BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013253
         (1642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containin...   405   e-110
ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containin...   394   e-107
ref|XP_002511264.1| nucleic acid binding protein, putative [Rici...   377   e-102
ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containin...   374   e-101
ref|XP_003638527.1| Zinc finger CCCH domain-containing protein [...   361   3e-97

>ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 1
            [Vitis vinifera] gi|297733636|emb|CBI14883.3| unnamed
            protein product [Vitis vinifera]
          Length = 484

 Score =  405 bits (1040), Expect = e-110
 Identities = 199/389 (51%), Positives = 255/389 (65%), Gaps = 21/389 (5%)
 Frame = +1

Query: 154  EDDEKQQYINEYEDEMNGKEQYNEELDWYGNVEGDLVALNNGHSENCYYPLRPDAEDCSF 333
            E+ E+++  +E  D     +  ++E +   N+E D  A  +  S    YP+RPDA DCSF
Sbjct: 79   EEREEEKEEDEESDSNGEVKASDDEEEQCENLE-DESAAKDDKSARFQYPVRPDAVDCSF 137

Query: 334  YMKTGSCKFRMTCKFNHPLRRKDQAARDTYKQMEENS--DMPGRTKCKYHLTSDGCKYGK 507
            Y++TG+CKF   CKFNHP+RRK+Q A++  K+ E+    + PG+T+CKY+L + GCK+GK
Sbjct: 138  YLRTGTCKFGSNCKFNHPIRRKNQVAKEKVKEKEKEEFPERPGQTECKYYLRTGGCKFGK 197

Query: 508  ACRYNHGRGKPAVAPILEFNFLGLPIRMGEKECPYYMRTGSCKYGSTCRFNHPDPTVA-- 681
            ACRYNH + KP+  P+LE NFLGLPIRMGEKECPYYMRTGSCKYG+ CRFNHPDPT A  
Sbjct: 198  ACRYNHTKAKPSAVPVLELNFLGLPIRMGEKECPYYMRTGSCKYGANCRFNHPDPTAAGG 257

Query: 682  -------XXXXXXXXXXXXKDTFSSWSSAKRLNETAYSVPLIYPPSP-TAPPNGEWNGYQ 837
                               +   +SWSS + LNE A  VP+++ P+    PPN EWNGYQ
Sbjct: 258  YESPSGYGNGGSVPLQGASQSNMASWSSPRALNEPAPFVPIMFSPTQGVPPPNPEWNGYQ 317

Query: 838  TPAY--PTSDRKLPTPPAFAMNCLPTDGNFYA--PPRKQPIVEEFPERPGQPECSYYLRT 1005
             P Y  P  +R +  PPAF +N   TD N Y     ++Q ++E+FPERPGQPECSY+L+T
Sbjct: 318  APLYPPPPPERSMHPPPAFVINNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYFLKT 377

Query: 1006 GNCKYRSTCKYHHPKN---WKAFVTLNDHGLPLRPGQSICAHYSHYGLCKFGPACKHDHS 1176
            G+CK+R+ CKYHHPKN        TL+D GLPLRP Q+IC HY+ YG+CKFGPACK DH 
Sbjct: 378  GDCKFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTHYNRYGICKFGPACKFDHP 437

Query: 1177 VRNGTSAS--SNRSDQGQPPRYGKLGEAD 1257
            V  G SAS  S  S Q QPP +G    AD
Sbjct: 438  VNYGNSASAPSAESGQDQPPPFGGSVTAD 466


>ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 2
            [Vitis vinifera]
          Length = 481

 Score =  394 bits (1011), Expect = e-107
 Identities = 196/387 (50%), Positives = 251/387 (64%), Gaps = 19/387 (4%)
 Frame = +1

Query: 154  EDDEKQQYINEYEDEMNGKEQYNEELDWYGNVEGDLVALNNGHSENCYYPLRPDAEDCSF 333
            E+ E+++  +E  D     +  ++E +   N+E D  A  +  S    YP+RPDA DCSF
Sbjct: 79   EEREEEKEEDEESDSNGEVKASDDEEEQCENLE-DESAAKDDKSARFQYPVRPDAVDCSF 137

Query: 334  YMKTGSCKFRMTCKFNHPLRRKDQAARDTYKQMEENS--DMPGRTKCKYHLTSDGCKYGK 507
            Y++TG+CKF   CKFNHP+RRK+Q A++  K+ E+    + PG+T+CKY+L + GCK+GK
Sbjct: 138  YLRTGTCKFGSNCKFNHPIRRKNQVAKEKVKEKEKEEFPERPGQTECKYYLRTGGCKFGK 197

Query: 508  ACRYNHGRGKPAVAPILEFNFLGLPIRMGEKECPYYMRTGSCKYGSTCRFNHPDPTVA-- 681
            ACRYNH + KP+  P+LE NFLGLPIRMGEKECPYYMRTGSCKYG+ CRFNHPDPT A  
Sbjct: 198  ACRYNHTKAKPSAVPVLELNFLGLPIRMGEKECPYYMRTGSCKYGANCRFNHPDPTAAGG 257

Query: 682  -------XXXXXXXXXXXXKDTFSSWSSAKRLNETAYSVPLIYPPSP-TAPPNGEWNGYQ 837
                               +   +SWSS + LNE A  VP+++ P+    PPN EWNGYQ
Sbjct: 258  YESPSGYGNGGSVPLQGASQSNMASWSSPRALNEPAPFVPIMFSPTQGVPPPNPEWNGYQ 317

Query: 838  TPAYPTSDRKLPTPPAFAMNCLPTDGNFYA--PPRKQPIVEEFPERPGQPECSYYLRTGN 1011
                    R +  PPAF +N   TD N Y     ++Q ++E+FPERPGQPECSY+L+TG+
Sbjct: 318  V-FMLLLKRSMHPPPAFVINNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYFLKTGD 376

Query: 1012 CKYRSTCKYHHPKN---WKAFVTLNDHGLPLRPGQSICAHYSHYGLCKFGPACKHDHSVR 1182
            CK+R+ CKYHHPKN        TL+D GLPLRP Q+IC HY+ YG+CKFGPACK DH V 
Sbjct: 377  CKFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTHYNRYGICKFGPACKFDHPVN 436

Query: 1183 NGTSAS--SNRSDQGQPPRYGKLGEAD 1257
             G SAS  S  S Q QPP +G    AD
Sbjct: 437  YGNSASAPSAESGQDQPPPFGGSVTAD 463


>ref|XP_002511264.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223550379|gb|EEF51866.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 495

 Score =  377 bits (967), Expect = e-102
 Identities = 200/424 (47%), Positives = 260/424 (61%), Gaps = 27/424 (6%)
 Frame = +1

Query: 85   DKECIIEYENEW---GENWDDGV--GRTEDDEKQQYINEYEDEMNGKEQYNEELDWYGNV 249
            DKE   + E E    G + DDG   G +   E++Q   EY    N  ++   + D   +V
Sbjct: 65   DKEDDFDDEGEKDSIGWHQDDGFNSGESNGGEEEQ---EYNINNNDYDKVGNDDDDDDDV 121

Query: 250  EGDLVALNNG--HSENCY-YPLRPDAEDCSFYMKTGSCKFRMTCKFNHPLRRKDQAARDT 420
            E      NNG     N Y YP+RP+AEDCS+YMKTG+CKF   CKFNHP++RK Q +++ 
Sbjct: 122  EKKDERSNNGVNRRHNQYQYPVRPEAEDCSYYMKTGTCKFGSNCKFNHPVKRKMQVSKEK 181

Query: 421  YKQMEENSDMPGRTKCKYHLTSDGCKYGKACRYNHGRGKP-------AVAPILEFNFLGL 579
             K+ EE +D PG+T+CKY+L + GCKYGKACRYNH R KP       AV P L+ NFLGL
Sbjct: 182  VKEREEATDRPGQTECKYYLRTGGCKYGKACRYNHSRAKPLLLQAKTAVFPALDLNFLGL 241

Query: 580  PIRMGEKECPYYMRTGSCKYGSTCRFNHPDPTVA--------XXXXXXXXXXXXKDTFSS 735
            PIR GE+ECPYYMR GSCKYG+ CRFNHPDPT                      +   +S
Sbjct: 242  PIRPGERECPYYMRNGSCKYGANCRFNHPDPTTVGGSDPLAFSNGGSASLQNSLQSNIAS 301

Query: 736  WSSAKRLNETAYSVPLIYPPSPTAP-PNGEWNGYQTPAYPTSDRKLPTPPAFAMNCLPTD 912
            WSS   LNET   + +++ P+   P  N EWNGYQ   +P  +R +  PPA+ ++   TD
Sbjct: 302  WSSPGGLNETPSFMSIMFSPTQGVPSQNPEWNGYQVCYFPLYERSMHQPPAYVISNPATD 361

Query: 913  GNFYAPPRKQPIVEEFPERPGQPECSYYLRTGNCKYRSTCKYHHPKNW---KAFVTLNDH 1083
             N YA  ++Q  VEEFPERPGQPECSY+++TG+CK++S CKYHHPKN         L+D 
Sbjct: 362  TNVYA-HQQQIQVEEFPERPGQPECSYFMKTGDCKFKSNCKYHHPKNHISKSPPCVLSDK 420

Query: 1084 GLPLRPGQSICAHYSHYGLCKFGPACKHDHSVRNGTSASSNRSDQGQPPRYGKLGEADEW 1263
            GLPLRPGQ+IC++YS YG+CKFGPACK DH ++  +S + +  D   P  +   G  +E 
Sbjct: 421  GLPLRPGQNICSYYSRYGICKFGPACKFDHPIQPVSSTTGSADDVRMP--FSDSGTKEEA 478

Query: 1264 NMEL 1275
             M L
Sbjct: 479  KMAL 482


>ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
            [Glycine max]
          Length = 570

 Score =  374 bits (960), Expect = e-101
 Identities = 184/382 (48%), Positives = 243/382 (63%), Gaps = 13/382 (3%)
 Frame = +1

Query: 67   DDVVAGDKECIIEYENEWGENWDDGVGRTEDDEKQQYINEYEDEMNGKEQYNEELDWYGN 246
            DD V  D   +++ ++ W    D+G    E+      +NE E +  G           G+
Sbjct: 170  DDGVRDDVVVVVDDDDGWNGGGDEGCDCIENVN----VNESESDKVG-----------GD 214

Query: 247  VEGDLVALNNGHSENCYYPLRPDAEDCSFYMKTGSCKFRMTCKFNHPLRRKDQAARDTYK 426
            VEG     ++G ++   YPLRP+AEDC+FY+KTG+CKF   CKFNHPLRRK+QA ++   
Sbjct: 215  VEGVKGERSSGRAQQ--YPLRPEAEDCAFYLKTGTCKFGFNCKFNHPLRRKNQAKKENAG 272

Query: 427  QMEENSDMPGRTKCKYHLTSDGCKYGKACRYNHGRGKPAVAPILEFNFLGLPIRMGEKEC 606
            + EE ++  G+ +CKY+L S GCK+GKAC++NH RGK + A   E NFLGLPIR+GEKEC
Sbjct: 273  EREEQAERSGQMECKYYLRSGGCKFGKACKFNHTRGKSSSASATELNFLGLPIRVGEKEC 332

Query: 607  PYYMRTGSCKYGSTCRFNHPDPTVA---------XXXXXXXXXXXXKDTFSSWSSAKRLN 759
             YYMRTGSCK+G+ CRFNHPDPT                       + + SSWSS + LN
Sbjct: 333  LYYMRTGSCKFGANCRFNHPDPTTVGGGDSPSGYGNGSSISLQGVSQSSISSWSSTRPLN 392

Query: 760  ETAYSVPLIYPPSP-TAPPNGEWNGYQTPAYPTSDRKLPTPPAFAMNCLPTDGNFYAPPR 936
            E+A  VP+I  P+P  +P + EWNGYQ P Y  S+R L  P  + MN    + N Y   +
Sbjct: 393  ESAPFVPVILSPNPGVSPQSSEWNGYQAPVY-LSERSLHPPSTYVMNNPAMESNVYMHHQ 451

Query: 937  KQPIVEEFPERPGQPECSYYLRTGNCKYRSTCKYHHPKNWKA---FVTLNDHGLPLRPGQ 1107
            KQ +VEEFPERPG+PECSY+L+TG+CK++S CK+HHPKN  A      L+D GLPLRP Q
Sbjct: 452  KQMLVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPLCNLSDKGLPLRPDQ 511

Query: 1108 SICAHYSHYGLCKFGPACKHDH 1173
            ++C +Y  YG+CKFGPACK DH
Sbjct: 512  NVCTYYRRYGICKFGPACKFDH 533



 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
 Frame = +1

Query: 424 KQM--EENSDMPGRTKCKYHLTSDGCKYGKACRYNHGRGKPAVAPILEFNFLGLPIRMGE 597
           KQM  EE  + PG  +C Y L +  CK+   C+++H + + A  P+   +  GLP+R  +
Sbjct: 452 KQMLVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPLCNLSDKGLPLRPDQ 511

Query: 598 KECPYYMRTGSCKYGSTCRFNHPDPT 675
             C YY R G CK+G  C+F+HP P+
Sbjct: 512 NVCTYYRRYGICKFGPACKFDHPAPS 537



 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
 Frame = +1

Query: 952  EEFPERPGQPECSYYLRTGNCKYRSTCKYHHPKNWKAFVTLNDHG----LPLRPGQSICA 1119
            +++P RP   +C++YL+TG CK+   CK++HP   K      + G       R GQ  C 
Sbjct: 228  QQYPLRPEAEDCAFYLKTGTCKFGFNCKFNHPLRRKNQAKKENAGEREEQAERSGQMECK 287

Query: 1120 HYSHYGLCKFGPACKHDHSVRNGTSASSNRSD-QGQPPRYGK 1242
            +Y   G CKFG ACK +H+    +SAS+   +  G P R G+
Sbjct: 288  YYLRSGGCKFGKACKFNHTRGKSSSASATELNFLGLPIRVGE 329


>ref|XP_003638527.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355504462|gb|AES85665.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 511

 Score =  361 bits (927), Expect = 3e-97
 Identities = 176/370 (47%), Positives = 231/370 (62%), Gaps = 14/370 (3%)
 Frame = +1

Query: 187  YEDEMNGKEQYNEELDWYGN-VEGDLVALNNGHSENCYYPLRPDAEDCSFYMKTGSCKFR 363
            +  + +G    NE  DW  N V GD+   +NG +E   YPLRP+AEDCSFY+KTG+CKF 
Sbjct: 135  WNGDYDGWNDDNEVSDWIENEVSGDVDERSNGGAEQ--YPLRPEAEDCSFYLKTGTCKFG 192

Query: 364  MTCKFNHPLRRKDQAARDTYKQMEENSDMPGRTKCKYHLTSDGCKYGKACRYNHGRGKPA 543
              CKFNHPL R++Q  R+   + +E  +   +T+CKY+  S GCK+GK C+++H RGK +
Sbjct: 193  FNCKFNHPLGRRNQVFRERAGERDELEERSSQTECKYYSRSGGCKFGKDCKFDHTRGKFS 252

Query: 544  VAPILEFNFLGLPIRMGEKECPYYMRTGSCKYGSTCRFNHPDPTVAXXXXXXXXXXXXKD 723
               +LE NFLGLPIR+GEKECPYYMRTGSCK+G+ C+FNHPDPT                
Sbjct: 253  ADQVLELNFLGLPIRLGEKECPYYMRTGSCKFGANCKFNHPDPTSVGGYDSTAGYGNGST 312

Query: 724  T---------FSSWSSAKRLNETAYSVPLIYPPSPTAPP-NGEWNGYQTPAYPTSDRKLP 873
            T            WSS ++ NETA  VP+I  P+P A P + +WNGYQ P Y  S+R + 
Sbjct: 313  TSLQDVSQSSTPPWSSTRKFNETAPFVPIIISPTPGASPRSSDWNGYQAPFY-LSERSMH 371

Query: 874  TPPAFAMNCLPTDGNFYAPPRKQPIVEEFPERPGQPECSYYLRTGNCKYRSTCKYHHPKN 1053
             P  +A+N    + N Y    K   VEEFPERPG+PECS++L+TG+CK++S CK+HHPKN
Sbjct: 372  PPSPYAVNNPAMEMNAYMHRHKHTPVEEFPERPGEPECSFFLKTGDCKFKSHCKFHHPKN 431

Query: 1054 WKAFV---TLNDHGLPLRPGQSICAHYSHYGLCKFGPACKHDHSVRNGTSASSNRSDQGQ 1224
                +    L+D GLPLRPGQ++C HYS YG+CKFGPACK+DH +         R  Q  
Sbjct: 432  RITKLPPCNLSDKGLPLRPGQNVCTHYSRYGICKFGPACKYDHPINLPPPTMPGRYQQSS 491

Query: 1225 PPRYGKLGEA 1254
                  + EA
Sbjct: 492  HTNSASIEEA 501