BLASTX nr result

ID: Bupleurum21_contig00013230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013230
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22750.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_002318221.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_004162421.1| PREDICTED: uncharacterized LOC101214826 [Cuc...    67   1e-09
ref|XP_004148380.1| PREDICTED: uncharacterized protein LOC101214...    67   1e-09
ref|XP_002865906.1| hypothetical protein ARALYDRAFT_918272 [Arab...    63   3e-08

>emb|CBI22750.3| unnamed protein product [Vitis vinifera]
          Length = 1591

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 53/103 (51%), Positives = 62/103 (60%), Gaps = 18/103 (17%)
 Frame = -1

Query: 455  FGYSGNKSKVTKWRNRSILEFFKYQKGS---IPHKTMERKRQKRTSQPSM---------- 315
            F YS N SKV+K ++ SILEF+KYQ GS      K  E+K QKR  QPS           
Sbjct: 1489 FEYSDNISKVSKRKSPSILEFYKYQGGSSRSTSKKVSEQKGQKRPFQPSRSYKKGNASAS 1548

Query: 314  -----TPVDKRARQTLSFATIGSGGQSKLVWGDKGTHALKRQF 201
                 TP+DKRARQTLSFAT GSG Q+KLVWGD     L ++F
Sbjct: 1549 SCPTWTPIDKRARQTLSFATNGSGRQTKLVWGDGNAQCLNKRF 1591


>ref|XP_002318221.1| predicted protein [Populus trichocarpa] gi|222858894|gb|EEE96441.1|
            predicted protein [Populus trichocarpa]
          Length = 1337

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 46/99 (46%), Positives = 59/99 (59%), Gaps = 15/99 (15%)
 Frame = -1

Query: 455  FGYSGNKSKVTKWRNRSILEFFKYQKGSIPHKTMERKRQKRTSQ---------------P 321
            F  SGN SK T+ R+ SIL+FFKYQ GS P K  E+K+QK+  Q               P
Sbjct: 1236 FWNSGNTSKATERRSLSILDFFKYQGGSTPRKVYEQKKQKQPIQLSSSSQKERTSASLIP 1295

Query: 320  SMTPVDKRARQTLSFATIGSGGQSKLVWGDKGTHALKRQ 204
            S TP DKR++QTLSFA  G G Q++LVW D   H + ++
Sbjct: 1296 SWTPKDKRSKQTLSFAMDG-GNQTRLVWSDGNAHRMSKK 1333


>ref|XP_004162421.1| PREDICTED: uncharacterized LOC101214826 [Cucumis sativus]
          Length = 1654

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 41/81 (50%), Positives = 50/81 (61%), Gaps = 16/81 (19%)
 Frame = -1

Query: 431  KVTKWRNRSILEFFKYQKGSIPHKTMERKRQKRTSQPS----------------MTPVDK 300
            K T  R+ SILEFFKYQ GS   K  ++KRQK++ Q S                 TP+DK
Sbjct: 1558 KKTVKRSSSILEFFKYQGGSTLKKP-DQKRQKQSLQSSNSSKNVLSAPSSELSSWTPIDK 1616

Query: 299  RARQTLSFATIGSGGQSKLVW 237
            R+RQTLSFAT G+G Q+KLVW
Sbjct: 1617 RSRQTLSFATDGNGSQTKLVW 1637


>ref|XP_004148380.1| PREDICTED: uncharacterized protein LOC101214826 [Cucumis sativus]
          Length = 1573

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 41/81 (50%), Positives = 50/81 (61%), Gaps = 16/81 (19%)
 Frame = -1

Query: 431  KVTKWRNRSILEFFKYQKGSIPHKTMERKRQKRTSQPS----------------MTPVDK 300
            K T  R+ SILEFFKYQ GS   K  ++KRQK++ Q S                 TP+DK
Sbjct: 1477 KKTVKRSSSILEFFKYQGGSTLKKP-DQKRQKQSLQSSNSSKNVLSAPSSELSSWTPIDK 1535

Query: 299  RARQTLSFATIGSGGQSKLVW 237
            R+RQTLSFAT G+G Q+KLVW
Sbjct: 1536 RSRQTLSFATDGNGSQTKLVW 1556


>ref|XP_002865906.1| hypothetical protein ARALYDRAFT_918272 [Arabidopsis lyrata subsp.
            lyrata] gi|297311741|gb|EFH42165.1| hypothetical protein
            ARALYDRAFT_918272 [Arabidopsis lyrata subsp. lyrata]
          Length = 1581

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 11/78 (14%)
 Frame = -1

Query: 437  KSKVTKWRNRSILEFFKYQKGS-IPHKTMERKRQKRTSQP----------SMTPVDKRAR 291
            K   TK ++ SILEFFKY+ G  IP +  +++ +  ++ P          S TP+DKRA+
Sbjct: 1503 KKASTKRKSPSILEFFKYKGGKKIPEEKKQKRSKTSSASPKNERFYSPLKSWTPIDKRAK 1562

Query: 290  QTLSFATIGSGGQSKLVW 237
            Q+LS+A  G+GGQ+KLVW
Sbjct: 1563 QSLSYAGNGTGGQTKLVW 1580


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