BLASTX nr result

ID: Bupleurum21_contig00013361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013361
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280330.1| PREDICTED: LIMR family protein At5g01460 [Vi...   165   3e-39
ref|XP_002308217.1| predicted protein [Populus trichocarpa] gi|2...   164   5e-39
ref|XP_004148616.1| PREDICTED: LIMR family protein At3g08930-lik...   164   7e-39
ref|XP_002873012.1| LMBR1 integral membrane family protein [Arab...   162   2e-38
ref|NP_195766.1| LMBR1-like membrane protein [Arabidopsis thalia...   162   2e-38

>ref|XP_002280330.1| PREDICTED: LIMR family protein At5g01460 [Vitis vinifera]
           gi|297740207|emb|CBI30389.3| unnamed protein product
           [Vitis vinifera]
          Length = 509

 Score =  165 bits (418), Expect = 3e-39
 Identities = 85/119 (71%), Positives = 88/119 (73%)
 Frame = -3

Query: 358 LKKAADTLHQEERSGSKGRKWRKNTXXXXXXXXXXXXXXXXXXEMYPQGEKAETAWAMTV 179
           LKKAAD LHQEERSGSKGRKWRKN                   EMYPQGEKAET WA+TV
Sbjct: 266 LKKAADALHQEERSGSKGRKWRKNVKAVEKELLQLEDDVKALEEMYPQGEKAETTWALTV 325

Query: 178 LGYLAKXXXXXXXXXVSIAWIAHIVIYLLIDPPLSAFLNEVFIKLDDIWGLLGTAAFAF 2
           LGYLAK         VS+AWIAHIVIYLLIDPPLS FLNEVFIKLDD+WGLLGTAAFAF
Sbjct: 326 LGYLAKLVLGILGLIVSVAWIAHIVIYLLIDPPLSPFLNEVFIKLDDVWGLLGTAAFAF 384


>ref|XP_002308217.1| predicted protein [Populus trichocarpa] gi|222854193|gb|EEE91740.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score =  164 bits (416), Expect = 5e-39
 Identities = 83/119 (69%), Positives = 88/119 (73%)
 Frame = -3

Query: 358 LKKAADTLHQEERSGSKGRKWRKNTXXXXXXXXXXXXXXXXXXEMYPQGEKAETAWAMTV 179
           LKKAAD LHQEERSGSKGRKWRKN                   EMYPQGEKAETAWA+TV
Sbjct: 266 LKKAADALHQEERSGSKGRKWRKNVKSVEKELLQLEEDVKLLEEMYPQGEKAETAWALTV 325

Query: 178 LGYLAKXXXXXXXXXVSIAWIAHIVIYLLIDPPLSAFLNEVFIKLDDIWGLLGTAAFAF 2
           LGYLAK         VS+AW+AHI+IYLL+DPPLS FLNEVFIKLDDIWGLLGT AFAF
Sbjct: 326 LGYLAKLVLGILGLIVSVAWVAHIIIYLLVDPPLSPFLNEVFIKLDDIWGLLGTVAFAF 384


>ref|XP_004148616.1| PREDICTED: LIMR family protein At3g08930-like [Cucumis sativus]
           gi|449522716|ref|XP_004168372.1| PREDICTED: LIMR family
           protein At3g08930-like [Cucumis sativus]
          Length = 509

 Score =  164 bits (415), Expect = 7e-39
 Identities = 84/119 (70%), Positives = 88/119 (73%)
 Frame = -3

Query: 358 LKKAADTLHQEERSGSKGRKWRKNTXXXXXXXXXXXXXXXXXXEMYPQGEKAETAWAMTV 179
           LKKAAD LHQEERSGSKGRKWRKN                   EMYPQGEKAETAWA+TV
Sbjct: 266 LKKAADGLHQEERSGSKGRKWRKNVKAVEKELLQLEEDVKLLEEMYPQGEKAETAWALTV 325

Query: 178 LGYLAKXXXXXXXXXVSIAWIAHIVIYLLIDPPLSAFLNEVFIKLDDIWGLLGTAAFAF 2
           LGYLAK         VS+AW+ HIVIYLLIDPPLS FLNEVFIKLDD+WGLLGTAAFAF
Sbjct: 326 LGYLAKLVLGVLGLIVSVAWVVHIVIYLLIDPPLSPFLNEVFIKLDDVWGLLGTAAFAF 384


>ref|XP_002873012.1| LMBR1 integral membrane family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297318849|gb|EFH49271.1| LMBR1 integral
           membrane family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 509

 Score =  162 bits (411), Expect = 2e-38
 Identities = 82/119 (68%), Positives = 88/119 (73%)
 Frame = -3

Query: 358 LKKAADTLHQEERSGSKGRKWRKNTXXXXXXXXXXXXXXXXXXEMYPQGEKAETAWAMTV 179
           LKKAAD LHQEERSG+KGRKWRKN                   EMYPQGE+AETAWA TV
Sbjct: 266 LKKAADALHQEERSGAKGRKWRKNVKAVEKELLQLEEDVNLLEEMYPQGEQAETAWAFTV 325

Query: 178 LGYLAKXXXXXXXXXVSIAWIAHIVIYLLIDPPLSAFLNEVFIKLDDIWGLLGTAAFAF 2
           LGYLAK         VS+AWIAHI+IYLL+DPPLS FLNEVFIKLDD+WGLLGTAAFAF
Sbjct: 326 LGYLAKFILGILGLIVSVAWIAHIIIYLLVDPPLSPFLNEVFIKLDDVWGLLGTAAFAF 384


>ref|NP_195766.1| LMBR1-like membrane protein [Arabidopsis thaliana]
           gi|75181394|sp|Q9M028.1|LMBD2_ARATH RecName: Full=LIMR
           family protein At5g01460 gi|7320724|emb|CAB81929.1|
           putative protein [Arabidopsis thaliana]
           gi|18176296|gb|AAL60018.1| unknown protein [Arabidopsis
           thaliana] gi|20465353|gb|AAM20080.1| unknown protein
           [Arabidopsis thaliana] gi|332002964|gb|AED90347.1|
           LMBR1-like membrane protein [Arabidopsis thaliana]
          Length = 509

 Score =  162 bits (411), Expect = 2e-38
 Identities = 82/119 (68%), Positives = 88/119 (73%)
 Frame = -3

Query: 358 LKKAADTLHQEERSGSKGRKWRKNTXXXXXXXXXXXXXXXXXXEMYPQGEKAETAWAMTV 179
           LKKAAD LHQEERSG+KGRKWRKN                   EMYPQGE+AETAWA TV
Sbjct: 266 LKKAADALHQEERSGAKGRKWRKNVKAVEKELLQLEEDVNLLEEMYPQGEQAETAWAFTV 325

Query: 178 LGYLAKXXXXXXXXXVSIAWIAHIVIYLLIDPPLSAFLNEVFIKLDDIWGLLGTAAFAF 2
           LGYLAK         VS+AWIAHI+IYLL+DPPLS FLNEVFIKLDD+WGLLGTAAFAF
Sbjct: 326 LGYLAKFVLGILGLIVSVAWIAHIIIYLLVDPPLSPFLNEVFIKLDDVWGLLGTAAFAF 384


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