BLASTX nr result

ID: Bupleurum21_contig00013448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013448
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634482.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-D4-2-...   174   7e-42
emb|CBI19236.3| unnamed protein product [Vitis vinifera]              174   7e-42
ref|XP_003544823.1| PREDICTED: cyclin-D4-1-like [Glycine max]         172   3e-41
ref|XP_003518252.1| PREDICTED: cyclin-D4-1-like [Glycine max]         172   3e-41
ref|XP_002514014.1| cyclin d, putative [Ricinus communis] gi|223...   170   1e-40

>ref|XP_003634482.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-D4-2-like [Vitis vinifera]
          Length = 325

 Score =  174 bits (441), Expect = 7e-42
 Identities = 88/120 (73%), Positives = 102/120 (85%)
 Frame = +3

Query: 3   CLSLAAKMEETEVPLCLDLQVGDSKFIFEARTIQRMELLVLSTLKWRMQSITPFSFIDNF 182
           CLSLAAKMEE EVPLCLDLQV +S+F+FEARTIQRMELLVL TLKWRMQ++TPFSF+D F
Sbjct: 151 CLSLAAKMEENEVPLCLDLQVAESRFVFEARTIQRMELLVLRTLKWRMQAVTPFSFVDYF 210

Query: 183 LAKMMGDHDISTLPIFRSTQLILSMLKGIDFLEFRPSEIAAAVALSVAGETQTVETEKAL 362
           L ++  D   +   I  S QLILS +KGIDFLEFRPSEIAAAVA+S+AGETQTV+ EKA+
Sbjct: 211 LRRINDDEFPARTSILLSIQLILSTVKGIDFLEFRPSEIAAAVAISIAGETQTVDIEKAI 270


>emb|CBI19236.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  174 bits (441), Expect = 7e-42
 Identities = 88/120 (73%), Positives = 102/120 (85%)
 Frame = +3

Query: 3   CLSLAAKMEETEVPLCLDLQVGDSKFIFEARTIQRMELLVLSTLKWRMQSITPFSFIDNF 182
           CLSLAAKMEE EVPLCLDLQV +S+F+FEARTIQRMELLVL TLKWRMQ++TPFSF+D F
Sbjct: 151 CLSLAAKMEENEVPLCLDLQVAESRFVFEARTIQRMELLVLRTLKWRMQAVTPFSFVDYF 210

Query: 183 LAKMMGDHDISTLPIFRSTQLILSMLKGIDFLEFRPSEIAAAVALSVAGETQTVETEKAL 362
           L ++  D   +   I  S QLILS +KGIDFLEFRPSEIAAAVA+S+AGETQTV+ EKA+
Sbjct: 211 LRRINDDEFPARTSILLSIQLILSTVKGIDFLEFRPSEIAAAVAISIAGETQTVDIEKAI 270


>ref|XP_003544823.1| PREDICTED: cyclin-D4-1-like [Glycine max]
          Length = 355

 Score =  172 bits (435), Expect = 3e-41
 Identities = 89/120 (74%), Positives = 102/120 (85%)
 Frame = +3

Query: 3   CLSLAAKMEETEVPLCLDLQVGDSKFIFEARTIQRMELLVLSTLKWRMQSITPFSFIDNF 182
           CLSLAAKMEET+VP  LDLQVG+SK+IFEA+TIQRMELLVLSTL+WRMQ+ITPFSFID+F
Sbjct: 148 CLSLAAKMEETDVPFSLDLQVGESKYIFEAKTIQRMELLVLSTLRWRMQAITPFSFIDHF 207

Query: 183 LAKMMGDHDISTLPIFRSTQLILSMLKGIDFLEFRPSEIAAAVALSVAGETQTVETEKAL 362
           L K+  D       I +S QLILS ++GIDFLEFRPSEIAAAVA+SV GE QTV TEKA+
Sbjct: 208 LYKINDDQSPIGASILQSIQLILSTVRGIDFLEFRPSEIAAAVAISVVGEGQTVHTEKAI 267


>ref|XP_003518252.1| PREDICTED: cyclin-D4-1-like [Glycine max]
          Length = 357

 Score =  172 bits (435), Expect = 3e-41
 Identities = 88/120 (73%), Positives = 103/120 (85%)
 Frame = +3

Query: 3   CLSLAAKMEETEVPLCLDLQVGDSKFIFEARTIQRMELLVLSTLKWRMQSITPFSFIDNF 182
           CLSLAAKMEET+ P+ LDLQVG+SK+IFEA+TIQRMELLVLSTL+WRMQ+ITPFSFID+F
Sbjct: 148 CLSLAAKMEETDAPMSLDLQVGESKYIFEAKTIQRMELLVLSTLRWRMQAITPFSFIDHF 207

Query: 183 LAKMMGDHDISTLPIFRSTQLILSMLKGIDFLEFRPSEIAAAVALSVAGETQTVETEKAL 362
           L K+  D       I +S QLILS ++GIDFLEFRPSEIAAAVA+SV GE QTV+TEKA+
Sbjct: 208 LYKINDDQSPIGASILQSIQLILSTVRGIDFLEFRPSEIAAAVAISVVGEGQTVQTEKAI 267


>ref|XP_002514014.1| cyclin d, putative [Ricinus communis] gi|223547100|gb|EEF48597.1|
           cyclin d, putative [Ricinus communis]
          Length = 354

 Score =  170 bits (431), Expect = 1e-40
 Identities = 84/121 (69%), Positives = 105/121 (86%)
 Frame = +3

Query: 3   CLSLAAKMEETEVPLCLDLQVGDSKFIFEARTIQRMELLVLSTLKWRMQSITPFSFIDNF 182
           CLS+AAKMEETEVP+ LDLQVG+S+F+FEARTIQRMELLVLSTL WRM++ITPFSFID+F
Sbjct: 151 CLSIAAKMEETEVPIFLDLQVGESRFVFEARTIQRMELLVLSTLSWRMKAITPFSFIDDF 210

Query: 183 LAKMMGDHDISTLPIFRSTQLILSMLKGIDFLEFRPSEIAAAVALSVAGETQTVETEKAL 362
           L K+  D +  T  I +S QLILS++KGIDFLEFRPSE+AAAV ++V GE +TV+ E+A+
Sbjct: 211 LNKINNDENPPTSLILQSIQLILSIIKGIDFLEFRPSEVAAAVTIAVVGEIRTVDAEQAI 270

Query: 363 Y 365
           +
Sbjct: 271 F 271


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