BLASTX nr result

ID: Bupleurum21_contig00013404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013404
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271475.2| PREDICTED: uncharacterized protein LOC100249...    87   3e-15
ref|XP_003551499.1| PREDICTED: uncharacterized basic helix-loop-...    77   3e-12
ref|XP_003530224.1| PREDICTED: uncharacterized basic helix-loop-...    76   7e-12
ref|NP_001234845.1| Prf interactor 30137 [Solanum lycopersicum] ...    74   2e-11
ref|XP_003632423.1| PREDICTED: uncharacterized basic helix-loop-...    73   6e-11

>ref|XP_002271475.2| PREDICTED: uncharacterized protein LOC100249509 [Vitis vinifera]
           gi|297740322|emb|CBI30504.3| unnamed protein product
           [Vitis vinifera]
          Length = 720

 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 2/216 (0%)
 Frame = +1

Query: 31  PDDWIYQFAAGIKTIILVPVVPHGVLQLGSLETVAEDQAVVANVSDQFIAFQELVGKFGS 210
           PD+W+ QF AGIKT++LVPV+PHGVLQLGSLE VAE+ AVVA + D F   Q  VG    
Sbjct: 134 PDEWLLQFVAGIKTVLLVPVIPHGVLQLGSLEKVAENVAVVACIKDSFDTLQNEVGFSVP 193

Query: 211 FSENLHCSTYSASPRMCTLVENVSADITMDGLKSDQFNEMFSINQPWHMFSTTNQITQLN 390
           F  N +C  +        +V++V            + +++ S NQ   +F+       + 
Sbjct: 194 FISNWNCLLHKVLYEDSEVVDSV----------KPKNSKLLSTNQAIPLFT-------VQ 236

Query: 391 DAENFEARYVEDVLKVSTSSITNDAKVLPICSTE--ELDGPIPFSQSLSCNTTEMESRFM 564
           DA  F+A + ED+  +  S    +  V  +   E   L G    +       + + SRF 
Sbjct: 237 DA--FQA-FGEDLPLIHESESKKEISVFSVGLNEVSTLKGQCINNSQWGVIESNL-SRFS 292

Query: 565 SPFIQKQAHPFSHPNNDNVGAVREFAKNINSSFDKG 672
              ++++ H  S  NN N+  + E ++ I +S+  G
Sbjct: 293 C--LEEELHAVSQYNNYNLEVLEESSEGIMNSYCAG 326


>ref|XP_003551499.1| PREDICTED: uncharacterized basic helix-loop-helix protein
           At1g06150-like [Glycine max]
          Length = 698

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
 Frame = +1

Query: 22  SKIPDDWIYQFAAGIKTIILVPVVPHGVLQLGSLETVAEDQAVVANVSDQFIAFQELVGK 201
           ++ PD+W+ QFA GIKTI+LVPV+P GVLQ GS E VAED+  V N+ ++F +   L   
Sbjct: 122 TECPDEWLLQFACGIKTIVLVPVLPQGVLQFGSFEAVAEDKEFVTNIKEKFYSTHYLEAD 181

Query: 202 FGSFSENLHCSTYSASPRMCTL---VENVSADITMDGLKSDQFNEMFSIN 342
               +    C   S S  M  L   ++  S+ +T   LKS+      ++N
Sbjct: 182 ITPLNLGTDCQDVSFSDLMHNLMGSLDESSSSVTKSILKSEVSTSPAALN 231


>ref|XP_003530224.1| PREDICTED: uncharacterized basic helix-loop-helix protein
           At1g06150-like [Glycine max]
          Length = 699

 Score = 75.9 bits (185), Expect = 7e-12
 Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = +1

Query: 31  PDDWIYQFAAGIKTIILVPVVPHGVLQLGSLETVAEDQAVVANVSDQFIAFQELVGKFGS 210
           PD+W+ QFA GIKTI+LVPV+P GVLQ GS E VAED+  V N+ D+F     L      
Sbjct: 125 PDEWLLQFACGIKTIVLVPVLPLGVLQFGSFEAVAEDKEFVTNIMDKFHFTHHLEANITP 184

Query: 211 FSENLHCSTYSASPRMCTLVENV--SADITMDGLKSDQFNEMFSIN 342
            +    C   S S  M  L++++  S  +T   LK++      ++N
Sbjct: 185 LNLGTDCQDLSFSDLMHNLMDSLDESYSVTKSILKTEVSTSTAALN 230


>ref|NP_001234845.1| Prf interactor 30137 [Solanum lycopersicum]
           gi|56157408|gb|AAV80420.1| Prf interactor 30137 [Solanum
           lycopersicum]
          Length = 740

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 58/155 (37%), Positives = 84/155 (54%), Gaps = 14/155 (9%)
 Frame = +1

Query: 16  SKSKIPDDWIYQFAAGIKTIILVPVVPHGVLQLGSLETVAEDQAVVANVSDQFIAFQELV 195
           S ++ PD W+ QF AGIKTI+LVP +P GVLQLGS+ETVAE+  +V  ++++F A  + V
Sbjct: 129 SVAECPDKWMLQFVAGIKTILLVPCIPXGVLQLGSVETVAENMEMVTILAEEFDAHLKFV 188

Query: 196 GKF---GSFSENLHCSTYSAS---PRMCTL----VENVSADI-TMDGLKSDQFNEMFSIN 342
             F   G   E L  ST S +   P   T      ++V+ADI  ++  KS     M S+ 
Sbjct: 189 ESFLPGGESCEFLLQSTLSETLNIPSATTTNKVNEDDVAADIPIVEDHKSSAVFPMTSLI 248

Query: 343 QPWHMFSTTNQITQ---LNDAENFEARYVEDVLKV 438
              H F  + Q  Q    N+ E+   ++VE +  V
Sbjct: 249 DVQHPFQLSGQHMQNVLENENESKIGKFVEHMPNV 283


>ref|XP_003632423.1| PREDICTED: uncharacterized basic helix-loop-helix protein
           At1g06150-like [Vitis vinifera]
          Length = 749

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 65/227 (28%), Positives = 98/227 (43%), Gaps = 12/227 (5%)
 Frame = +1

Query: 13  SSKSKIPDDWIYQFAAGIKTIILVPVVPHGVLQLGSLETVAEDQAVVANVSDQFIAFQEL 192
           SS  +  D W  QF+AGIKTI++V VVPHGV+QLGSL+ V ED  +V+ + D F A Q+ 
Sbjct: 113 SSSFEYCDGWQAQFSAGIKTIVVVAVVPHGVVQLGSLQQVVEDLKLVSRIKDVFFALQD- 171

Query: 193 VGKFGSFSENLHCSTYSASPRMCTLVENVSADITMDGL----------KSDQFNEMFSIN 342
                     + CS  S+           ++DI  D L          + + ++ MF I 
Sbjct: 172 -SSVAYIPHPIQCSMKSSLAMSDISTRGSASDIVPDSLFNLDKGIHKERPNVWSPMFPIF 230

Query: 343 QPWHMFSTTNQITQLNDAENFEARYVEDVLKVSTSSITNDAKVL-PICSTEELDGPIPFS 519
              +  S   Q+  ++          +  L++S+S      K L P      L+G     
Sbjct: 231 GKHNDSSFIFQLPAIHQNRAVNMFNKDGGLELSSSQSDESTKFLQPRSENFVLEGQKQVQ 290

Query: 520 QSLSCNTTEME-SRFMSPFIQKQAHPFSHPNNDNVGAVREFAKNINS 657
             L  NT   E S +    +  + +  S+P N        F +NINS
Sbjct: 291 MKLISNTKREEASGWRDADVSSEHNDTSYPYN-------SFMENINS 330


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