BLASTX nr result

ID: Bupleurum21_contig00013479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013479
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278358.1| PREDICTED: uncharacterized protein LOC100241...   155   3e-36
ref|XP_002298011.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|NP_198971.1| DET1- and DDB1-associated protein 1 [Arabidopsi...   144   7e-33
ref|XP_002868586.1| hypothetical protein ARALYDRAFT_493832 [Arab...   143   2e-32
ref|XP_004143885.1| PREDICTED: uncharacterized protein LOC101213...   142   4e-32

>ref|XP_002278358.1| PREDICTED: uncharacterized protein LOC100241601 [Vitis vinifera]
           gi|297742241|emb|CBI34390.3| unnamed protein product
           [Vitis vinifera]
          Length = 95

 Score =  155 bits (392), Expect = 3e-36
 Identities = 73/95 (76%), Positives = 80/95 (84%)
 Frame = -3

Query: 293 MGSILGDLPSYDPHNFSQLRPSDPKNPSKKTPITYRPTHDRTLPPPDQVIASEAKNILMR 114
           MGS LGD PS+DPHNFSQLRPSDP NPSK  P TY PTHDRTLPPPDQVI++E KNIL+R
Sbjct: 1   MGSTLGDWPSFDPHNFSQLRPSDPSNPSKMIPATYHPTHDRTLPPPDQVISTETKNILLR 60

Query: 113 HFYMRAEEKLRSKRSASENLTPEQVRKHPRASTSE 9
           HFY RAEEKLR KR+ASE+LTPE   K PRAS S+
Sbjct: 61  HFYQRAEEKLRPKRAASEHLTPEHGCKQPRASASD 95


>ref|XP_002298011.1| predicted protein [Populus trichocarpa] gi|222845269|gb|EEE82816.1|
           predicted protein [Populus trichocarpa]
          Length = 94

 Score =  150 bits (379), Expect = 1e-34
 Identities = 72/94 (76%), Positives = 79/94 (84%)
 Frame = -3

Query: 293 MGSILGDLPSYDPHNFSQLRPSDPKNPSKKTPITYRPTHDRTLPPPDQVIASEAKNILMR 114
           MGS+LGD PS+DPHNFSQLRPSDP NPSK TP TY PTH RTLPPPDQVI +EAKNIL+R
Sbjct: 1   MGSLLGDWPSFDPHNFSQLRPSDPSNPSKMTPATYHPTHSRTLPPPDQVITTEAKNILLR 60

Query: 113 HFYMRAEEKLRSKRSASENLTPEQVRKHPRASTS 12
           +FY RAEEKLR KR+ASE+L PE   K  RASTS
Sbjct: 61  NFYERAEEKLRQKRAASEHLMPEHGCKQARASTS 94


>ref|NP_198971.1| DET1- and DDB1-associated protein 1 [Arabidopsis thaliana]
           gi|10178010|dbj|BAB11462.1| unnamed protein product
           [Arabidopsis thaliana] gi|30725336|gb|AAP37690.1|
           At5g41560 [Arabidopsis thaliana]
           gi|110736600|dbj|BAF00265.1| hypothetical protein
           [Arabidopsis thaliana] gi|332007309|gb|AED94692.1| DET1-
           and DDB1-associated protein 1 [Arabidopsis thaliana]
          Length = 101

 Score =  144 bits (363), Expect = 7e-33
 Identities = 68/96 (70%), Positives = 78/96 (81%)
 Frame = -3

Query: 293 MGSILGDLPSYDPHNFSQLRPSDPKNPSKKTPITYRPTHDRTLPPPDQVIASEAKNILMR 114
           M SILGDLPS+DPHNFSQ RPSDP NPSK  P TYRPTH+RTLPPPDQVI +E KNIL+R
Sbjct: 1   MASILGDLPSFDPHNFSQHRPSDPSNPSKMVPTTYRPTHNRTLPPPDQVITTEVKNILIR 60

Query: 113 HFYMRAEEKLRSKRSASENLTPEQVRKHPRASTSEA 6
            FY RAEEKLR KR A+++L  E V KH RA++S +
Sbjct: 61  SFYQRAEEKLRPKRPATDHLAAEHVNKHFRAASSSS 96


>ref|XP_002868586.1| hypothetical protein ARALYDRAFT_493832 [Arabidopsis lyrata subsp.
           lyrata] gi|297314422|gb|EFH44845.1| hypothetical protein
           ARALYDRAFT_493832 [Arabidopsis lyrata subsp. lyrata]
          Length = 101

 Score =  143 bits (360), Expect = 2e-32
 Identities = 67/96 (69%), Positives = 78/96 (81%)
 Frame = -3

Query: 293 MGSILGDLPSYDPHNFSQLRPSDPKNPSKKTPITYRPTHDRTLPPPDQVIASEAKNILMR 114
           M SILGDLPS+DPHNFSQ RPSDP NPS+  P TYRPTH+RTLPPPDQVI +E KNIL+R
Sbjct: 1   MASILGDLPSFDPHNFSQHRPSDPSNPSRMVPTTYRPTHNRTLPPPDQVITTEVKNILIR 60

Query: 113 HFYMRAEEKLRSKRSASENLTPEQVRKHPRASTSEA 6
            FY RAEEKLR KR A+++L  E V KH RA++S +
Sbjct: 61  SFYQRAEEKLRPKRPATDHLAAEHVNKHFRAASSSS 96


>ref|XP_004143885.1| PREDICTED: uncharacterized protein LOC101213287 [Cucumis sativus]
           gi|449519112|ref|XP_004166579.1| PREDICTED:
           uncharacterized LOC101213287 [Cucumis sativus]
          Length = 98

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/94 (71%), Positives = 74/94 (78%)
 Frame = -3

Query: 293 MGSILGDLPSYDPHNFSQLRPSDPKNPSKKTPITYRPTHDRTLPPPDQVIASEAKNILMR 114
           MGS+LGDLPSYDPHNFSQLRPSDP  PSK  P TY PTH RTLPPPDQVI +EAKNIL+R
Sbjct: 1   MGSMLGDLPSYDPHNFSQLRPSDPSTPSKMIPATYHPTHSRTLPPPDQVINTEAKNILIR 60

Query: 113 HFYMRAEEKLRSKRSASENLTPEQVRKHPRASTS 12
           H Y   EEK R+KR A+E+  PE   K PRAST+
Sbjct: 61  HIYQHTEEKSRTKRPAAEHPMPEHGSKQPRASTT 94


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