BLASTX nr result

ID: Bupleurum21_contig00013464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013464
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520047.1| nucleic acid binding protein, putative [Rici...   136   2e-30
ref|XP_002274164.1| PREDICTED: uncharacterized protein LOC100244...   135   3e-30
ref|XP_002326541.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28
gb|ABK94686.1| unknown [Populus trichocarpa]                          127   9e-28
ref|XP_004165582.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   125   5e-27

>ref|XP_002520047.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223540811|gb|EEF42371.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 269

 Score =  136 bits (343), Expect = 2e-30
 Identities = 71/101 (70%), Positives = 78/101 (77%)
 Frame = +1

Query: 70  EHDIKEFFSFSGDIEYIDLQSDTERSQIAYVTFKDPQGAETAVLLSGATIVDQSVTIALA 249
           E DIKEFFSFSGDI+Y++L  D ERSQIAYVTFKD QGAETAVLLSGATIVDQSVTI LA
Sbjct: 17  EQDIKEFFSFSGDIDYVELLGDNERSQIAYVTFKDQQGAETAVLLSGATIVDQSVTIELA 76

Query: 250 PDYKLXXXXXXXXXXXENQNVSGSPSAVQKAEDVVSGMLAR 372
           PDYKL           E+   SG+ SA QKAED+VS MLA+
Sbjct: 77  PDYKLPAAASVPTTATESSTASGAESAFQKAEDIVSSMLAK 117


>ref|XP_002274164.1| PREDICTED: uncharacterized protein LOC100244246 [Vitis vinifera]
           gi|297737304|emb|CBI26505.3| unnamed protein product
           [Vitis vinifera]
          Length = 277

 Score =  135 bits (340), Expect = 3e-30
 Identities = 70/101 (69%), Positives = 78/101 (77%)
 Frame = +1

Query: 70  EHDIKEFFSFSGDIEYIDLQSDTERSQIAYVTFKDPQGAETAVLLSGATIVDQSVTIALA 249
           E DIKEFFSFSG+IEY+++QS+ ERSQ+AYVTFKD QGAETAVLLSGATIVD SV IA A
Sbjct: 17  EQDIKEFFSFSGEIEYVEMQSENERSQVAYVTFKDTQGAETAVLLSGATIVDMSVIIAPA 76

Query: 250 PDYKLXXXXXXXXXXXENQNVSGSPSAVQKAEDVVSGMLAR 372
           PDYKL           EN NV    S +QKAEDVVSGMLA+
Sbjct: 77  PDYKLPAAASVQPRATENTNVGAGESPLQKAEDVVSGMLAK 117


>ref|XP_002326541.1| predicted protein [Populus trichocarpa] gi|222833863|gb|EEE72340.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score =  127 bits (319), Expect = 9e-28
 Identities = 67/101 (66%), Positives = 79/101 (78%)
 Frame = +1

Query: 70  EHDIKEFFSFSGDIEYIDLQSDTERSQIAYVTFKDPQGAETAVLLSGATIVDQSVTIALA 249
           E D+KEFFSFSGDIEY++++SD ERSQIAYVTFKD QGA+TAVLLSGATIVD SVT+AL 
Sbjct: 17  ERDLKEFFSFSGDIEYVEMKSDNERSQIAYVTFKDSQGADTAVLLSGATIVDLSVTVALD 76

Query: 250 PDYKLXXXXXXXXXXXENQNVSGSPSAVQKAEDVVSGMLAR 372
           PDY+L            N+   G  SA++KAEDVVSGMLA+
Sbjct: 77  PDYQLPPAALAELSATGNK-APGDESALRKAEDVVSGMLAK 116


>gb|ABK94686.1| unknown [Populus trichocarpa]
          Length = 280

 Score =  127 bits (319), Expect = 9e-28
 Identities = 67/101 (66%), Positives = 79/101 (78%)
 Frame = +1

Query: 70  EHDIKEFFSFSGDIEYIDLQSDTERSQIAYVTFKDPQGAETAVLLSGATIVDQSVTIALA 249
           E D+KEFFSFSGDIEY++++SD ERSQIAYVTFKD QGA+TAVLLSGATIVD SVT+AL 
Sbjct: 17  ERDLKEFFSFSGDIEYVEMKSDNERSQIAYVTFKDSQGADTAVLLSGATIVDLSVTVALD 76

Query: 250 PDYKLXXXXXXXXXXXENQNVSGSPSAVQKAEDVVSGMLAR 372
           PDY+L            N+   G  SA++KAEDVVSGMLA+
Sbjct: 77  PDYQLPPAALAELSATGNK-APGDESALRKAEDVVSGMLAK 116


>ref|XP_004165582.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101228210 [Cucumis sativus]
          Length = 284

 Score =  125 bits (313), Expect = 5e-27
 Identities = 66/101 (65%), Positives = 75/101 (74%)
 Frame = +1

Query: 70  EHDIKEFFSFSGDIEYIDLQSDTERSQIAYVTFKDPQGAETAVLLSGATIVDQSVTIALA 249
           E DIKEFFSFSGDIEY+++QS+TERSQ AYVTFKD QGAETAVLLSGATIVD SV I L 
Sbjct: 17  ERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLC 76

Query: 250 PDYKLXXXXXXXXXXXENQNVSGSPSAVQKAEDVVSGMLAR 372
           PDY+L             +    + SA +KAEDVVSGMLA+
Sbjct: 77  PDYELPPEATAPPPAPGTKPPGAAESAFRKAEDVVSGMLAK 117


Top