BLASTX nr result

ID: Bupleurum21_contig00013341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013341
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149865.1| PREDICTED: transcription factor DIVARICATA-l...   162   4e-38
ref|XP_002513126.1| DNA binding protein, putative [Ricinus commu...   155   5e-36
ref|XP_002306366.1| predicted protein [Populus trichocarpa] gi|2...   152   5e-35
ref|XP_002267157.2| PREDICTED: uncharacterized protein LOC100268...   151   1e-34
emb|CAN61550.1| hypothetical protein VITISV_028268 [Vitis vinifera]   151   1e-34

>ref|XP_004149865.1| PREDICTED: transcription factor DIVARICATA-like [Cucumis sativus]
           gi|449531095|ref|XP_004172523.1| PREDICTED:
           transcription factor DIVARICATA-like [Cucumis sativus]
          Length = 295

 Score =  162 bits (410), Expect = 4e-38
 Identities = 80/116 (68%), Positives = 87/116 (75%)
 Frame = -1

Query: 620 RSSIHDITNVNNSDTSASQVAITGQTNGVSGGSSGKPTKQLSQSIVTSSGVGMYGGTTIG 441
           RSSIHDIT+V N D SA+Q  ITGQ NG     SGKPTKQ  QS     GVGMYGG T+G
Sbjct: 179 RSSIHDITSVANGDISAAQGPITGQANGSGAAPSGKPTKQPPQSAAGPPGVGMYGGPTMG 238

Query: 440 QPVGGHLISAVGTPVILPQPAHMAYGARTPVPGQMVQGAPVNMGPIAYPVPHPSAH 273
           QPVGG L+SAVGTPV LP PAHMAYG R PVPG +V GAPVNMGP+ YP+P  SAH
Sbjct: 239 QPVGGPLVSAVGTPVSLPAPAHMAYGVRAPVPGTVVPGAPVNMGPMTYPMPPTSAH 294


>ref|XP_002513126.1| DNA binding protein, putative [Ricinus communis]
           gi|223548137|gb|EEF49629.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 295

 Score =  155 bits (392), Expect = 5e-36
 Identities = 78/117 (66%), Positives = 88/117 (75%), Gaps = 1/117 (0%)
 Frame = -1

Query: 620 RSSIHDITNVNNSDTSASQVAITGQTNG-VSGGSSGKPTKQLSQSIVTSSGVGMYGGTTI 444
           RSSIHDIT+V N D SA Q  ITGQTNG   GGS+GK TK   Q    S GVG+YG  TI
Sbjct: 178 RSSIHDITSVGNGDISAPQGPITGQTNGSAGGGSAGKATKHPPQHPAGSPGVGVYGSPTI 237

Query: 443 GQPVGGHLISAVGTPVILPQPAHMAYGARTPVPGQMVQGAPVNMGPIAYPVPHPSAH 273
           GQP+GG L+SAVGTPV LP PAHMAYG R PVPG +V GAP+NMGP+AYP+P  +AH
Sbjct: 238 GQPIGGPLVSAVGTPVNLPAPAHMAYGIRAPVPGTVVPGAPMNMGPMAYPMPPTTAH 294


>ref|XP_002306366.1| predicted protein [Populus trichocarpa] gi|222855815|gb|EEE93362.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score =  152 bits (384), Expect = 5e-35
 Identities = 74/116 (63%), Positives = 85/116 (73%)
 Frame = -1

Query: 620 RSSIHDITNVNNSDTSASQVAITGQTNGVSGGSSGKPTKQLSQSIVTSSGVGMYGGTTIG 441
           RSSIHDIT+V N D +A Q  ITGQTNG + GSSGK  KQ     V   GVG+YG  TIG
Sbjct: 179 RSSIHDITSVGNGDVAAPQGPITGQTNGSAAGSSGKAAKQPPAQPVGPPGVGIYGPPTIG 238

Query: 440 QPVGGHLISAVGTPVILPQPAHMAYGARTPVPGQMVQGAPVNMGPIAYPVPHPSAH 273
           QP+GG L+SAVGTPV LP PAHMAYG R PVPG +V GAP+NM P+ YP+PH + H
Sbjct: 239 QPIGGPLVSAVGTPVNLPAPAHMAYGVRAPVPGTVVPGAPMNMVPMTYPMPHTTTH 294


>ref|XP_002267157.2| PREDICTED: uncharacterized protein LOC100268113 [Vitis vinifera]
          Length = 295

 Score =  151 bits (381), Expect = 1e-34
 Identities = 78/118 (66%), Positives = 85/118 (72%), Gaps = 2/118 (1%)
 Frame = -1

Query: 620 RSSIHDITNVNNSDTSASQVAITGQTNG-VSGGSSGKPTKQLSQSIV-TSSGVGMYGGTT 447
           RSSIHDIT+V N D S  Q  ITGQTNG  SG SSGK TK   Q       GVGMYG TT
Sbjct: 177 RSSIHDITSVGNGDISVPQGPITGQTNGSASGASSGKSTKPTPQPPAGPPPGVGMYGSTT 236

Query: 446 IGQPVGGHLISAVGTPVILPQPAHMAYGARTPVPGQMVQGAPVNMGPIAYPVPHPSAH 273
           IGQP+GG L+SAVGTPV L  P HMAYG R PVPG +V GAP+NMGP+ YP+PH SAH
Sbjct: 237 IGQPIGGPLVSAVGTPVNLSAPPHMAYGVRAPVPGAVVPGAPMNMGPMTYPMPHTSAH 294


>emb|CAN61550.1| hypothetical protein VITISV_028268 [Vitis vinifera]
          Length = 467

 Score =  151 bits (381), Expect = 1e-34
 Identities = 78/118 (66%), Positives = 85/118 (72%), Gaps = 2/118 (1%)
 Frame = -1

Query: 620 RSSIHDITNVNNSDTSASQVAITGQTNG-VSGGSSGKPTKQLSQSIV-TSSGVGMYGGTT 447
           RSSIHDIT+V N D S  Q  ITGQTNG  SG SSGK TK   Q       GVGMYG TT
Sbjct: 328 RSSIHDITSVGNGDISVPQGPITGQTNGSASGASSGKSTKPTPQPPAGPPPGVGMYGSTT 387

Query: 446 IGQPVGGHLISAVGTPVILPQPAHMAYGARTPVPGQMVQGAPVNMGPIAYPVPHPSAH 273
           IGQP+GG L+SAVGTPV L  P HMAYG R PVPG +V GAP+NMGP+ YP+PH SAH
Sbjct: 388 IGQPIGGPLVSAVGTPVNLSAPPHMAYGVRAPVPGAVVPGAPMNMGPMTYPMPHTSAH 445


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