BLASTX nr result

ID: Bupleurum21_contig00013407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013407
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319354.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002319353.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>ref|XP_002319354.1| predicted protein [Populus trichocarpa] gi|222857730|gb|EEE95277.1|
           predicted protein [Populus trichocarpa]
          Length = 705

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 7/97 (7%)
 Frame = +1

Query: 1   QNILHLAAASGSRNGMVQGILKYCPEKYK---DEILKQQDNDGNTPLHLLFSHG----CF 159
           QNILH+AA +G  N     +++Y  E+Y+   + +L + D DGNTPLHL   HG     F
Sbjct: 303 QNILHVAAENGQGN-----VVRYILEQYQKIVEPLLNEMDEDGNTPLHLAARHGQSTAAF 357

Query: 160 IPELIKHKGVDHTMAKNKKDFTPLDMLYVEDDIVADQ 270
           +  L++ K V +++  N ++FTP D+   +  +  DQ
Sbjct: 358 V--LVRDKRVKNSIV-NNENFTPYDVAKQQSKMAVDQ 391


>ref|XP_002319353.1| predicted protein [Populus trichocarpa] gi|222857729|gb|EEE95276.1|
           predicted protein [Populus trichocarpa]
          Length = 673

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
 Frame = +1

Query: 1   QNILHLAAASGSRNGMVQGILKYCPEKYKDEILKQQDNDGNTPLHLLFSHGCFIPE--LI 174
           QNILH+AA +G  N +V+ IL+   +   + +L + D DGNTPLHL  SHG  +    L+
Sbjct: 298 QNILHVAAENGKGN-VVRYILRQ-EKTLVEPLLNEMDEDGNTPLHLATSHGQSVAAFVLV 355

Query: 175 KHKGVDHTMAKNKKDFTPLDMLYVEDDIVADQ 270
           + K VD ++  N ++ TP D+   +  I  +Q
Sbjct: 356 RDKRVDSSIV-NNENLTPYDIAEKQSKIAVEQ 386


Top