIQCLELLGEYVEVLGPVLHEKGVDVCLGLLQKNSKHWEAS 563

Query: 362 KIVLLLSDVLKLISVLAAHRKF 427
           K+ LLL DV+KLI  LAAHRKF
Sbjct: 564 KVALLLPDVMKLICALAAHRKF 585


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