BLASTX nr result
ID: Bupleurum21_contig00013237
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00013237
(1351 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera] 344 3e-92
ref|XP_002518041.1| conserved hypothetical protein [Ricinus comm... 338 2e-90
emb|CBI17281.3| unnamed protein product [Vitis vinifera] 315 1e-83
ref|XP_003601650.1| Small subunit processome component-like prot... 292 1e-76
ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subuni... 273 7e-71
>emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera]
Length = 2461
Score = 344 bits (883), Expect = 3e-92
Identities = 198/443 (44%), Positives = 288/443 (65%), Gaps = 5/443 (1%)
Frame = +2
Query: 2 NELVEDFEEEVVYLLVIFFERLP---KPCSSLLEKGHKAPSEILVKVLNLSKKTIEYWVH 172
N L+E EEV++L+++F ERL + S L+E A E + ++ + ++ + YW
Sbjct: 194 NSLIETSPEEVIFLMLMFNERLQVDMQSSSFLVE----ASEEGVSRICSFLQEALLYWTG 249
Query: 173 AIKNIRHGNPECVQFEESRLVFLYGIVKSFPYVIDAQSERALLMDLVDALDQLLLTDSEN 352
I NI H + V E +L L+GI+ +++ Q++ +LLM LVDALDQLL+ +
Sbjct: 250 VINNIVHKDLSSVPSCEVKLPMLWGIIGCCSHMLGIQADPSLLMGLVDALDQLLMIE--- 306
Query: 353 IAGFTKKIWTSLIGCCLGSYVKLHSVQIRNDEASVVKLLNLAKRYKSSSLVLSTVADFLD 532
AGF K W SL+G LGS+ KL S + ++ K L+LAKRY+SSS VL +VA+ LD
Sbjct: 307 -AGFPKSTWQSLMGAALGSFHKLGSFK-KSGVEETNKFLHLAKRYRSSSQVLFSVAELLD 364
Query: 533 SIYESTLVHTDSS-KIQSDLRAEKAVEALAIFAENLCHEDKQIRLSTLRILCHYESLIAE 709
S++ ST+ + K +L+AEKAV+A +F+ENL H DK IR+STLRILCHYE L E
Sbjct: 365 SMHGSTIQENNGHMKFHPELKAEKAVDAFDMFSENLSHPDKGIRVSTLRILCHYEPLNGE 424
Query: 710 NISRDHPPADKKMKMEVSHAHCEGERGTNVLNLLLSIEASPXXXXXXXXXXXXXXXXQMD 889
+ + P +KKM+ EVS + NVL++L SIE +P QMD
Sbjct: 425 S---NVQPVEKKMQTEVSPTSYAEIQRNNVLHILFSIEDTPLSISTSRKVILSISKIQMD 481
Query: 890 LIAAKILEPYVPVLLYGIIGVFHNRFNSLWNPAIECLSVIIGRYPGVVWERYIQYLKRCQ 1069
L AA+I E Y+PVLL GIIG+FHNRF+ LW+PAIECLSV+I ++ G+VW+R + YL++CQ
Sbjct: 482 LSAARICEAYIPVLLNGIIGIFHNRFSYLWDPAIECLSVLISKHVGLVWDRLVSYLEQCQ 541
Query: 1070 SLFLTCRDQLAESIP-ESSFESHDLITHFKLFISPPSDGTPCGTILSLLIQSLQKVLIIS 1246
S+FLT D L+E I E ++ +L+ F LF++P SD TPC T+LSLL++ LQK+ ++
Sbjct: 542 SVFLTTHD-LSEGINIEVCGKTSELVERFNLFVNPASDSTPCATVLSLLLRCLQKIPVVV 600
Query: 1247 ESRTRQIIPLFLRYLGYNHNNLV 1315
ESR+R+IIP FL++LGY +++++
Sbjct: 601 ESRSRKIIPSFLKFLGYANDDIM 623
>ref|XP_002518041.1| conserved hypothetical protein [Ricinus communis]
gi|223542637|gb|EEF44174.1| conserved hypothetical
protein [Ricinus communis]
Length = 2535
Score = 338 bits (867), Expect = 2e-90
Identities = 191/453 (42%), Positives = 275/453 (60%), Gaps = 3/453 (0%)
Frame = +2
Query: 2 NELVEDFEEEVVYLLVIFFERLPKPC--SSLLEKGHKAPSEILVKVLNLSKKTIEYWVHA 175
N+L+E ++EVV LL+ F ERL + S L+ E L ++ K T+ WV
Sbjct: 434 NDLMETSQKEVVCLLMSFCERLQEDSLGSGFLDG---TSEEGLSRIRGFLKGTMCSWVGM 490
Query: 176 IKNIRHGNPECVQFEESRLVFLYGIVKSFPYVIDAQSERALLMDLVDALDQLLLTDSENI 355
I NI GNP C + L L+G++ +PY++D + + +LLMD +DALD LL+ E+I
Sbjct: 491 INNITLGNPSCTVISKDELALLWGVICCYPYMMDIREKPSLLMDFIDALDGLLMIGDESI 550
Query: 356 AGFTKKIWTSLIGCCLGSYVKLHSVQIRNDEASVVKLLNLAKRYKSSSLVLSTVADFLDS 535
AG +K+ W SL+G L SY K + +E S K+L LA+ YKSSS +LS +AD LDS
Sbjct: 551 AGVSKRTWQSLLGAALNSYFKCGKEESGLEETS--KILYLARTYKSSSHILSAIADCLDS 608
Query: 536 IYESTL-VHTDSSKIQSDLRAEKAVEALAIFAENLCHEDKQIRLSTLRILCHYESLIAEN 712
++ T+ + + +L KAV+AL IFA NLC+ DK+IR+STLRILCHY+ L +E
Sbjct: 609 VHGPTMEAYRNHISYHPELARNKAVDALGIFANNLCNSDKEIRVSTLRILCHYQYLDSEI 668
Query: 713 ISRDHPPADKKMKMEVSHAHCEGERGTNVLNLLLSIEASPXXXXXXXXXXXXXXXXQMDL 892
+ D P +K+MK EV H LLLSIEA+P QM L
Sbjct: 669 SAEDRRP-EKRMKTEVLH-------------LLLSIEATPLSISTSRKVILLISKMQMGL 714
Query: 893 IAAKILEPYVPVLLYGIIGVFHNRFNSLWNPAIECLSVIIGRYPGVVWERYIQYLKRCQS 1072
A +I + Y+P++L GIIG+FHNRF+ LWNPA ECL+V+IG +VW++++ Y ++C S
Sbjct: 715 SAGRISKTYIPIVLSGIIGIFHNRFSYLWNPASECLAVLIGENATLVWDKFVHYFEKCLS 774
Query: 1073 LFLTCRDQLAESIPESSFESHDLITHFKLFISPPSDGTPCGTILSLLIQSLQKVLIISES 1252
+F + D+L E ++S++LI F F P SD TP T+LS L+Q+LQK+ I+E+
Sbjct: 775 VFQSSHDKLDGENTELPYKSNELIDRFNSFAVPESDSTPHATVLSSLLQTLQKIPSIAEA 834
Query: 1253 RTRQIIPLFLRYLGYNHNNLVSVKSYELQFTTG 1351
+RQI+PLFL+YLGY +++L SV S+ G
Sbjct: 835 HSRQIVPLFLKYLGYENDDLHSVGSFNSDSCNG 867
>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
Length = 2629
Score = 315 bits (808), Expect = 1e-83
Identities = 186/454 (40%), Positives = 273/454 (60%), Gaps = 4/454 (0%)
Frame = +2
Query: 2 NELVEDFEEEVVYLLVIFFERLP---KPCSSLLEKGHKAPSEILVKVLNLSKKTIEYWVH 172
N L+E EEV++L+++F ERL + S L+E A E + ++ + ++ + YW
Sbjct: 448 NSLIETSPEEVIFLMLMFNERLQVDMQSSSFLVE----ASEEGVSRICSFLQEALLYWTG 503
Query: 173 AIKNIRHGNPECVQFEESRLVFLYGIVKSFPYVIDAQSERALLMDLVDALDQLLLTDSEN 352
I NI H + V E +L L+GI+ +++ Q++ +LLM LVDALDQLL+ +++N
Sbjct: 504 VINNIVHKDLSSVPSCEVKLPMLWGIIGCCSHMLGIQADPSLLMGLVDALDQLLMIEADN 563
Query: 353 IAGFTKKIWTSLIGCCLGSYVKLHSVQIRNDEASVVKLLNLAKRYKSSSLVLSTVADFLD 532
+AGF K W SL+G LGS+ KL S + E +++ L L+
Sbjct: 564 VAGFPKSTWQSLMGAALGSFHKLGSFKKSGVE-------------ETNKFFLKPFFCLLN 610
Query: 533 SIYESTLVHTDSSKIQSDLRAEKAVEALAIFAENLCHEDKQIRLSTLRILCHYESLIAEN 712
+Y H K +L+AEKAV+A +F+ENL H DK IR+STLRILCHYE L E+
Sbjct: 611 YVYCKNNGHM---KFHPELKAEKAVDAFDMFSENLSHPDKGIRVSTLRILCHYEPLNGES 667
Query: 713 ISRDHPPADKKMKMEVSHAHCEGERGTNVLNLLLSIEASPXXXXXXXXXXXXXXXXQMDL 892
+ P +KKM+ EV H +L SIE +P QMDL
Sbjct: 668 ---NVQPVEKKMQTEVLH-------------ILFSIEDTPLSISTSRKVILSISKIQMDL 711
Query: 893 IAAKILEPYVPVLLYGIIGVFHNRFNSLWNPAIECLSVIIGRYPGVVWERYIQYLKRCQS 1072
AA+I E Y+PVLL GIIG+FHNRF+ LW+PAIECLSV+I ++ G+VW+R + YL++CQS
Sbjct: 712 SAARICEAYIPVLLNGIIGIFHNRFSYLWDPAIECLSVLISKHVGLVWDRLVSYLEQCQS 771
Query: 1073 LFLTCRDQLAESIP-ESSFESHDLITHFKLFISPPSDGTPCGTILSLLIQSLQKVLIISE 1249
+FLT D L+E I E ++ +L+ F LF++P SD TPC T+LSLL++ LQK+ ++ E
Sbjct: 772 VFLTTHD-LSEGINIEVCGKTSELVERFNLFVNPASDSTPCATVLSLLLRCLQKIPVVVE 830
Query: 1250 SRTRQIIPLFLRYLGYNHNNLVSVKSYELQFTTG 1351
SR+R+IIP FL++LGY +++++SV S+ G
Sbjct: 831 SRSRKIIPSFLKFLGYANDDIMSVGSFHTHACKG 864
>ref|XP_003601650.1| Small subunit processome component-like protein [Medicago truncatula]
gi|355490698|gb|AES71901.1| Small subunit processome
component-like protein [Medicago truncatula]
Length = 2733
Score = 292 bits (748), Expect = 1e-76
Identities = 176/446 (39%), Positives = 259/446 (58%), Gaps = 2/446 (0%)
Frame = +2
Query: 2 NELVEDFEEEVVYLLVIFFERLPKPCSSLLEKGHKAPSEILVKVLNLSKKTIEYWVHAIK 181
NEL+E EE+V+ L F E++ + + E L ++ N + TI W+ I
Sbjct: 460 NELMEISEEKVIQLFQSFCEKMQLDIRGP-DFLDRESEEALARICNHLEGTIRSWIEKIN 518
Query: 182 NIRHGNPECVQFEESRLVFLYGIVKSFPYVIDAQSERALLMDLVDALDQLLLTDSENIAG 361
NI H + C + +E ++ L+G+V + ++ + +LL+DL+DA+DQLL + +IA
Sbjct: 519 NIGHADVSC-EIDERKVALLWGVVNCYSHMSIVDAVPSLLVDLMDAVDQLLTVKAVHIAD 577
Query: 362 FTKKIWTSLIGCCLGSYVKL-HSVQIRNDEASVVKLLNLAKRYKSSSLVLSTVADFLDSI 538
+K+ W S+IG L S+ +L + + DE K L+ AKRYKSS VL VA +L+S
Sbjct: 578 MSKEAWESIIGASLSSFNRLCYDSNLGADETK--KFLSFAKRYKSSPHVLPAVAGYLESK 635
Query: 539 YESTLVHTDSSKIQSDLRAEKAVEALAIFAENLCHEDKQIRLSTLRILCHYESLIAENIS 718
Y S+L T +L E E++A FA+NLCH DK++R+STL+ILCHY+SL E IS
Sbjct: 636 YGSSLEETGCRVYHPELE-EMIAESVAAFADNLCHSDKEVRISTLKILCHYKSL-GEEIS 693
Query: 719 RDHPPADKKMKMEVSHAHCEGERGTNVLNLLLSIEASPXXXXXXXXXXXXXXXXQMDLIA 898
A KK K+EVS G N L +LLSIE +P QMDL A
Sbjct: 694 SVDQSAAKKRKIEVSPTSIVDNVGNNPLLVLLSIETTPVSISTSRSIQRLISKIQMDLSA 753
Query: 899 AKILEPYVPVLLYGIIGVFHNRFNSLWNPAIECLSVIIGRYPGVVWERYIQYLKRCQSLF 1078
+I Y P++L G+ G+ +N+F+ LW+P +EC+SV++ Y +VW I YL+RCQ+
Sbjct: 754 GRIANVYAPLVLSGLFGILNNQFSYLWDPVLECISVLVSLYFSLVWNTLIDYLERCQAT- 812
Query: 1079 LTCRDQLAESIPESSFESH-DLITHFKLFISPPSDGTPCGTILSLLIQSLQKVLIISESR 1255
L +S +SF+ L+ FKLF+ SD TP GTIL+LL+Q+LQK+ + E R
Sbjct: 813 RESSSSLHDSANGASFDQPVGLLGCFKLFVHHESDCTPSGTILTLLLQALQKIPTVIEPR 872
Query: 1256 TRQIIPLFLRYLGYNHNNLVSVKSYE 1333
+RQ IPLFL++LGYN +L SV ++
Sbjct: 873 SRQFIPLFLKFLGYNTLDLASVGLFD 898
>ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subunit processome component 20
homolog, partial [Cucumis sativus]
Length = 2538
Score = 273 bits (698), Expect = 7e-71
Identities = 168/445 (37%), Positives = 257/445 (57%), Gaps = 1/445 (0%)
Frame = +2
Query: 2 NELVEDFEEEVVYLLVIFFERLPKPCSSLLEKGHKAPSEILVKVLNLSKKTIEYWVHAIK 181
NE +E EEV+YLL+ F ERLP E E + K+ N K + W+ I
Sbjct: 332 NESLESSPEEVIYLLLSFSERLPTEVLGTSE-------EEIPKINNFILKILRQWIKEIT 384
Query: 182 NIRHGNPECVQFEESRLVFLYGIVKSFPYVIDAQSERALLMDLVDALDQLLLTDSENIAG 361
+ + + ES+L +G+V+ PY++ Q+ +LL++L+DALD+L + + I G
Sbjct: 385 DFVQHSSSTIDINESKLATFWGVVRCCPYILKFQASSSLLVELIDALDRLCTLEGD-IFG 443
Query: 362 FTKKIWTSLIGCCLGSYVKLHSVQIRNDEASVVKLLNLAKRYKSSSLVLSTVADFLDSIY 541
K+ S+IG +GSY+KL S + E + +L+ LAKRY S S VL VAD+LD IY
Sbjct: 444 IPKEKLESIIGATIGSYLKLLSSEKAGLE-ELSRLVYLAKRYSSCSQVLVAVADYLDFIY 502
Query: 542 ESTLVHTDSSKIQSD-LRAEKAVEALAIFAENLCHEDKQIRLSTLRILCHYESLIAENIS 718
L S +I S+ +A+K +A+ +FA+NL H DK +RLSTLRILCHYE L + ++
Sbjct: 503 GPALEADISKRIYSEEFQADKVEDAVQVFADNLRHSDKGVRLSTLRILCHYEPLQSATLT 562
Query: 719 RDHPPADKKMKMEVSHAHCEGERGTNVLNLLLSIEASPXXXXXXXXXXXXXXXXQMDLIA 898
++ D +M+ E + + G+ VL LLLS+E++ Q L+A
Sbjct: 563 KESS-IDNEMEAENLEPYSDDLVGSEVLRLLLSVESTSTSISTSRKIILFISGVQRALMA 621
Query: 899 AKILEPYVPVLLYGIIGVFHNRFNSLWNPAIECLSVIIGRYPGVVWERYIQYLKRCQSLF 1078
I E Y+ V L GIIG+F NRF+ +W+ A ECL+ +I + VW++ I Y ++ +
Sbjct: 622 EGIPEAYLLVALNGIIGIFQNRFSYIWDQASECLASLIRNHSEFVWDKLICYFQQ----W 677
Query: 1079 LTCRDQLAESIPESSFESHDLITHFKLFISPPSDGTPCGTILSLLIQSLQKVLIISESRT 1258
L DQ ESS E +DL+ F+ F+ P +D TP T+LSL++QSLQK I ES++
Sbjct: 678 LCLLDQPGRDTAESSDELNDLVRCFRSFVVPSTDSTPLFTLLSLVLQSLQKNSTIVESQS 737
Query: 1259 RQIIPLFLRYLGYNHNNLVSVKSYE 1333
++++PLFL +LGY+ ++ SV S++
Sbjct: 738 QRMLPLFLTFLGYSTGHVDSVDSFK 762