BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013239
         (1186 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29694.3| unnamed protein product [Vitis vinifera]              246   2e-83
ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|2...   221   8e-76
ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852...   224   3e-56
ref|XP_003540141.1| PREDICTED: uncharacterized protein LOC100798...   145   6e-48
gb|ABE91932.1| Nonsense-mediated decay UPF3 [Medicago truncatula]     151   8e-48

>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  246 bits (629), Expect(2) = 2e-83
 Identities = 144/325 (44%), Positives = 191/325 (58%), Gaps = 3/325 (0%)
 Frame = -1

Query: 967  VRQKRAARGGSRRSLTNGKPXXXXXXXXXXXXXXXXXXXXXXXXRTSTAMYVLRDTSKAA 788
            VRQKRAA+G SRRSL+NGK                         R ST MYVLRDT+K+ 
Sbjct: 163  VRQKRAAKGVSRRSLSNGKLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKST 222

Query: 787  GGKDKSSHVIVPRRNDQQISEKSVFVDAAGSG--LSSESGVPRSNDNXXXXXXXXXXXXK 614
              KDKS+ ++VP+R+DQ +S+KSV + A G    L  ESGV  + D             +
Sbjct: 223  SAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDAGKKKVLLLKGKER 282

Query: 613  EIPHVTSHLXXXXXXXXXXXXXXIHAPRQNHRHDTSGKVIRSILLNKESRPNASRL-PSE 437
            EI H   HL               +AP+QN R + SG++IRSILLNK++R + S +  +E
Sbjct: 283  EISH---HLLQQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSSMFQTE 339

Query: 436  IPIQVRNQEKDKRPPRPSSVQLYNRDTSEAPEDRTVGSERHNFYAEKPEKRTRNKDRPDR 257
               Q  N EK+KRPPRP  +QL +++T+ A +D+ VG++ H+F +EK +KRTRNKDRPDR
Sbjct: 340  QQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDKRTRNKDRPDR 399

Query: 256  GVWTPLRRSDGXXXXXXXXXXXXXXXXXSLVDTAEGTRGDTKNDITSARSGEFKHFSSGR 77
            GVWTPLRRSDG                 S  D  EG+ G+ ++D+++ARSGE K   SGR
Sbjct: 400  GVWTPLRRSDGSHASDESLSSSASQPTSS--DFPEGSHGEMRSDMSNARSGEVKALGSGR 457

Query: 76   GGHLSVDKGSFKHSGFHGPVHNGKD 2
            GGH ++D GS KHSG  GP H+ KD
Sbjct: 458  GGHSALDNGSHKHSGRRGPTHSVKD 482



 Score = 90.1 bits (222), Expect(2) = 2e-83
 Identities = 41/48 (85%), Positives = 47/48 (97%)
 Frame = -3

Query: 1184 KDGREGTIYKDPEYLEFLEFIAKPVENLPSAELQLERRDAERAGAVKD 1041
            KDGREGTI+KDPEY+EF+E +AKPVENLPSAE+QLERR+AERAGAVKD
Sbjct: 105  KDGREGTIFKDPEYMEFVELLAKPVENLPSAEIQLERREAERAGAVKD 152


>ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|222839085|gb|EEE77436.1|
            predicted protein [Populus trichocarpa]
          Length = 527

 Score =  221 bits (562), Expect(2) = 8e-76
 Identities = 137/324 (42%), Positives = 173/324 (53%), Gaps = 2/324 (0%)
 Frame = -1

Query: 967  VRQKRAARGGSRRSLTNGKPXXXXXXXXXXXXXXXXXXXXXXXXRTSTAMYVLRDTSKAA 788
            VRQKR A+ G RR L+NGK                         R ST MYVLRDT+K+ 
Sbjct: 165  VRQKRVAKNGPRRILSNGK--LSRRAGGSGSPSSSSLKRGSEKKRISTTMYVLRDTAKST 222

Query: 787  GGKDKSSHVIVPRRNDQQISEKSVFVDAAGSG-LSSESGVPRSNDNXXXXXXXXXXXXKE 611
             GKDKS++V VP+R+DQQ+S        +G+  L  ES V    D+            KE
Sbjct: 223  SGKDKSTYVHVPKRDDQQLSNAVTLGSGSGTAVLEDESVVSGITDSGKKKILLLKGKEKE 282

Query: 610  IPHVTSHLXXXXXXXXXXXXXXIHAPRQNHRHDTSGKVIRSILLNKESRP-NASRLPSEI 434
            I  VT  +                   ++ R +TSG++IRSILLNK+SR   +S + SE 
Sbjct: 283  ISLVTGTMSQQQSISSSDRNIISSTALKSQRRETSGRMIRSILLNKDSRHIRSSGVHSEP 342

Query: 433  PIQVRNQEKDKRPPRPSSVQLYNRDTSEAPEDRTVGSERHNFYAEKPEKRTRNKDRPDRG 254
             +Q  N EK+KRPPRP   QL  +D +  P+D+ VG++ H F  EK EKRTRNKDRPDRG
Sbjct: 343  QMQTSNLEKEKRPPRPPHAQLGLKDANGTPDDKVVGNDLHGFPNEKQEKRTRNKDRPDRG 402

Query: 253  VWTPLRRSDGXXXXXXXXXXXXXXXXXSLVDTAEGTRGDTKNDITSARSGEFKHFSSGRG 74
            VWTPLRRSDG                 S+ D+++G  GD K D  + RSGE K   SGRG
Sbjct: 403  VWTPLRRSDGSYASDESLLSSASQSTQSVFDSSQGNHGDVKVDSLNLRSGEVKVLGSGRG 462

Query: 73   GHLSVDKGSFKHSGFHGPVHNGKD 2
             H S+D GS KH G  GP H  +D
Sbjct: 463  NHSSLDNGSHKHFGRRGPSHIVRD 486



 Score = 90.9 bits (224), Expect(2) = 8e-76
 Identities = 44/49 (89%), Positives = 46/49 (93%)
 Frame = -3

Query: 1184 KDGREGTIYKDPEYLEFLEFIAKPVENLPSAELQLERRDAERAGAVKDA 1038
            KDGREGTI KDPEYLEFLE IAKPVENLPSAE+QLERR+AERAGA KDA
Sbjct: 107  KDGREGTISKDPEYLEFLELIAKPVENLPSAEIQLERREAERAGAAKDA 155


>ref|XP_003633401.1| PREDICTED: uncharacterized protein LOC100852735 [Vitis vinifera]
          Length = 322

 Score =  224 bits (572), Expect = 3e-56
 Identities = 125/276 (45%), Positives = 170/276 (61%), Gaps = 3/276 (1%)
 Frame = -1

Query: 820 MYVLRDTSKAAGGKDKSSHVIVPRRNDQQISEKSVFVDAAGSG--LSSESGVPRSNDNXX 647
           MYVLRDT+K+   KDKS+ ++VP+R+DQ +S+KSV + A G    L  ESGV  + D   
Sbjct: 1   MYVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDAGK 60

Query: 646 XXXXXXXXXXKEIPHVTSHLXXXXXXXXXXXXXXIHAPRQNHRHDTSGKVIRSILLNKES 467
                     +EI H   HL               +AP+QN R + SG++IRSILLNK++
Sbjct: 61  KKVLLLKGKEREISH---HLLQQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDA 117

Query: 466 RPNASRL-PSEIPIQVRNQEKDKRPPRPSSVQLYNRDTSEAPEDRTVGSERHNFYAEKPE 290
           R + S +  +E   Q  N EK+KRPPRP  +QL +++T+ A +D+ VG++ H+F +EK +
Sbjct: 118 RQSQSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQD 177

Query: 289 KRTRNKDRPDRGVWTPLRRSDGXXXXXXXXXXXXXXXXXSLVDTAEGTRGDTKNDITSAR 110
           KRTRNKDRPDRGVWTPLRRSDG                 S  D  EG+ G+ ++D+++AR
Sbjct: 178 KRTRNKDRPDRGVWTPLRRSDGSHASDESLSSSASQPTSS--DFPEGSHGEMRSDMSNAR 235

Query: 109 SGEFKHFSSGRGGHLSVDKGSFKHSGFHGPVHNGKD 2
           SGE K   SGRGGH ++D GS KHSG  GP H+ KD
Sbjct: 236 SGEVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKD 271


>ref|XP_003540141.1| PREDICTED: uncharacterized protein LOC100798866 [Glycine max]
          Length = 510

 Score =  145 bits (365), Expect(2) = 6e-48
 Identities = 113/327 (34%), Positives = 158/327 (48%), Gaps = 5/327 (1%)
 Frame = -1

Query: 967  VRQKRAARGGSRRSLTNGKPXXXXXXXXXXXXXXXXXXXXXXXXRTSTAMYVLRDTSKAA 788
            VRQKRAA+G  RR L+NGK                         R S  MYV RD  K++
Sbjct: 159  VRQKRAAKG-PRRPLSNGKVSRRAGTSSNGGPSSATSRRGSGKKRVSATMYVARDPGKSS 217

Query: 787  GGKDKSSHVIVPRRNDQQISEK-SVFVDAAGSGLSSESGVPRSNDNXXXXXXXXXXXXKE 611
              KDKSS+ +VP+++DQ +  K S    + G+    E+GV  ++D             +E
Sbjct: 218  TIKDKSSYTLVPKQDDQHLPNKASNMASSDGNQTLDENGVSGNHDAGKKKVLLLKGKERE 277

Query: 610  IPHVT---SHLXXXXXXXXXXXXXXIHAPRQNHRHDTSGKVIRSILLNKE-SRPNASRLP 443
            I  V+   S                    +Q+ RH+ SG++IRSIL  KE  +  +SR  
Sbjct: 278  IITVSDLDSMSQHHNVTSSAKTVVGSTVLKQSQRHEGSGRIIRSILSKKELHQSQSSRAL 337

Query: 442  SEIPIQVRNQEKDKRPPRPSSVQLYNRDTSEAPEDRTVGSERHNFYAEKPEKRTRNKDRP 263
            SE  I   N EK+K+PPRP  VQL  + ++  PE++ +G    +  +E+ E+  R+KDRP
Sbjct: 338  SEQKILTSNLEKEKQPPRPLHVQLILKGSNGTPENK-IGVHDSHVSSERQERHVRHKDRP 396

Query: 262  DRGVWTPLRRSDGXXXXXXXXXXXXXXXXXSLVDTAEGTRGDTKNDITSARSGEFKHFSS 83
            DRGVWT   R +G                   VD  EG++ D K+D+ +ARS E K F S
Sbjct: 397  DRGVWT--SRFNGADVSFSSPASSQ-------VDPLEGSQADLKHDMPNARSVEVKSFGS 447

Query: 82   GRGGHLSVDKGSFKHSGFHGPVHNGKD 2
             R  H S + G  KH G  GP +  KD
Sbjct: 448  VRTSH-SSENGFNKHFGRRGPSYGVKD 473



 Score = 73.6 bits (179), Expect(2) = 6e-48
 Identities = 34/43 (79%), Positives = 40/43 (93%)
 Frame = -3

Query: 1184 KDGREGTIYKDPEYLEFLEFIAKPVENLPSAELQLERRDAERA 1056
            KD R+GTIYKD EYLEFLE +AKPVENLPSAE+QLE+R+AER+
Sbjct: 105  KDLRDGTIYKDSEYLEFLELLAKPVENLPSAEIQLEKREAERS 147


>gb|ABE91932.1| Nonsense-mediated decay UPF3 [Medicago truncatula]
          Length = 500

 Score =  151 bits (381), Expect(2) = 8e-48
 Identities = 117/329 (35%), Positives = 157/329 (47%), Gaps = 7/329 (2%)
 Frame = -1

Query: 967  VRQKRAARGGSR----RSLTNGKPXXXXXXXXXXXXXXXXXXXXXXXXRTSTAMYVLRDT 800
            VR KRA + G R    RSL+NGK                         R ST MYV RD 
Sbjct: 157  VRHKRATKNGPRQQQHRSLSNGKVTRRSLTTSNGSSTSAPSRRGYTKNRLSTTMYVARDP 216

Query: 799  SKAAGGKDKSSHVIVPRRNDQQISEKSV-FVDAAGSGLSSESGVPRSNDNXXXXXXXXXX 623
             K++  +DKS++++VPR+ DQ  S KS     + G+    E+G+  SND+          
Sbjct: 217  GKSSTVQDKSTYILVPRQGDQNPSNKSSNTASSDGNQTFDENGIAGSNDSGKKKLLLLKG 276

Query: 622  XXKEIPHVT-SHLXXXXXXXXXXXXXXIHAPRQNHRHDTSGKVIRSILLNKESRPN-ASR 449
              +E   V+ S                  A +QN RH+  G++I+SIL NK+ R + +SR
Sbjct: 277  NERETITVSDSDSMSQHHTSSTKTILSSTALKQNQRHEGRGRIIKSILTNKDFRQSQSSR 336

Query: 448  LPSEIPIQVRNQEKDKRPPRPSSVQLYNRDTSEAPEDRTVGSERHNFYAEKPEKRTRNKD 269
              SE  IQ  N E++K+  RP  VQL  + T  APE+R      H   +E+ E+R R+KD
Sbjct: 337  AHSERQIQTSNLEREKQSTRPVHVQLILKGTDGAPENRITVHGLH-VSSERQERRFRHKD 395

Query: 268  RPDRGVWTPLRRSDGXXXXXXXXXXXXXXXXXSLVDTAEGTRGDTKNDITSARSGEFKHF 89
            RPDRGVWT   RS+G                   VD  EG   + K+D  SARSGE K  
Sbjct: 396  RPDRGVWT--SRSNGGGESLSSSASSQ-------VDPLEGGHTELKHDTPSARSGEVKSL 446

Query: 88   SSGRGGHLSVDKGSFKHSGFHGPVHNGKD 2
             S R  H S + G  KH G  GP++  KD
Sbjct: 447  GSFRASH-SSENGFSKHFGRRGPIYGVKD 474



 Score = 67.0 bits (162), Expect(2) = 8e-48
 Identities = 29/42 (69%), Positives = 39/42 (92%)
 Frame = -3

Query: 1184 KDGREGTIYKDPEYLEFLEFIAKPVENLPSAELQLERRDAER 1059
            +D R+GTI+KDP+YL+FL+ IAKPVENLPSAE+QL++R+A R
Sbjct: 103  EDARDGTIFKDPDYLQFLQQIAKPVENLPSAEIQLDKREAVR 144