BLASTX nr result

ID: Bupleurum21_contig00013489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013489
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511095.1| Signal recognition particle 68 kDa protein, ...   153   1e-35
ref|XP_002318768.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_002322302.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
ref|XP_002284577.1| PREDICTED: signal recognition particle 68 kD...   144   6e-33
gb|AFK43644.1| unknown [Medicago truncatula]                          137   1e-30

>ref|XP_002511095.1| Signal recognition particle 68 kDa protein, putative [Ricinus
           communis] gi|223550210|gb|EEF51697.1| Signal recognition
           particle 68 kDa protein, putative [Ricinus communis]
          Length = 594

 Score =  153 bits (387), Expect = 1e-35
 Identities = 73/103 (70%), Positives = 86/103 (83%)
 Frame = +1

Query: 1   KDLKMLYNESRSNSCIEHALGIMELEKAPEKLSEKISTMSLNAKDKKLENFLMDKLDVYE 180
           K+LK LYNE RSNSCIEHA GIME EKAPE LS+K+S +SL+  DKK+E FL++KLDVYE
Sbjct: 475 KELKTLYNECRSNSCIEHASGIMEDEKAPENLSKKVSAISLSGGDKKVEKFLLEKLDVYE 534

Query: 181 SAVADSNTRGAPRIETFPPAFQAVPRNPIVLDLAYNSIEFPSL 309
           SAV D + +  PRIE FPPAFQ +PRNPI+LDLAYN I+FPSL
Sbjct: 535 SAVGDPHVKAPPRIEVFPPAFQTIPRNPIILDLAYNYIDFPSL 577


>ref|XP_002318768.1| predicted protein [Populus trichocarpa] gi|222859441|gb|EEE96988.1|
           predicted protein [Populus trichocarpa]
          Length = 602

 Score =  153 bits (386), Expect = 2e-35
 Identities = 74/103 (71%), Positives = 86/103 (83%)
 Frame = +1

Query: 1   KDLKMLYNESRSNSCIEHALGIMELEKAPEKLSEKISTMSLNAKDKKLENFLMDKLDVYE 180
           K+LK LYNE R+NSCIEHA GIME EKAPE LS+KIST+SL+  DKK E FL++KLDVYE
Sbjct: 483 KELKTLYNECRANSCIEHATGIMEDEKAPENLSKKISTISLSGVDKKAEKFLVEKLDVYE 542

Query: 181 SAVADSNTRGAPRIETFPPAFQAVPRNPIVLDLAYNSIEFPSL 309
           SAV + N +  PRI  FPPAFQ++PRNPIVLDLAYN I+FPSL
Sbjct: 543 SAVGEPNVKSVPRIGVFPPAFQSIPRNPIVLDLAYNCIDFPSL 585


>ref|XP_002322302.1| predicted protein [Populus trichocarpa] gi|222869298|gb|EEF06429.1|
           predicted protein [Populus trichocarpa]
          Length = 601

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/103 (67%), Positives = 85/103 (82%)
 Frame = +1

Query: 1   KDLKMLYNESRSNSCIEHALGIMELEKAPEKLSEKISTMSLNAKDKKLENFLMDKLDVYE 180
           K+L+ L NE R+NSCIEHA GIME EK  E LS+K+ST+SL+  DKK+E FL++KLDVYE
Sbjct: 482 KELRTLNNECRANSCIEHATGIMEHEKVSENLSKKVSTISLSGVDKKVEKFLLEKLDVYE 541

Query: 181 SAVADSNTRGAPRIETFPPAFQAVPRNPIVLDLAYNSIEFPSL 309
           SAV + N +  PRIE FPPAFQ++PRNPIVLDLAYN I+FPSL
Sbjct: 542 SAVGEPNVKSVPRIEVFPPAFQSIPRNPIVLDLAYNCIDFPSL 584


>ref|XP_002284577.1| PREDICTED: signal recognition particle 68 kDa protein [Vitis
           vinifera] gi|147791928|emb|CAN67894.1| hypothetical
           protein VITISV_040392 [Vitis vinifera]
           gi|297734504|emb|CBI15751.3| unnamed protein product
           [Vitis vinifera]
          Length = 595

 Score =  144 bits (364), Expect = 6e-33
 Identities = 71/103 (68%), Positives = 81/103 (78%)
 Frame = +1

Query: 1   KDLKMLYNESRSNSCIEHALGIMELEKAPEKLSEKISTMSLNAKDKKLENFLMDKLDVYE 180
           K LKMLYN+ RSNSCIEHA  IME EKAPE LS+KIS +SL    KK+E  LM+KLDVYE
Sbjct: 476 KGLKMLYNDCRSNSCIEHATVIMEEEKAPENLSQKISNISLAGAHKKVETSLMEKLDVYE 535

Query: 181 SAVADSNTRGAPRIETFPPAFQAVPRNPIVLDLAYNSIEFPSL 309
           S V  SN +  PRIE FPPAFQ +PRNPIVLD+AYN ++FPSL
Sbjct: 536 SLVGASNVKSVPRIEAFPPAFQTIPRNPIVLDIAYNFVDFPSL 578


>gb|AFK43644.1| unknown [Medicago truncatula]
          Length = 368

 Score =  137 bits (344), Expect = 1e-30
 Identities = 68/103 (66%), Positives = 83/103 (80%)
 Frame = +1

Query: 1   KDLKMLYNESRSNSCIEHALGIMELEKAPEKLSEKISTMSLNAKDKKLENFLMDKLDVYE 180
           K+L++L NE RSNSCIEHALGIME ++  E +SE IS +SL   ++ LE FL++KLDVYE
Sbjct: 247 KELEVLCNECRSNSCIEHALGIMEEKRTQENISEGISNISLTGAER-LEKFLLEKLDVYE 305

Query: 181 SAVADSNTRGAPRIETFPPAFQAVPRNPIVLDLAYNSIEFPSL 309
           SAV DSN + APRI  FPPAFQA+ RNPIVLDLAYN+IEFP +
Sbjct: 306 SAVGDSNVKSAPRIAPFPPAFQAIARNPIVLDLAYNTIEFPDI 348


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