BLASTX nr result
ID: Bupleurum21_contig00013361
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00013361 (360 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280330.1| PREDICTED: LIMR family protein At5g01460 [Vi... 165 3e-39 ref|XP_002308217.1| predicted protein [Populus trichocarpa] gi|2... 164 5e-39 ref|XP_004148616.1| PREDICTED: LIMR family protein At3g08930-lik... 164 7e-39 ref|XP_002873012.1| LMBR1 integral membrane family protein [Arab... 162 2e-38 ref|NP_195766.1| LMBR1-like membrane protein [Arabidopsis thalia... 162 2e-38 >ref|XP_002280330.1| PREDICTED: LIMR family protein At5g01460 [Vitis vinifera] gi|297740207|emb|CBI30389.3| unnamed protein product [Vitis vinifera] Length = 509 Score = 165 bits (418), Expect = 3e-39 Identities = 85/119 (71%), Positives = 88/119 (73%) Frame = -3 Query: 358 LKKAADTLHQEERSGSKGRKWRKNTXXXXXXXXXXXXXXXXXXEMYPQGEKAETAWAMTV 179 LKKAAD LHQEERSGSKGRKWRKN EMYPQGEKAET WA+TV Sbjct: 266 LKKAADALHQEERSGSKGRKWRKNVKAVEKELLQLEDDVKALEEMYPQGEKAETTWALTV 325 Query: 178 LGYLAKXXXXXXXXXVSIAWIAHIVIYLLIDPPLSAFLNEVFIKLDDIWGLLGTAAFAF 2 LGYLAK VS+AWIAHIVIYLLIDPPLS FLNEVFIKLDD+WGLLGTAAFAF Sbjct: 326 LGYLAKLVLGILGLIVSVAWIAHIVIYLLIDPPLSPFLNEVFIKLDDVWGLLGTAAFAF 384 >ref|XP_002308217.1| predicted protein [Populus trichocarpa] gi|222854193|gb|EEE91740.1| predicted protein [Populus trichocarpa] Length = 509 Score = 164 bits (416), Expect = 5e-39 Identities = 83/119 (69%), Positives = 88/119 (73%) Frame = -3 Query: 358 LKKAADTLHQEERSGSKGRKWRKNTXXXXXXXXXXXXXXXXXXEMYPQGEKAETAWAMTV 179 LKKAAD LHQEERSGSKGRKWRKN EMYPQGEKAETAWA+TV Sbjct: 266 LKKAADALHQEERSGSKGRKWRKNVKSVEKELLQLEEDVKLLEEMYPQGEKAETAWALTV 325 Query: 178 LGYLAKXXXXXXXXXVSIAWIAHIVIYLLIDPPLSAFLNEVFIKLDDIWGLLGTAAFAF 2 LGYLAK VS+AW+AHI+IYLL+DPPLS FLNEVFIKLDDIWGLLGT AFAF Sbjct: 326 LGYLAKLVLGILGLIVSVAWVAHIIIYLLVDPPLSPFLNEVFIKLDDIWGLLGTVAFAF 384 >ref|XP_004148616.1| PREDICTED: LIMR family protein At3g08930-like [Cucumis sativus] gi|449522716|ref|XP_004168372.1| PREDICTED: LIMR family protein At3g08930-like [Cucumis sativus] Length = 509 Score = 164 bits (415), Expect = 7e-39 Identities = 84/119 (70%), Positives = 88/119 (73%) Frame = -3 Query: 358 LKKAADTLHQEERSGSKGRKWRKNTXXXXXXXXXXXXXXXXXXEMYPQGEKAETAWAMTV 179 LKKAAD LHQEERSGSKGRKWRKN EMYPQGEKAETAWA+TV Sbjct: 266 LKKAADGLHQEERSGSKGRKWRKNVKAVEKELLQLEEDVKLLEEMYPQGEKAETAWALTV 325 Query: 178 LGYLAKXXXXXXXXXVSIAWIAHIVIYLLIDPPLSAFLNEVFIKLDDIWGLLGTAAFAF 2 LGYLAK VS+AW+ HIVIYLLIDPPLS FLNEVFIKLDD+WGLLGTAAFAF Sbjct: 326 LGYLAKLVLGVLGLIVSVAWVVHIVIYLLIDPPLSPFLNEVFIKLDDVWGLLGTAAFAF 384 >ref|XP_002873012.1| LMBR1 integral membrane family protein [Arabidopsis lyrata subsp. lyrata] gi|297318849|gb|EFH49271.1| LMBR1 integral membrane family protein [Arabidopsis lyrata subsp. lyrata] Length = 509 Score = 162 bits (411), Expect = 2e-38 Identities = 82/119 (68%), Positives = 88/119 (73%) Frame = -3 Query: 358 LKKAADTLHQEERSGSKGRKWRKNTXXXXXXXXXXXXXXXXXXEMYPQGEKAETAWAMTV 179 LKKAAD LHQEERSG+KGRKWRKN EMYPQGE+AETAWA TV Sbjct: 266 LKKAADALHQEERSGAKGRKWRKNVKAVEKELLQLEEDVNLLEEMYPQGEQAETAWAFTV 325 Query: 178 LGYLAKXXXXXXXXXVSIAWIAHIVIYLLIDPPLSAFLNEVFIKLDDIWGLLGTAAFAF 2 LGYLAK VS+AWIAHI+IYLL+DPPLS FLNEVFIKLDD+WGLLGTAAFAF Sbjct: 326 LGYLAKFILGILGLIVSVAWIAHIIIYLLVDPPLSPFLNEVFIKLDDVWGLLGTAAFAF 384 >ref|NP_195766.1| LMBR1-like membrane protein [Arabidopsis thaliana] gi|75181394|sp|Q9M028.1|LMBD2_ARATH RecName: Full=LIMR family protein At5g01460 gi|7320724|emb|CAB81929.1| putative protein [Arabidopsis thaliana] gi|18176296|gb|AAL60018.1| unknown protein [Arabidopsis thaliana] gi|20465353|gb|AAM20080.1| unknown protein [Arabidopsis thaliana] gi|332002964|gb|AED90347.1| LMBR1-like membrane protein [Arabidopsis thaliana] Length = 509 Score = 162 bits (411), Expect = 2e-38 Identities = 82/119 (68%), Positives = 88/119 (73%) Frame = -3 Query: 358 LKKAADTLHQEERSGSKGRKWRKNTXXXXXXXXXXXXXXXXXXEMYPQGEKAETAWAMTV 179 LKKAAD LHQEERSG+KGRKWRKN EMYPQGE+AETAWA TV Sbjct: 266 LKKAADALHQEERSGAKGRKWRKNVKAVEKELLQLEEDVNLLEEMYPQGEQAETAWAFTV 325 Query: 178 LGYLAKXXXXXXXXXVSIAWIAHIVIYLLIDPPLSAFLNEVFIKLDDIWGLLGTAAFAF 2 LGYLAK VS+AWIAHI+IYLL+DPPLS FLNEVFIKLDD+WGLLGTAAFAF Sbjct: 326 LGYLAKFVLGILGLIVSVAWIAHIIIYLLVDPPLSPFLNEVFIKLDDVWGLLGTAAFAF 384