BLASTX nr result

ID: Bupleurum21_contig00013416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013416
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544337.1| PREDICTED: uncharacterized protein LOC100799...    64   1e-08
ref|XP_002887590.1| expressed protein [Arabidopsis lyrata subsp....    64   1e-08
ref|NP_001117603.1| conserved peptide upstream open reading fram...    59   5e-07

>ref|XP_003544337.1| PREDICTED: uncharacterized protein LOC100799960 [Glycine max]
           gi|356564302|ref|XP_003550394.1| PREDICTED:
           uncharacterized protein LOC100799844 [Glycine max]
          Length = 41

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/41 (80%), Positives = 35/41 (85%), Gaps = 3/41 (7%)
 Frame = +1

Query: 253 MSPVISEILRSGFMINTYLR---HLVQSFSVCFLYWFYDFS 366
           MSPV+SEILRSGFMIN+ LR   HLVQSFSV FLYWFY FS
Sbjct: 1   MSPVLSEILRSGFMINSSLRRRTHLVQSFSVVFLYWFYVFS 41


>ref|XP_002887590.1| expressed protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333431|gb|EFH63849.1| expressed protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 53

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/48 (70%), Positives = 38/48 (79%), Gaps = 3/48 (6%)
 Frame = +1

Query: 232 ELDV*IYMSPVISEILRSGFMINTYLR---HLVQSFSVCFLYWFYDFS 366
           +LDV  +MSPVISEILRSG  I++ LR   HLVQSFSV FLYWFY FS
Sbjct: 6   DLDVQTFMSPVISEILRSGLTIDSSLRRRTHLVQSFSVVFLYWFYVFS 53


>ref|NP_001117603.1| conserved peptide upstream open reading frame 5 [Arabidopsis
           thaliana] gi|332197591|gb|AEE35712.1| conserved peptide
           upstream open reading frame 5 [Arabidopsis thaliana]
          Length = 41

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/41 (75%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
 Frame = +1

Query: 253 MSPVISEILRSGFMINTYLR---HLVQSFSVCFLYWFYDFS 366
           MSPVISEILRSG  I++ LR   HLVQSFSV FLYWFY FS
Sbjct: 1   MSPVISEILRSGLTIDSSLRRRTHLVQSFSVVFLYWFYVFS 41


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