BLASTX nr result

ID: Bupleurum21_contig00013434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013434
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518104.1| transcription factor, putative [Ricinus comm...   178   9e-43
ref|XP_002268698.2| PREDICTED: uncharacterized protein LOC100250...   174   1e-41
gb|ABK94861.1| unknown [Populus trichocarpa]                          174   2e-41
ref|XP_002300173.1| predicted protein [Populus trichocarpa] gi|2...   168   1e-39
emb|CCA29095.1| putative MYB transcription factor [Rosa rugosa] ...   166   4e-39

>ref|XP_002518104.1| transcription factor, putative [Ricinus communis]
           gi|223542700|gb|EEF44237.1| transcription factor,
           putative [Ricinus communis]
          Length = 303

 Score =  178 bits (452), Expect = 9e-43
 Identities = 101/184 (54%), Positives = 118/184 (64%), Gaps = 7/184 (3%)
 Frame = +1

Query: 1   TSASSRMMSKDLNDGFQVTEALRVQMEVQRRLHDQLEVQRRLQLRIEAQGRYLQSILEKA 180
           TS SSRM+++D+NDG+QVTEALRVQMEVQRRLH+QLEVQRRLQLRIEAQG+YLQSILEKA
Sbjct: 119 TSTSSRMIAQDVNDGYQVTEALRVQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILEKA 178

Query: 181 CKALEGQTVASVGXXXXXXXXXXXXIKVANDCHQVITA-----PSLSEIAASLEREKPIC 345
           CKAL  Q   S G            IKV+N+C  ++ A     PSLSE+A +LE +    
Sbjct: 179 CKALNDQAAVSAGLEAAREELSELAIKVSNECQGIVPADNMKMPSLSELAVALESKSTSN 238

Query: 346 LPARIGDCXXXXXXXXXXXXXXPMGIGSQAGALKKRSRP-FXXXXXXXXXXXXRQ-VEWM 519
           LPARIGDC              PMG+GS   ++KKR RP F            RQ VEWM
Sbjct: 239 LPARIGDCSVESCLTSTGSPVSPMGVGSHTASIKKRPRPIFGNGDSLPLEGSMRQEVEWM 298

Query: 520 MSNI 531
           M NI
Sbjct: 299 MGNI 302


>ref|XP_002268698.2| PREDICTED: uncharacterized protein LOC100250267 [Vitis vinifera]
          Length = 307

 Score =  174 bits (442), Expect = 1e-41
 Identities = 99/184 (53%), Positives = 119/184 (64%), Gaps = 7/184 (3%)
 Frame = +1

Query: 1   TSASSRMMSKDLNDGFQVTEALRVQMEVQRRLHDQLEVQRRLQLRIEAQGRYLQSILEKA 180
           +++SSRM+ +DLNDG+QVTEALRVQMEVQRRLH+QLEVQR LQLRIEAQG+YLQSILEKA
Sbjct: 123 STSSSRMIPQDLNDGYQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILEKA 182

Query: 181 CKALEGQTVASVGXXXXXXXXXXXXIKVANDCH-----QVITAPSLSEIAASLEREKPIC 345
           CKAL+ Q  A+ G            IKV+NDC      + I  P LSEIAA+LE +  + 
Sbjct: 183 CKALKDQAAATAGLEAAREELSELQIKVSNDCEGMNPLETIKMPCLSEIAAALENKNAVN 242

Query: 346 LPARIGDCXXXXXXXXXXXXXXPMGIGSQAGALKKRSRP-FXXXXXXXXXXXXRQ-VEWM 519
           +PARIGDC              PMG  S+   +KKRSRP F            RQ VEWM
Sbjct: 243 VPARIGDCSVDSCLTSSGSPISPMGASSRGAVMKKRSRPLFTGGSSLALENNMRQDVEWM 302

Query: 520 MSNI 531
           M+N+
Sbjct: 303 MTNM 306


>gb|ABK94861.1| unknown [Populus trichocarpa]
          Length = 309

 Score =  174 bits (441), Expect = 2e-41
 Identities = 99/184 (53%), Positives = 117/184 (63%), Gaps = 7/184 (3%)
 Frame = +1

Query: 1   TSASSRMMSKDLNDGFQVTEALRVQMEVQRRLHDQLEVQRRLQLRIEAQGRYLQSILEKA 180
           TSASSRM+++DLNDG+QVTEALRVQMEVQRRLH+QLEVQ  LQLRIEAQG+YLQSILEKA
Sbjct: 123 TSASSRMIAQDLNDGYQVTEALRVQMEVQRRLHEQLEVQHHLQLRIEAQGKYLQSILEKA 182

Query: 181 CKALEGQTVASVGXXXXXXXXXXXXIKVANDCHQV-----ITAPSLSEIAASLEREKPIC 345
           CKAL  Q VA+ G            IKV+N+C  +     +  PSLSE+AA+L       
Sbjct: 183 CKALNDQAVATAGLEAAREELSELAIKVSNECAGIAPLDTMKMPSLSELAAALGNRNASN 242

Query: 346 LPARIGDCXXXXXXXXXXXXXXPMGIGSQAGALKKRSRPF--XXXXXXXXXXXXRQVEWM 519
           +PARIGDC              PMG+GSQ  + KKRSRP               ++VEW 
Sbjct: 243 VPARIGDCSVESCLTSTSSPVSPMGVGSQVASTKKRSRPVLGNGDSLPFEGNFRQEVEWT 302

Query: 520 MSNI 531
           MSNI
Sbjct: 303 MSNI 306


>ref|XP_002300173.1| predicted protein [Populus trichocarpa] gi|222847431|gb|EEE84978.1|
           predicted protein [Populus trichocarpa]
          Length = 285

 Score =  168 bits (425), Expect = 1e-39
 Identities = 91/159 (57%), Positives = 111/159 (69%), Gaps = 5/159 (3%)
 Frame = +1

Query: 1   TSASSRMMSKDLNDGFQVTEALRVQMEVQRRLHDQLEVQRRLQLRIEAQGRYLQSILEKA 180
           TSASSRM+++DLNDG+QVTEALRVQMEVQRRLH+QLEVQRRLQLRIEAQG+YLQSILEKA
Sbjct: 119 TSASSRMIAQDLNDGYQVTEALRVQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILEKA 178

Query: 181 CKALEGQTVASVGXXXXXXXXXXXXIKVANDCHQV-----ITAPSLSEIAASLEREKPIC 345
           CKAL  Q VA+ G            IKV+N+   +     +  PS+SE+AA+LE +    
Sbjct: 179 CKALNDQAVATAGLEAAREELSELAIKVSNERAGIAPLDTMKMPSISELAAALENKHASN 238

Query: 346 LPARIGDCXXXXXXXXXXXXXXPMGIGSQAGALKKRSRP 462
           +PAR+GDC              PMG+G+Q  + KKRSRP
Sbjct: 239 VPARVGDCSVESCLTSTGSPVSPMGVGAQVASTKKRSRP 277


>emb|CCA29095.1| putative MYB transcription factor [Rosa rugosa]
           gi|327412625|emb|CCA29101.1| putative MYB transcription
           factor [Rosa rugosa]
          Length = 307

 Score =  166 bits (421), Expect = 4e-39
 Identities = 95/185 (51%), Positives = 117/185 (63%), Gaps = 7/185 (3%)
 Frame = +1

Query: 1   TSASSRMMSKDLNDGFQVTEALRVQMEVQRRLHDQLEVQRRLQLRIEAQGRYLQSILEKA 180
           ++ SSR++++DLNDG+QVTEALRVQMEVQRRLH+QLEVQRRLQLRIEAQG+YLQSILEKA
Sbjct: 123 SATSSRVIAQDLNDGYQVTEALRVQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILEKA 182

Query: 181 CKALEGQTVASVGXXXXXXXXXXXXIKVANDCH-----QVITAPSLSEIAASLEREKPIC 345
           CKAL  Q   + G            IKV++DC        I   SLSEIAA++E +    
Sbjct: 183 CKALNDQAATAAGLEAAKEELSELAIKVSSDCQGMAPLDTIKMQSLSEIAAAIENKSASN 242

Query: 346 LPARIGDCXXXXXXXXXXXXXXPMGIGSQAGALKKRSRPF--XXXXXXXXXXXXRQVEWM 519
           + ARIG+C              PMG+ S A A+KKR RPF              ++VEWM
Sbjct: 243 VLARIGNCSVDSCLTSTGSPGSPMGMSSLAAAMKKRQRPFFSNGDSLPLEGNMRQEVEWM 302

Query: 520 MSNIS 534
           MSNI+
Sbjct: 303 MSNIA 307


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