BLASTX nr result

ID: Bupleurum21_contig00013222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013222
         (1603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519600.1| PREDICTED: uncharacterized protein LOC100807...   200   8e-49
ref|XP_003545110.1| PREDICTED: uncharacterized protein LOC100783...   197   7e-48
ref|XP_002531205.1| conserved hypothetical protein [Ricinus comm...   197   7e-48
ref|XP_002298842.1| predicted protein [Populus trichocarpa] gi|2...   195   3e-47
ref|XP_003617651.1| PHD finger protein [Medicago truncatula] gi|...   191   6e-46

>ref|XP_003519600.1| PREDICTED: uncharacterized protein LOC100807139 [Glycine max]
          Length = 830

 Score =  200 bits (509), Expect = 8e-49
 Identities = 120/318 (37%), Positives = 173/318 (54%), Gaps = 5/318 (1%)
 Frame = -3

Query: 1322 DVKLMQMNGSCSSIGKTVKEQSSGPGADNLAMTLGSVSGTPDNCKVERLVEEKIDPDG-T 1146
            D K MQ  G    I  T++     P   N   +L S + +P  C +     ++I+    T
Sbjct: 519  DTKDMQGTG----ISSTIEAIDKKPDPKNSMKSL-SAAYSPSPCLLGENSAQQINSKVLT 573

Query: 1145 LQHSAISDTVCKIFDDSQYFGHREDND----HTELTNIFKIPSEQCLQTNDKVVELDKSC 978
             + ++ S+++ K+ + ++    +   D    HT   +  ++ S++ + +N    +  +S 
Sbjct: 574  GRETSESESLPKLSELAKCENLQSSQDFQVEHTMSQDNAEVSSDKHVDSNMMNNQQKESH 633

Query: 977  GDFLEHKLCDPAKEDNIKVSVVNPVEATQTCVGHKEHGGSLSDSLHDVNWTGDILQVVDG 798
            G   E  L    K D+   ++ N V  + T    ++H    SDS H V W GD++Q+VD 
Sbjct: 634  G---EENLVYDIKRDDQDAALENSVGTSGTNTDGRQHSALSSDSSHAVEWIGDVVQLVDE 690

Query: 797  KTYYQSCLVHGVLYKVQDHVLFHSNNNILTPFKLQGMWEDNKTRSKWVVASRCYFPADLP 618
            K YYQSC V GV Y++Q H LF + +  LTP KLQ MWED KT  KWV  + CYFP DLP
Sbjct: 691  KKYYQSCCVDGVTYRLQGHALFPTGHGKLTPSKLQSMWEDCKTGLKWVKVTNCYFPDDLP 750

Query: 617  EAVGRPCSPETNEVYESNHDTTLSAGLIKGPCEVLPPRTFIEETERRAQLGMGRSDSLHP 438
              +G PC  E NEVYESN D T  A  I+GPCEVLP   F +E +RR QL    S  + P
Sbjct: 751  GNIGHPCISEVNEVYESNSDRTEMASSIRGPCEVLPSDKFKQENDRRCQLRNEESSRVQP 810

Query: 437  LFICKWFYDETKELFRIV 384
            +F+C+WFYDE K+LF+ V
Sbjct: 811  IFLCRWFYDEFKKLFQPV 828


>ref|XP_003545110.1| PREDICTED: uncharacterized protein LOC100783208 [Glycine max]
          Length = 830

 Score =  197 bits (501), Expect = 7e-48
 Identities = 120/340 (35%), Positives = 174/340 (51%), Gaps = 11/340 (3%)
 Frame = -3

Query: 1370 TPVGTSNHIAIHGEMVDVKLMQMNGSCSSIGKTVKEQSSGPGADNLAMTLGSVSGTPDNC 1191
            T  G ++++ +  E        M G+  +I  T++     P  +N   +L + S +P  C
Sbjct: 501  TVCGGNHNVELSSESRIPDTKDMQGT--NISSTIEAIDKKPDPNNSMKSLSAAS-SPSPC 557

Query: 1190 -----KVERLVEEKIDPDGTLQHSAI----SDTVCKIFDDSQYFG--HREDNDHTELTNI 1044
                  V+++  + +    TL+  ++        C+    SQ F   H    D+ E+++ 
Sbjct: 558  LLGKNSVQQINSKVLTGKETLESESLPKLSEPAKCEDLQSSQDFQVEHTMSQDNPEVSSD 617

Query: 1043 FKIPSEQCLQTNDKVVELDKSCGDFLEHKLCDPAKEDNIKVSVVNPVEATQTCVGHKEHG 864
             K      +    K     KS        L    K D+   ++ N V  + T     +H 
Sbjct: 618  -KHVDHNIMNNKQKEFHGGKS--------LTYDIKLDDQDAALANFVGTSGTNTDGTQHS 668

Query: 863  GSLSDSLHDVNWTGDILQVVDGKTYYQSCLVHGVLYKVQDHVLFHSNNNILTPFKLQGMW 684
               SDS H V W GD++Q+VD K YYQSC + GV Y++Q H LF +++  LTP KLQ MW
Sbjct: 669  ALSSDSSHAVEWIGDVVQLVDEKKYYQSCCIDGVTYRLQGHALFPTSHGKLTPSKLQSMW 728

Query: 683  EDNKTRSKWVVASRCYFPADLPEAVGRPCSPETNEVYESNHDTTLSAGLIKGPCEVLPPR 504
            ED KT  KWV  + CYFP DLP  +G PC  E NEVYESN D T  A  I+GPCEVLP  
Sbjct: 729  EDCKTGLKWVKVTNCYFPDDLPGNIGHPCISEVNEVYESNGDRTEMANSIRGPCEVLPSD 788

Query: 503  TFIEETERRAQLGMGRSDSLHPLFICKWFYDETKELFRIV 384
             F +E + R QLG+  +  + P+F+C+WFYDE K+LF+ V
Sbjct: 789  KFKQENDMRCQLGIEETSKVQPIFLCRWFYDEFKKLFQPV 828


>ref|XP_002531205.1| conserved hypothetical protein [Ricinus communis]
            gi|223529207|gb|EEF31182.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 892

 Score =  197 bits (501), Expect = 7e-48
 Identities = 118/329 (35%), Positives = 176/329 (53%), Gaps = 33/329 (10%)
 Frame = -3

Query: 1307 QMNGSCSSIGKTVKEQSSGPGADNLAMTLGSVSGTPD------------NCKVERLVEEK 1164
            ++NG+ +       +Q    G +N   +LG+VS  P                   + +E+
Sbjct: 536  EINGNSTPSSVKDMDQGMCAGPNNSTNSLGAVSDYPSVGLSSGSSIQLTQVSGSCIQDER 595

Query: 1163 IDPDGTLQHSAI-SDTVCKIFDDSQYFGHREDNDHTELTNIFKIPSEQCLQTNDKVVELD 987
               +  LQ  AI  +T+   F++S+   + +D +  EL++  +IP +   Q N  V EL+
Sbjct: 596  SVSESKLQSPAILCETITNKFENSESSHNLQDINQRELSSTGEIPMKTS-QNNCMVDELE 654

Query: 986  KSCGDFLEHKLCDPA---KEDNIKVSVVNPVEATQTCVGHKEHGGSLSDSLHDVNWTGDI 816
               G    H  C      K++   ++    V +++     + H G  S  +H V W G++
Sbjct: 655  SIRG----HSDCPSTLDMKQNEQDIAHAKSVGSSEANNKARMHAGMNSAGIHSVKWIGNV 710

Query: 815  LQVVDGKTYYQSCLVHGVLYKVQDHVLFHSNNNILTPFKLQG-----------------M 687
            L+V DGKT+Y SC V G  YKVQDH LF S++  L P KLQ                  M
Sbjct: 711  LKVADGKTFYVSCSVGGATYKVQDHALFRSSHEKLIPSKLQASDMRVIPSYVYCSSLLAM 770

Query: 686  WEDNKTRSKWVVASRCYFPADLPEAVGRPCSPETNEVYESNHDTTLSAGLIKGPCEVLPP 507
            WED +T SKWV+  +CYFP DLP+AVG PC+PE+NEVYESNH++++ A LI+GPC+VLPP
Sbjct: 771  WEDVETGSKWVLVRQCYFPGDLPKAVGHPCAPESNEVYESNHESSILADLIQGPCQVLPP 830

Query: 506  RTFIEETERRAQLGMGRSDSLHPLFICKW 420
              F E  ERR+QLG+   +   P+F+CK+
Sbjct: 831  TKFQENAERRSQLGIEGKNESWPVFLCKY 859


>ref|XP_002298842.1| predicted protein [Populus trichocarpa] gi|222846100|gb|EEE83647.1|
            predicted protein [Populus trichocarpa]
          Length = 798

 Score =  195 bits (495), Expect = 3e-47
 Identities = 122/354 (34%), Positives = 178/354 (50%), Gaps = 33/354 (9%)
 Frame = -3

Query: 1376 PGTPVGTSNHIAIHGEMVDVKLMQM-----------NGSCSSIGKTVKEQ---------- 1260
            P  P G+ + +    E VD+K+ Q            +GS +++      +          
Sbjct: 469  PSNPAGSHSSLEKKAENVDLKVDQQKSTNGVQNNAGSGSVNNVESASDSRISGEREMPRD 528

Query: 1259 ---SSGPGADNLAMTLGSVSGTPDNCKVERLVEEKIDPDGTLQHSAISDTVCKIF--DDS 1095
               SSG  AD       S    P+N       ++++      + S++S++  KI   +DS
Sbjct: 529  GITSSGKDADQ------STCSFPNNSTERSTQQDQVSESPAQEKSSLSESSEKISKCEDS 582

Query: 1094 QYFGHREDNDHTELTNIFKIPSEQCLQTNDKVVELDKSCGDFLEHKLCDPAKEDNIKVSV 915
            +     +D   TE +N  K P                      +H + + +         
Sbjct: 583  KPLHISQDIIQTEQSNFPKAPLTP-----------------HQDHSIMEESAS------- 618

Query: 914  VNPVEATQTCVGHKEHGGSLSDSLHDVNWTGDILQVVDGKTYYQSCLVHGVLYKVQDHVL 735
            V         VG  +H G  S  +H V W G+ ++V DGKT+Y+SC + GV YKVQDH L
Sbjct: 619  VRGSSVPNNRVG--KHPGLSSSGIHSVEWIGNEIKVADGKTFYKSCCIDGVSYKVQDHAL 676

Query: 734  FHSNNNILTPFKLQGMWEDNKTRSKWVVASRCYFPADLPEAVGRPCSPETNEVYESNHDT 555
            FHS++  LTP KLQ MWE+ +T SKWV+ S+CYFP DLP AVG PC+PE+NEVYESNH++
Sbjct: 677  FHSSDGKLTPSKLQTMWEEIETGSKWVLVSQCYFPGDLPAAVGHPCAPESNEVYESNHES 736

Query: 554  TLSAGLIKGPCEVLPPRTFIEETERRAQLGMGRSDSLHPLFICK-------WFY 414
            ++ A LI+GPCEVLPP  F E +ER+ +L +  ++   P+FICK       WFY
Sbjct: 737  SVMASLIEGPCEVLPPNKFKEMSERQNRLAIEANNGSAPVFICKELHDMSIWFY 790


>ref|XP_003617651.1| PHD finger protein [Medicago truncatula] gi|355518986|gb|AET00610.1|
            PHD finger protein [Medicago truncatula]
          Length = 874

 Score =  191 bits (484), Expect = 6e-46
 Identities = 90/186 (48%), Positives = 118/186 (63%)
 Frame = -3

Query: 941  KEDNIKVSVVNPVEATQTCVGHKEHGGSLSDSLHDVNWTGDILQVVDGKTYYQSCLVHGV 762
            K D++  +  N V  + T     +H    SDS H V W GD++Q+VD K +YQSC + GV
Sbjct: 687  KRDDLDAAQPNSVRGSGTNTEGIQHCALSSDSSHAVEWIGDVVQLVDEKKHYQSCCIDGV 746

Query: 761  LYKVQDHVLFHSNNNILTPFKLQGMWEDNKTRSKWVVASRCYFPADLPEAVGRPCSPETN 582
             Y++Q H  F S++  LTP KLQ MWED+KT  KWV  ++CYFP DLP  +G PC  E N
Sbjct: 747  TYRLQGHAFFTSSHGKLTPSKLQSMWEDSKTGVKWVKVTKCYFPDDLPGNIGHPCISEVN 806

Query: 581  EVYESNHDTTLSAGLIKGPCEVLPPRTFIEETERRAQLGMGRSDSLHPLFICKWFYDETK 402
            EVYESN D    A  I+GPC VLP   F +E +RR Q G+  S S+ P+F+C+WFYDE K
Sbjct: 807  EVYESNSDRVEMASSIRGPCVVLPYDKFKQENDRRCQFGVEASASVQPIFLCRWFYDEIK 866

Query: 401  ELFRIV 384
            + F+ V
Sbjct: 867  KSFQPV 872


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