BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013345
         (1355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g...   459   e-126
ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g...   455   e-125
ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g...   454   e-125
ref|XP_003526723.1| PREDICTED: KH domain-containing protein At4g...   449   e-123
ref|XP_002521934.1| nucleic acid binding protein, putative [Rici...   442   e-122

>ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
            vinifera]
          Length = 661

 Score =  459 bits (1180), Expect = e-126
 Identities = 241/393 (61%), Positives = 292/393 (74%), Gaps = 7/393 (1%)
 Frame = -2

Query: 1159 MDRSRSKR-YYYDQDFDPEPMHRTKQRYXXXXXXN--HYAA-PHXXXXXXXXXXXRK--D 998
            MDRSRSKR Y+Y+QD+D E + RTK RY         HY    H            K  D
Sbjct: 1    MDRSRSKRGYFYEQDYDSETLGRTKPRYNNNNNHGGHHYNTNSHHRRGGAGAGRASKLQD 60

Query: 997  PNLMVTTSYRILCHDXXXXXXXXXXXXXXXXIRQHTGAWINMHELIPGDEERIIEISDTR 818
             ++MVTTSYRILCHD                IRQHTGAWIN+HELIPGDEERIIEISDTR
Sbjct: 61   SSVMVTTSYRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTR 120

Query: 817  RRDPDGRMPSFSPAQEALFLIHERILESDVGPAGGGYNFGDEDDEYGGMRGGANRVVTRL 638
            RRDP+GRMP FSPAQEALF+IH+RILESD G   G    GD+DD++G  RGG NRV TR+
Sbjct: 121  RRDPEGRMPQFSPAQEALFMIHDRILESDAGFGNGFGGNGDDDDDFGP-RGGGNRVATRM 179

Query: 637  VVSRMHVGSLLGKGGKIIEQMRMETRTHIRVLPRDHNIPRCVAMSEEIVQIHGDMNAVKN 458
            VVSRMHVG LLGKGGKIIEQMR+ET+T IR+LPRDHN+PRCV+MSEEIVQ+ GD+NAVKN
Sbjct: 180  VVSRMHVGCLLGKGGKIIEQMRIETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKN 239

Query: 457  AIAIISSRLRESQHRDRGNFHGR-APSPERFFPPDDDYMPHMNHSSLRGSMDSPSFESRL 281
            AIA ISSRLRESQHRDR +FHGR   SPERFFPPDDDY  HMN++  R  +D  SF SR+
Sbjct: 240  AIANISSRLRESQHRDRSHFHGRIQSSPERFFPPDDDY-SHMNNAPRRMPIDGNSFGSRV 298

Query: 280  SSGLNGPRGSRYSSHQSPFAAESEPMSMDDNEQSYSREDLIFQILCPIEKIDNIIGETDG 101
            S+GL G R + ++S  S +  ES    + DN Q +  ED++F+ILCP++K++ ++GE+DG
Sbjct: 299  STGLVGTRSNSFASRTSGYTLESGAAPIADNAQQFLGEDIVFRILCPVDKVECVVGESDG 358

Query: 100  IVDLLQNEIGVDVRIVDPVFGSDEQVIIISSEE 2
            I++LLQNEIGVDV++ D V GS+EQ+I+I+SEE
Sbjct: 359  IIELLQNEIGVDVKVADHVAGSNEQIIVITSEE 391


>ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
            sativus] gi|449517605|ref|XP_004165836.1| PREDICTED: KH
            domain-containing protein At4g18375-like [Cucumis
            sativus]
          Length = 666

 Score =  455 bits (1171), Expect = e-125
 Identities = 239/396 (60%), Positives = 293/396 (73%), Gaps = 10/396 (2%)
 Frame = -2

Query: 1159 MDRSRSKR-YYYD-QDFDPEPMHRTKQRYXXXXXXNHYAAP-HXXXXXXXXXXXRKDPNL 989
            M++SRSKR YYYD QDFD + M RT+ RY       HY    +            +D +L
Sbjct: 1    MEKSRSKRNYYYDHQDFDSDSMGRTRPRYNNN----HYPNNNYRHRGNAVRPSKPQDQSL 56

Query: 988  MVTTSYRILCHDXXXXXXXXXXXXXXXXIRQHTGAWINMHELIPGDEERIIEISDTRRRD 809
            MVTT+YRILCHD                IRQHTGAWIN+HEL+PGDEERIIEISDTRRRD
Sbjct: 57   MVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRD 116

Query: 808  PDGRMPSFSPAQEALFLIHERILESDVGPAGGGYNFG--DEDDEYGGMRGGAN-----RV 650
            P+GRMPSFSPAQEALFLIHERILES++ P   G  +G  DE+D+YGG+RGG       RV
Sbjct: 117  PEGRMPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGGGGGCGGRV 176

Query: 649  VTRLVVSRMHVGSLLGKGGKIIEQMRMETRTHIRVLPRDHNIPRCVAMSEEIVQIHGDMN 470
             TRLVVSRMHVG LLGKGGKIIEQMRMET+T IR+LPRDHN+PRC++MSEEIVQI GD N
Sbjct: 177  ATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTN 236

Query: 469  AVKNAIAIISSRLRESQHRDRGNFHGRAPSPERFFPPDDDYMPHMNHSSLRGSMDSPSFE 290
            AVK AIAI+SSRLRESQHRDR +FHGR  SPER FPP+DDY+P   H++ R  MD   F 
Sbjct: 237  AVKKAIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPEDDYVP---HNARRLPMDGRPFR 293

Query: 289  SRLSSGLNGPRGSRYSSHQSPFAAESEPMSMDDNEQSYSREDLIFQILCPIEKIDNIIGE 110
             R+S+  +  RG+ YSS QS F  E     ++DN   +  EDL+F+ILCPIEK+D++IGE
Sbjct: 294  PRMSA--SNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVDSVIGE 351

Query: 109  TDGIVDLLQNEIGVDVRIVDPVFGSDEQVIIISSEE 2
            ++GI++LL+N++GVD+++ DPV GS+EQ++IISS+E
Sbjct: 352  SNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDE 387



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 51/164 (31%), Positives = 85/164 (51%)
 Frame = -2

Query: 901 RQHTGAWINMHELIPGDEERIIEISDTRRRDPDGRMPSFSPAQEALFLIHERILESDVGP 722
           R   G  I + + + G  E+I+ IS     D +       PAQEAL  I  RI+  D+ P
Sbjct: 360 RNDVGVDIKVSDPVTGSNEQILIISSDEGPDDE-----LFPAQEALLHIQTRIV--DLVP 412

Query: 721 AGGGYNFGDEDDEYGGMRGGANRVVTRLVVSRMHVGSLLGKGGKIIEQMRMETRTHIRVL 542
                     D E        N V TRL+V    +G L G+ G ++E  R+ T  ++ ++
Sbjct: 413 ----------DKE--------NIVTTRLLVPSSDIGCLEGRDGSLLEMKRL-TGANVHIV 453

Query: 541 PRDHNIPRCVAMSEEIVQIHGDMNAVKNAIAIISSRLRESQHRD 410
           PR+ ++P  V+ ++E+VQI GD+ A ++A+  ++SRLR   +++
Sbjct: 454 PRE-DLPMFVSGADELVQIIGDIKAARDALVELTSRLRNCLYKE 496


>ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 644

 Score =  454 bits (1169), Expect = e-125
 Identities = 240/392 (61%), Positives = 286/392 (72%), Gaps = 6/392 (1%)
 Frame = -2

Query: 1159 MDRSRSKR-YYYDQDFDPEPMHRTKQRYXXXXXXNHYAAP----HXXXXXXXXXXXRKDP 995
            M+RSRSKR YYYDQD+D E + RT+ RY       HY+      H           ++D 
Sbjct: 1    MERSRSKRNYYYDQDYDSETLARTRPRYNH-----HYSTGGNHRHRGGGAARHAKTQQDS 55

Query: 994  NLMVTTSYRILCHDXXXXXXXXXXXXXXXXIRQHTGAWINMHELIPGDEERIIEISDTRR 815
             L VTTSYRILCHD                IRQHTGAWIN+HEL+PGDEERIIEISDTRR
Sbjct: 56   PLTVTTSYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIEISDTRR 115

Query: 814  RDPDGRMPSFSPAQEALFLIHERILESDVGPAGGGYNFGDEDDEYGGMRGGANRVVTRLV 635
            RDP+GRMPSFSPAQEAL LIHERILESD       +   +ED+EYGG  GG +R+ TRLV
Sbjct: 116  RDPEGRMPSFSPAQEALLLIHERILESDAA-----FGVAEEDEEYGGRGGGRDRIATRLV 170

Query: 634  VSRMHVGSLLGKGGKIIEQMRMETRTHIRVLPRDHNIPRCVAMSEEIVQIHGDMNAVKNA 455
            VSRMHVG LLGKGGKIIEQMRMET+T IR+LPRDHN+PRCV+MSEEIVQ+ G++NAVKNA
Sbjct: 171  VSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVVGNVNAVKNA 230

Query: 454  IAIISSRLRESQHRDRGNFHGRAPSPERFFPPDDDYMPHMNHSSLRGSMDSPSFESRLSS 275
            + IISSRLRESQHRDR +FHGR  SPERFF PDDDY+PH+   S R S+D  SF SR S+
Sbjct: 231  LVIISSRLRESQHRDRSHFHGRVHSPERFFSPDDDYVPHVTSGSRRSSVDGASFGSRGSN 290

Query: 274  GLNGPRGSRYSSHQS-PFAAESEPMSMDDNEQSYSREDLIFQILCPIEKIDNIIGETDGI 98
                   SR ++H S  +A E     + D+ Q +  E+L+F+ILCPIEK+D IIGE++GI
Sbjct: 291  -----TNSRNNNHPSLNYAMEPGAAPVVDDAQGFYGEELVFRILCPIEKVDRIIGESEGI 345

Query: 97   VDLLQNEIGVDVRIVDPVFGSDEQVIIISSEE 2
            V+ LQNE+GVDV++ DPV GSDEQ+III+SEE
Sbjct: 346  VEFLQNEVGVDVKVTDPVGGSDEQIIIITSEE 377



 Score = 70.9 bits (172), Expect = 7e-10
 Identities = 57/188 (30%), Positives = 91/188 (48%)
 Frame = -2

Query: 973 YRILCHDXXXXXXXXXXXXXXXXIRQHTGAWINMHELIPGDEERIIEISDTRRRDPDGRM 794
           +RILC                  ++   G  + + + + G +E+II I  T    PD  +
Sbjct: 326 FRILCPIEKVDRIIGESEGIVEFLQNEVGVDVKVTDPVGGSDEQIIII--TSEEGPDDEL 383

Query: 793 PSFSPAQEALFLIHERILESDVGPAGGGYNFGDEDDEYGGMRGGANRVVTRLVVSRMHVG 614
               PAQEAL  +  RI++  +          D+D          N + TRLVV    + 
Sbjct: 384 ---FPAQEALLHVQTRIVDLVL----------DKD----------NTITTRLVVPSSEIE 420

Query: 613 SLLGKGGKIIEQMRMETRTHIRVLPRDHNIPRCVAMSEEIVQIHGDMNAVKNAIAIISSR 434
            L GK   + E  R+ T  +I++LPRD  +P CVA ++E+VQI G++ A ++A+  ++SR
Sbjct: 421 CLDGKDVSLSEIRRL-TGANIQILPRDE-LPLCVAKTDELVQIVGEIKAARDAVVEVTSR 478

Query: 433 LRESQHRD 410
           LR   +RD
Sbjct: 479 LRSYLYRD 486


>ref|XP_003526723.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 647

 Score =  449 bits (1154), Expect = e-123
 Identities = 240/395 (60%), Positives = 285/395 (72%), Gaps = 9/395 (2%)
 Frame = -2

Query: 1159 MDRSRSKR-YYYDQDFDPEPMHRTKQRYXXXXXXNHYAAP----HXXXXXXXXXXXRKDP 995
            M+RSRSKR YYYDQD+D E + RT+ RY       HY       H           ++D 
Sbjct: 1    MERSRSKRNYYYDQDYDSETLARTRPRYNH-----HYTTAGNQRHRGGGAARHAKTQQDS 55

Query: 994  NLMVTTSYRILCHDXXXXXXXXXXXXXXXXIRQHTGAWINMHELIPGDEERIIEISDTRR 815
             L VTTSYRILCHD                IRQHTGAWIN+HEL+PGDEERIIEISDTRR
Sbjct: 56   PLTVTTSYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIEISDTRR 115

Query: 814  RDPDGRMPSFSPAQEALFLIHERILESDVGPAGGGYNFGDEDDEYGGMRGGA---NRVVT 644
            RDP+GRMPSFSPAQEAL LIHERILESD       +   ++D+EYG  RGG    +RV T
Sbjct: 116  RDPEGRMPSFSPAQEALLLIHERILESDAA-----FGVAEDDEEYGAGRGGGAGRDRVAT 170

Query: 643  RLVVSRMHVGSLLGKGGKIIEQMRMETRTHIRVLPRDHNIPRCVAMSEEIVQIHGDMNAV 464
            RLVVSRMHVG LLGKGGKIIEQMRMET+T IR+LPRDHN+PRCV+MSEEIVQ+ GD+NAV
Sbjct: 171  RLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAV 230

Query: 463  KNAIAIISSRLRESQHRDRGNFHGRAPSPERFFPPDDDYMPHMNHSSLRGSMDSPSFESR 284
            KNA+ IISSRLRESQHRDR +FHGR  SPERFF PDDDY+PH+   S R S+D  SF SR
Sbjct: 231  KNALVIISSRLRESQHRDRSHFHGRVHSPERFFSPDDDYVPHVTSGSRRSSVDGASFGSR 290

Query: 283  LSSGLNGPRGSRYSSHQS-PFAAESEPMSMDDNEQSYSREDLIFQILCPIEKIDNIIGET 107
             S+       SR ++H S  +A E     + D+ Q +  E+L+F+ILCP+EK+D IIGE+
Sbjct: 291  GSN-----TNSRNNNHPSLSYAMEPGAAPVVDDAQGFYGEELVFRILCPVEKVDLIIGES 345

Query: 106  DGIVDLLQNEIGVDVRIVDPVFGSDEQVIIISSEE 2
            DGIV+ LQ+E+GVDV++ DPV GSDEQ+III+SEE
Sbjct: 346  DGIVEFLQSEVGVDVKVTDPVGGSDEQIIIITSEE 380



 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 62/199 (31%), Positives = 96/199 (48%)
 Frame = -2

Query: 973 YRILCHDXXXXXXXXXXXXXXXXIRQHTGAWINMHELIPGDEERIIEISDTRRRDPDGRM 794
           +RILC                  ++   G  + + + + G +E+II I  T    PD  +
Sbjct: 329 FRILCPVEKVDLIIGESDGIVEFLQSEVGVDVKVTDPVGGSDEQIIII--TSEEGPDDEL 386

Query: 793 PSFSPAQEALFLIHERILESDVGPAGGGYNFGDEDDEYGGMRGGANRVVTRLVVSRMHVG 614
               PAQEAL  I  RI++  +          D+D          N + TRLVV    + 
Sbjct: 387 ---FPAQEALLHIQTRIVDLVL----------DKD----------NTITTRLVVPSSEIE 423

Query: 613 SLLGKGGKIIEQMRMETRTHIRVLPRDHNIPRCVAMSEEIVQIHGDMNAVKNAIAIISSR 434
            L GK   + E  R+ T  +I++LPRD ++P CVA ++E+VQI G++ A ++A+  ++SR
Sbjct: 424 CLDGKDVSLSEIRRL-TGANIQILPRD-DLPLCVAKTDELVQIVGEIKAARDAVVEVTSR 481

Query: 433 LRESQHRDRGNFHGRAPSP 377
           LR   +RD   F  R P P
Sbjct: 482 LRSYLYRD---FFQRDPIP 497


>ref|XP_002521934.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223538859|gb|EEF40458.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 704

 Score =  442 bits (1138), Expect = e-122
 Identities = 247/406 (60%), Positives = 293/406 (72%), Gaps = 20/406 (4%)
 Frame = -2

Query: 1159 MDRSRSKR-YYYD--QDFDPE-PMHRTKQRYXXXXXXNH----------YAAPHXXXXXX 1022
            M+RSRSKR YYYD  QD+D E  M RTK RY       +          Y          
Sbjct: 1    MERSRSKRNYYYDHQQDYDNEITMSRTKPRYNNNTNNTNNNHYFPNNNRYRGGSNNSNNN 60

Query: 1021 XXXXXRKDPNLMVTTSYRILCHDXXXXXXXXXXXXXXXXIRQHTGAWINMHELIPGDEER 842
                 ++D +LMVTTSYRILCHD                IRQHTGAWIN+HELIPGDEER
Sbjct: 61   RPSKPQQDNSLMVTTSYRILCHDMKAGGVIGKSGTIIKSIRQHTGAWINVHELIPGDEER 120

Query: 841  IIEISDTRRRDPDGRMPSFSPAQEALFLIHERILESDVGPAGGGYNFGDEDDEYGG--MR 668
            IIEISDTRRRDP+GRMP+FSPAQEALFLIH+RILESD      G ++ +E+DEYGG  + 
Sbjct: 121  IIEISDTRRRDPEGRMPAFSPAQEALFLIHDRILESD---GQFGMSYANEEDEYGGRGIN 177

Query: 667  GGANRVVTRLVVSRMHVGSLLGKGGKIIEQMRMETRTHIRVLPRDHNIPRCVAMSEEIVQ 488
               NRV TRLVVSRMHVG LLGKGGKIIEQMR+ET+T IR+LPRDH +PRCV+MSEEIVQ
Sbjct: 178  NSNNRVATRLVVSRMHVGCLLGKGGKIIEQMRIETKTQIRILPRDHTLPRCVSMSEEIVQ 237

Query: 487  IHGDMNAVKNAIAIISSRLRESQHRDR--GNFHGRAPSPERFFPPDDDYMPHMNHSSLRG 314
            + GD+NAVKNAIAIISSRLRESQHRDR  GNFHGR  SPERFF PDDDY+PHMN++  R 
Sbjct: 238  VVGDVNAVKNAIAIISSRLRESQHRDRSHGNFHGRMHSPERFF-PDDDYVPHMNNTGRRS 296

Query: 313  SMDSPSFESRLSSGLNGP--RGSRYSSHQSPFAAESEPMSMDDNEQSYSREDLIFQILCP 140
            S+D PSF SR S    GP  R S YSS Q  +  E+    + D+ Q +  +DL+F++LCP
Sbjct: 297  SIDGPSFGSRAS----GPNYRNSNYSSRQYGYNVEA-GAPVADSAQPFYGDDLVFRMLCP 351

Query: 139  IEKIDNIIGETDGIVDLLQNEIGVDVRIVDPVFGSDEQVIIISSEE 2
             +K++ ++GE+DGI+DLLQN+IGVDV++ DPV GSDEQ+IIISSEE
Sbjct: 352  ADKVNKVVGESDGILDLLQNDIGVDVKVSDPVSGSDEQMIIISSEE 397



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 15/196 (7%)
 Frame = -2

Query: 889 GAWINMHELIPGDEERIIEISDTRRRDPDGRMPSFSPAQEALFLIHERILESDVGPAGGG 710
           G  + + + + G +E++I IS     D +       PAQEAL  I   I+  D+ P    
Sbjct: 374 GVDVKVSDPVSGSDEQMIIISSEEGPDDE-----LFPAQEALLHIQTHII--DLVP---- 422

Query: 709 YNFGDEDDEYGGMRGGANRVVTRLVVSRMHVGSLLGKGGKIIEQMRMETRTHIRVLPRDH 530
               D D          N + T+L+VS   +G L G+ G + E  R+ T   I++LPR+ 
Sbjct: 423 ----DSD----------NIIKTKLIVSSGEIGCLEGRDGSLSEMERL-TGAKIQILPRE- 466

Query: 529 NIPRCVAMSEEIVQIHGDMNAVKNAIAIISSRLRESQHRD--------------RGNFHG 392
            +P CV+ ++E+VQI G++ A ++A+  ++SRLR   +++               GN  G
Sbjct: 467 KLPACVSEADELVQIEGEIKAARDALVEVTSRLRSYLYKEYFQKDTPPPISVPSTGNALG 526

Query: 391 -RAPSPERFFPPDDDY 347
             A SP    PP D +
Sbjct: 527 MEAASPNNINPPRDGH 542