BLASTX nr result

ID: Bupleurum21_contig00013340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013340
         (896 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   464   e-129
ref|XP_003531616.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   460   e-127
ref|XP_002527405.1| Protein SEY1, putative [Ricinus communis] gi...   457   e-126
emb|CBI35950.3| unnamed protein product [Vitis vinifera]              456   e-126
ref|XP_002279673.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   455   e-126

>ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine
           max]
          Length = 808

 Score =  464 bits (1195), Expect = e-129
 Identities = 231/264 (87%), Positives = 238/264 (90%)
 Frame = +3

Query: 105 MENDGDCCSTHLIDGDGTFNASGLETFMKTVRLSECGLSYAVVSIMGPQSSGKSTLLNHL 284
           M N   CCST LIDGDGTFN  G+E FMK V+L+ECGLSYAVVSIMGPQSSGKSTLLNHL
Sbjct: 1   MANSETCCSTQLIDGDGTFNVFGVENFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNHL 60

Query: 285 FRTNFREMDAFKGRSQTTKGIWMARCTGLEPCTIVMDLEGTDGRERGEDDTAFEKQSALF 464
           F TNFREMDAFKGRSQTTKGIWMARC G+EPCT+VMDLEGTDGRERGEDDTAFEKQSALF
Sbjct: 61  FGTNFREMDAFKGRSQTTKGIWMARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALF 120

Query: 465 ALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLEN 644
           ALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTL+FVIRDKTRTPLEN
Sbjct: 121 ALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTRTPLEN 180

Query: 645 LEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALXXXXXXXXXXXXXVAGLRQRFY 824
           LEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVAL             VA LRQRF+
Sbjct: 181 LEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALSSYEEKEEQFKDQVASLRQRFH 240

Query: 825 QSIAPGGLAGDRRGVVPASGFSFS 896
            SIAPGGLAGDRRGVVPASGFSFS
Sbjct: 241 HSIAPGGLAGDRRGVVPASGFSFS 264


>ref|XP_003531616.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine
           max]
          Length = 808

 Score =  460 bits (1183), Expect = e-127
 Identities = 229/264 (86%), Positives = 239/264 (90%)
 Frame = +3

Query: 105 MENDGDCCSTHLIDGDGTFNASGLETFMKTVRLSECGLSYAVVSIMGPQSSGKSTLLNHL 284
           M N   CCST LIDGDGTFN SGLE+FMK V+L+ECGLSYAVVSIMGPQSSGKSTLLN+L
Sbjct: 1   MANSETCCSTQLIDGDGTFNVSGLESFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNNL 60

Query: 285 FRTNFREMDAFKGRSQTTKGIWMARCTGLEPCTIVMDLEGTDGRERGEDDTAFEKQSALF 464
           F TNFREMDAFKGRSQTTKGIWMARC  +EPCT+VMDLEGTDGRERGEDDTAFEKQSALF
Sbjct: 61  FGTNFREMDAFKGRSQTTKGIWMARCADIEPCTLVMDLEGTDGRERGEDDTAFEKQSALF 120

Query: 465 ALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLEN 644
           ALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTL+FVIRDKTRTPLEN
Sbjct: 121 ALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTRTPLEN 180

Query: 645 LEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALXXXXXXXXXXXXXVAGLRQRFY 824
           LEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVAL             VA L++RF+
Sbjct: 181 LEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALSSYEEKEEQFKEQVASLQKRFH 240

Query: 825 QSIAPGGLAGDRRGVVPASGFSFS 896
            SIAPGGLAGDRRGVVPASGFSFS
Sbjct: 241 HSIAPGGLAGDRRGVVPASGFSFS 264


>ref|XP_002527405.1| Protein SEY1, putative [Ricinus communis]
           gi|223533215|gb|EEF34971.1| Protein SEY1, putative
           [Ricinus communis]
          Length = 813

 Score =  457 bits (1175), Expect = e-126
 Identities = 228/264 (86%), Positives = 237/264 (89%)
 Frame = +3

Query: 105 MENDGDCCSTHLIDGDGTFNASGLETFMKTVRLSECGLSYAVVSIMGPQSSGKSTLLNHL 284
           M N  + CST LIDGDGTFNA+GLE F K VRL ECGLSYAVVSIMGPQSSGKSTLLN+L
Sbjct: 1   MANSEESCSTQLIDGDGTFNAAGLEHFTKEVRLGECGLSYAVVSIMGPQSSGKSTLLNNL 60

Query: 285 FRTNFREMDAFKGRSQTTKGIWMARCTGLEPCTIVMDLEGTDGRERGEDDTAFEKQSALF 464
           F TNFREMDAF+GRSQTTKGIW+ARC G+EPCT+VMDLEGTDGRERGEDDTAFEKQSALF
Sbjct: 61  FGTNFREMDAFRGRSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALF 120

Query: 465 ALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLEN 644
           ALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLEN
Sbjct: 121 ALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLEN 180

Query: 645 LEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALXXXXXXXXXXXXXVAGLRQRFY 824
           LEPVLREDIQKIWD+VPKPQ HKETPLSEFFNVEVVAL             VA LRQRF+
Sbjct: 181 LEPVLREDIQKIWDAVPKPQEHKETPLSEFFNVEVVALSSYEEKEEQFKEQVASLRQRFF 240

Query: 825 QSIAPGGLAGDRRGVVPASGFSFS 896
            SIAPGGLAGDRRGVVPASGFSFS
Sbjct: 241 HSIAPGGLAGDRRGVVPASGFSFS 264


>emb|CBI35950.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score =  456 bits (1173), Expect = e-126
 Identities = 226/264 (85%), Positives = 236/264 (89%)
 Frame = +3

Query: 105  MENDGDCCSTHLIDGDGTFNASGLETFMKTVRLSECGLSYAVVSIMGPQSSGKSTLLNHL 284
            M N  +CCST LIDGDG FN  GLE FMK V+L+ECGLSYAVVSIMGPQSSGKSTLLNHL
Sbjct: 217  MGNADECCSTQLIDGDGMFNVHGLENFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNHL 276

Query: 285  FRTNFREMDAFKGRSQTTKGIWMARCTGLEPCTIVMDLEGTDGRERGEDDTAFEKQSALF 464
            F TNFREMDAF+GRSQTTKGIW+ARC  +EPCT+VMDLEGTDGRERGEDDTAFEKQSALF
Sbjct: 277  FGTNFREMDAFRGRSQTTKGIWLARCADIEPCTLVMDLEGTDGRERGEDDTAFEKQSALF 336

Query: 465  ALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLEN 644
            ALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLEN
Sbjct: 337  ALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLEN 396

Query: 645  LEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALXXXXXXXXXXXXXVAGLRQRFY 824
            LEPVLREDIQKIWDSVPKPQAHKETPLSEFFNV+V AL             VA L+QRF+
Sbjct: 397  LEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVQVTALSSYEEKEELFKEQVASLKQRFH 456

Query: 825  QSIAPGGLAGDRRGVVPASGFSFS 896
            QSIAPGGLAGDRR VVPASGFSFS
Sbjct: 457  QSIAPGGLAGDRRAVVPASGFSFS 480


>ref|XP_002279673.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Vitis
           vinifera]
          Length = 871

 Score =  455 bits (1171), Expect = e-126
 Identities = 225/264 (85%), Positives = 236/264 (89%)
 Frame = +3

Query: 105 MENDGDCCSTHLIDGDGTFNASGLETFMKTVRLSECGLSYAVVSIMGPQSSGKSTLLNHL 284
           + N  +CCST LIDGDG FN  GLE FMK V+L+ECGLSYAVVSIMGPQSSGKSTLLNHL
Sbjct: 59  ISNADECCSTQLIDGDGMFNVHGLENFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNHL 118

Query: 285 FRTNFREMDAFKGRSQTTKGIWMARCTGLEPCTIVMDLEGTDGRERGEDDTAFEKQSALF 464
           F TNFREMDAF+GRSQTTKGIW+ARC  +EPCT+VMDLEGTDGRERGEDDTAFEKQSALF
Sbjct: 119 FGTNFREMDAFRGRSQTTKGIWLARCADIEPCTLVMDLEGTDGRERGEDDTAFEKQSALF 178

Query: 465 ALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLEN 644
           ALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLEN
Sbjct: 179 ALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLEN 238

Query: 645 LEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALXXXXXXXXXXXXXVAGLRQRFY 824
           LEPVLREDIQKIWDSVPKPQAHKETPLSEFFNV+V AL             VA L+QRF+
Sbjct: 239 LEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVQVTALSSYEEKEELFKEQVASLKQRFH 298

Query: 825 QSIAPGGLAGDRRGVVPASGFSFS 896
           QSIAPGGLAGDRR VVPASGFSFS
Sbjct: 299 QSIAPGGLAGDRRAVVPASGFSFS 322


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