BLASTX nr result

ID: Bupleurum21_contig00013249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013249
         (998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36047.3| unnamed protein product [Vitis vinifera]              607   e-171
ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vi...   607   e-171
emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]   607   e-171
ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis ...   603   e-170
ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus c...   599   e-169

>emb|CBI36047.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score =  607 bits (1564), Expect = e-171
 Identities = 285/331 (86%), Positives = 313/331 (94%), Gaps = 1/331 (0%)
 Frame = +3

Query: 9    WVKKLTRVRGYTDQMVEMANAVIFTFGSYHLGVHGPGADIDTLCVGPSYVN-QKDFFFIL 185
            WVK+LTR+RGYTDQMVE ANAV+FTFGSY LGVHGPG DIDTLC+GPSYV+ ++DFFFIL
Sbjct: 74   WVKQLTRLRGYTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGPSYVSREEDFFFIL 133

Query: 186  HSVLEEIEEITELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPDDLDISDVSVLYHV 365
            H++L ++EE+TELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVP+DLDISD+SVLY++
Sbjct: 134  HNILADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPEDLDISDLSVLYNI 193

Query: 366  DEQTVRILNGCRVADQILKLVPNIEHFRTTLRCIKYWAKKRGVYSNVTGFLGGVNWALLV 545
            DE TVR LNGCRVADQILKLVPN+EHF TTLRC+K+WAK+RGVYSNVTGFLGGVNWALLV
Sbjct: 194  DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 253

Query: 546  AKVSQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRRNPRDRTHHM 725
            A+V QLYPNA+PSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPR+NPRDRTHHM
Sbjct: 254  ARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHM 313

Query: 726  PIITPAYPCMNSSYNVSTSTLRVMMEQFHFGNKICEDIDLNKSQWRALFEPYLFFESYNN 905
            PIITPAYPCMNSSYNVS STLRVMMEQF +GNKICE I+L+ +QW ALFEPYLFFESY N
Sbjct: 314  PIITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWGALFEPYLFFESYKN 373

Query: 906  YLQLDIEAADADDLRAWKGWVESRLRQLTLM 998
            YLQ+DI A D DDLRAWKGWVESRLRQLTLM
Sbjct: 374  YLQVDIVAVDIDDLRAWKGWVESRLRQLTLM 404


>ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 770

 Score =  607 bits (1564), Expect = e-171
 Identities = 285/331 (86%), Positives = 313/331 (94%), Gaps = 1/331 (0%)
 Frame = +3

Query: 9    WVKKLTRVRGYTDQMVEMANAVIFTFGSYHLGVHGPGADIDTLCVGPSYVN-QKDFFFIL 185
            WVK+LTR+RGYTDQMVE ANAV+FTFGSY LGVHGPG DIDTLC+GPSYV+ ++DFFFIL
Sbjct: 74   WVKQLTRLRGYTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGPSYVSREEDFFFIL 133

Query: 186  HSVLEEIEEITELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPDDLDISDVSVLYHV 365
            H++L ++EE+TELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVP+DLDISD+SVLY++
Sbjct: 134  HNILADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPEDLDISDLSVLYNI 193

Query: 366  DEQTVRILNGCRVADQILKLVPNIEHFRTTLRCIKYWAKKRGVYSNVTGFLGGVNWALLV 545
            DE TVR LNGCRVADQILKLVPN+EHF TTLRC+K+WAK+RGVYSNVTGFLGGVNWALLV
Sbjct: 194  DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 253

Query: 546  AKVSQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRRNPRDRTHHM 725
            A+V QLYPNA+PSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPR+NPRDRTHHM
Sbjct: 254  ARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHM 313

Query: 726  PIITPAYPCMNSSYNVSTSTLRVMMEQFHFGNKICEDIDLNKSQWRALFEPYLFFESYNN 905
            PIITPAYPCMNSSYNVS STLRVMMEQF +GNKICE I+L+ +QW ALFEPYLFFESY N
Sbjct: 314  PIITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWGALFEPYLFFESYKN 373

Query: 906  YLQLDIEAADADDLRAWKGWVESRLRQLTLM 998
            YLQ+DI A D DDLRAWKGWVESRLRQLTLM
Sbjct: 374  YLQVDIVAVDIDDLRAWKGWVESRLRQLTLM 404


>emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]
          Length = 778

 Score =  607 bits (1564), Expect = e-171
 Identities = 285/331 (86%), Positives = 313/331 (94%), Gaps = 1/331 (0%)
 Frame = +3

Query: 9    WVKKLTRVRGYTDQMVEMANAVIFTFGSYHLGVHGPGADIDTLCVGPSYVN-QKDFFFIL 185
            WVK+LTR+RGYTDQMVE ANAV+FTFGSY LGVHGPG DIDTLC+GPSYV+ ++DFFFIL
Sbjct: 65   WVKQLTRLRGYTDQMVEDANAVLFTFGSYRLGVHGPGTDIDTLCIGPSYVSREEDFFFIL 124

Query: 186  HSVLEEIEEITELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPDDLDISDVSVLYHV 365
            H++L ++EE+TELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVP+DLDISD+SVLY++
Sbjct: 125  HNILADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPEDLDISDLSVLYNI 184

Query: 366  DEQTVRILNGCRVADQILKLVPNIEHFRTTLRCIKYWAKKRGVYSNVTGFLGGVNWALLV 545
            DE TVR LNGCRVADQILKLVPN+EHF TTLRC+K+WAK+RGVYSNVTGFLGGVNWALLV
Sbjct: 185  DEPTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 244

Query: 546  AKVSQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRRNPRDRTHHM 725
            A+V QLYPNA+PSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPR+NPRDRTHHM
Sbjct: 245  ARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHM 304

Query: 726  PIITPAYPCMNSSYNVSTSTLRVMMEQFHFGNKICEDIDLNKSQWRALFEPYLFFESYNN 905
            PIITPAYPCMNSSYNVS STLRVMMEQF +GNKICE I+L+ +QW ALFEPYLFFESY N
Sbjct: 305  PIITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNAQWGALFEPYLFFESYKN 364

Query: 906  YLQLDIEAADADDLRAWKGWVESRLRQLTLM 998
            YLQ+DI A D DDLRAWKGWVESRLRQLTLM
Sbjct: 365  YLQVDIVAVDIDDLRAWKGWVESRLRQLTLM 395


>ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
          Length = 758

 Score =  603 bits (1555), Expect = e-170
 Identities = 282/331 (85%), Positives = 313/331 (94%), Gaps = 1/331 (0%)
 Frame = +3

Query: 9    WVKKLTRVRGYTDQMVEMANAVIFTFGSYHLGVHGPGADIDTLCVGPSYVN-QKDFFFIL 185
            WVK+LTR++GYTDQMVE ANA IFTFGSY LGVHGPGADIDTLCVGPSYVN ++DFF++L
Sbjct: 81   WVKQLTRIKGYTDQMVEDANAAIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFYML 140

Query: 186  HSVLEEIEEITELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPDDLDISDVSVLYHV 365
            H++LEE+EE++ELQPVPDAHVPVMKFKFDGISIDLLYASIS LVVP+DLDISDVSVLY+V
Sbjct: 141  HNILEEMEEVSELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPEDLDISDVSVLYNV 200

Query: 366  DEQTVRILNGCRVADQILKLVPNIEHFRTTLRCIKYWAKKRGVYSNVTGFLGGVNWALLV 545
            DE TVR LNGCRVADQILKLVPN+E FRT LRC+K+WAK+RGVYSNVTGFLGGVNWALLV
Sbjct: 201  DEPTVRSLNGCRVADQILKLVPNVESFRTALRCLKFWAKRRGVYSNVTGFLGGVNWALLV 260

Query: 546  AKVSQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRRNPRDRTHHM 725
            A+V QLYPNA+PSML+SRFFRVYT WRWPNPVMLCAIEED+LG SVWDPR+NPRDRTHHM
Sbjct: 261  ARVCQLYPNAVPSMLLSRFFRVYTLWRWPNPVMLCAIEEDDLGCSVWDPRKNPRDRTHHM 320

Query: 726  PIITPAYPCMNSSYNVSTSTLRVMMEQFHFGNKICEDIDLNKSQWRALFEPYLFFESYNN 905
            PIITPAYPCMNSSYNVSTSTLRVMMEQF FGNK+CE+I+LNK+QW +LFEPYLFFESY N
Sbjct: 321  PIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKVCEEIELNKAQWSSLFEPYLFFESYKN 380

Query: 906  YLQLDIEAADADDLRAWKGWVESRLRQLTLM 998
            YLQ+DI AADADDLR+WKGWVESR R LTL+
Sbjct: 381  YLQVDIVAADADDLRSWKGWVESRFRHLTLL 411


>ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus communis]
            gi|223544354|gb|EEF45875.1| Poly(A) polymerase beta,
            putative [Ricinus communis]
          Length = 754

 Score =  599 bits (1544), Expect = e-169
 Identities = 285/330 (86%), Positives = 308/330 (93%), Gaps = 1/330 (0%)
 Frame = +3

Query: 9    WVKKLTRVRGYTDQMVEMANAVIFTFGSYHLGVHGPGADIDTLCVGPSYVN-QKDFFFIL 185
            W+K+LTR RGY+DQMV+ ANAVIFTFGSY LGVHGPGADIDTLCVGPSYVN ++DFF +L
Sbjct: 82   WIKQLTRQRGYSDQMVDEANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFILL 141

Query: 186  HSVLEEIEEITELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPDDLDISDVSVLYHV 365
            H +L E++EITELQPVPDAHVPVMKFKF GISIDLLYASISL VVP+DLDIS  SVLY V
Sbjct: 142  HDILAEMDEITELQPVPDAHVPVMKFKFQGISIDLLYASISLPVVPEDLDISHGSVLYDV 201

Query: 366  DEQTVRILNGCRVADQILKLVPNIEHFRTTLRCIKYWAKKRGVYSNVTGFLGGVNWALLV 545
            DEQTVR LNGCRVADQILKLVPN+EHFRTTLRC+K+WAK+RGVYSNVTGFLGGVNWALLV
Sbjct: 202  DEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLV 261

Query: 546  AKVSQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRRNPRDRTHHM 725
            A++ QLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGF VWDPRRNPRDR HHM
Sbjct: 262  ARLCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRRNPRDRFHHM 321

Query: 726  PIITPAYPCMNSSYNVSTSTLRVMMEQFHFGNKICEDIDLNKSQWRALFEPYLFFESYNN 905
            PIITPAYPCMNSSYNVS STLRVMMEQF +GNKICE+I+LNK+QW ALFEPYLFFE+Y N
Sbjct: 322  PIITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEEIELNKAQWSALFEPYLFFEAYKN 381

Query: 906  YLQLDIEAADADDLRAWKGWVESRLRQLTL 995
            YLQ+DI AADADDL AWKGWVESRLRQLTL
Sbjct: 382  YLQIDIIAADADDLLAWKGWVESRLRQLTL 411


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