BLASTX nr result

ID: Bupleurum21_contig00013207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013207
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512373.1| rac-GTP binding protein, putative [Ricinus c...   314   1e-83
ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   312   4e-83
ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   312   4e-83
emb|CBI36765.3| unnamed protein product [Vitis vinifera]              312   4e-83
ref|XP_002284757.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis...   312   4e-83

>ref|XP_002512373.1| rac-GTP binding protein, putative [Ricinus communis]
           gi|223548334|gb|EEF49825.1| rac-GTP binding protein,
           putative [Ricinus communis]
          Length = 583

 Score =  314 bits (804), Expect = 1e-83
 Identities = 163/216 (75%), Positives = 178/216 (82%), Gaps = 2/216 (0%)
 Frame = -1

Query: 644 GSPGVRIVVAGDKGTGKSSLIVTAAADTFPLNVPPVLPPTRFLGD-RPEKVPVTVIDTSS 468
           G  GVRIVVAGD+GTGKSSLIVTAA DTFP NVPPVLPPTR   D  P+++PVT+IDTSS
Sbjct: 13  GRSGVRIVVAGDRGTGKSSLIVTAAVDTFPANVPPVLPPTRLPEDFYPDRIPVTIIDTSS 72

Query: 467 SAXXXXXXXXXLQRADAVVLTYACDEPSTLDRLSTFWLPELRRLEVYVPIIVVGCKLDLL 288
                      L+RADAVVLTYACD P TLDRLSTFWLPELRRLEV VP+IVVGCKLDL 
Sbjct: 73  RVEDSGKVAEELKRADAVVLTYACDRPETLDRLSTFWLPELRRLEVKVPVIVVGCKLDLR 132

Query: 287 EEHAY-SLEQVMSPIMNQFREIETCMECSALKRILISEIFNYCQRAVLNPTAPLFDQEVQ 111
           +E+   SLE VMSPIM QFREIETC+ECSA K I I E+F Y Q+AVL+PT PLFDQE Q
Sbjct: 133 DENQQVSLEIVMSPIMQQFREIETCIECSAYKHIQIPEVFYYAQKAVLHPTGPLFDQESQ 192

Query: 110 TLKPRCVRALKRIFNICDQDKDGALSDAELNDFQVK 3
           TLKPRCVRALKRIF +CDQD+DGALSDAELNDFQVK
Sbjct: 193 TLKPRCVRALKRIFILCDQDRDGALSDAELNDFQVK 228


>ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 648

 Score =  312 bits (799), Expect = 4e-83
 Identities = 160/218 (73%), Positives = 180/218 (82%), Gaps = 2/218 (0%)
 Frame = -1

Query: 650 AKGSPGVRIVVAGDKGTGKSSLIVTAAADTFPLNVPPVLPPTRFLGD-RPEKVPVTVIDT 474
           ++G   VRIV+AGD+GTGKSSLIVTAAAD FP+NVPPVLPPTR   D  P++VP T+IDT
Sbjct: 11  SRGRTEVRIVIAGDRGTGKSSLIVTAAADNFPVNVPPVLPPTRLPEDFYPDRVPTTIIDT 70

Query: 473 SSSAXXXXXXXXXLQRADAVVLTYACDEPSTLDRLSTFWLPELRRLEVYVPIIVVGCKLD 294
           SS           L+RADAVVLTYACD+P+TLDRLSTFWLP+LR+LEV VP+IVVGCKLD
Sbjct: 71  SSRTEDSAKVAEELKRADAVVLTYACDQPNTLDRLSTFWLPKLRQLEVRVPVIVVGCKLD 130

Query: 293 LLEE-HAYSLEQVMSPIMNQFREIETCMECSALKRILISEIFNYCQRAVLNPTAPLFDQE 117
           L +E    SLEQVMSPIM QFREIETC+ECSA K I I E+F Y Q+AVL+PT PLFDQE
Sbjct: 131 LRDEDQQVSLEQVMSPIMQQFREIETCIECSAFKHIQIPEVFYYAQKAVLHPTGPLFDQE 190

Query: 116 VQTLKPRCVRALKRIFNICDQDKDGALSDAELNDFQVK 3
            QTLKPRCVRALKRIF +CD DKDGALSDAELNDFQVK
Sbjct: 191 TQTLKPRCVRALKRIFILCDHDKDGALSDAELNDFQVK 228


>ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 647

 Score =  312 bits (799), Expect = 4e-83
 Identities = 160/218 (73%), Positives = 180/218 (82%), Gaps = 2/218 (0%)
 Frame = -1

Query: 650 AKGSPGVRIVVAGDKGTGKSSLIVTAAADTFPLNVPPVLPPTRFLGD-RPEKVPVTVIDT 474
           ++G   VRIV+AGD+GTGKSSLIVTAAAD FP+NVPPVLPPTR   D  P++VP T+IDT
Sbjct: 11  SRGRTEVRIVIAGDRGTGKSSLIVTAAADNFPVNVPPVLPPTRLPEDFYPDRVPTTIIDT 70

Query: 473 SSSAXXXXXXXXXLQRADAVVLTYACDEPSTLDRLSTFWLPELRRLEVYVPIIVVGCKLD 294
           SS           L+RADAVVLTYACD+P+TLDRLSTFWLP+LR+LEV VP+IVVGCKLD
Sbjct: 71  SSRTEDSAKVAEELKRADAVVLTYACDQPNTLDRLSTFWLPKLRQLEVRVPVIVVGCKLD 130

Query: 293 LLEE-HAYSLEQVMSPIMNQFREIETCMECSALKRILISEIFNYCQRAVLNPTAPLFDQE 117
           L +E    SLEQVMSPIM QFREIETC+ECSA K I I E+F Y Q+AVL+PT PLFDQE
Sbjct: 131 LRDEDQQVSLEQVMSPIMQQFREIETCIECSAFKHIQIPEVFYYAQKAVLHPTGPLFDQE 190

Query: 116 VQTLKPRCVRALKRIFNICDQDKDGALSDAELNDFQVK 3
            QTLKPRCVRALKRIF +CD DKDGALSDAELNDFQVK
Sbjct: 191 TQTLKPRCVRALKRIFILCDHDKDGALSDAELNDFQVK 228


>emb|CBI36765.3| unnamed protein product [Vitis vinifera]
          Length = 684

 Score =  312 bits (799), Expect = 4e-83
 Identities = 162/223 (72%), Positives = 182/223 (81%), Gaps = 2/223 (0%)
 Frame = -1

Query: 665 AGVGSAKGSPGVRIVVAGDKGTGKSSLIVTAAADTFPLNVPPVLPPTRFLGD-RPEKVPV 489
           AG  ++    GVRIVVAGD+GTGKSSLIVTAAA+ FP NV PVLPPTR   D  P++VP+
Sbjct: 43  AGATNSGNRTGVRIVVAGDRGTGKSSLIVTAAAENFPANVAPVLPPTRLPDDFYPDRVPI 102

Query: 488 TVIDTSSSAXXXXXXXXXLQRADAVVLTYACDEPSTLDRLSTFWLPELRRLEVYVPIIVV 309
           T+IDTSSS          L+RADAVVLTYACD+P+TLDRLSTFWLPELRRLEV VP+IVV
Sbjct: 103 TIIDTSSSLENRSALADELRRADAVVLTYACDQPATLDRLSTFWLPELRRLEVKVPVIVV 162

Query: 308 GCKLDLLEEHAY-SLEQVMSPIMNQFREIETCMECSALKRILISEIFNYCQRAVLNPTAP 132
           GCKLDL +E+   SLEQVMSPIM QFREIETC+ECSA   I I E+F Y Q+AVL+PT P
Sbjct: 163 GCKLDLRDENQQMSLEQVMSPIMQQFREIETCIECSASTHIQIPEVFYYAQKAVLHPTGP 222

Query: 131 LFDQEVQTLKPRCVRALKRIFNICDQDKDGALSDAELNDFQVK 3
           LFDQE QTLKPRCVRALKRIF +CD D+DGALSDAELNDFQVK
Sbjct: 223 LFDQETQTLKPRCVRALKRIFILCDHDRDGALSDAELNDFQVK 265


>ref|XP_002284757.1| PREDICTED: mitochondrial Rho GTPase 1 [Vitis vinifera]
          Length = 647

 Score =  312 bits (799), Expect = 4e-83
 Identities = 162/223 (72%), Positives = 182/223 (81%), Gaps = 2/223 (0%)
 Frame = -1

Query: 665 AGVGSAKGSPGVRIVVAGDKGTGKSSLIVTAAADTFPLNVPPVLPPTRFLGD-RPEKVPV 489
           AG  ++    GVRIVVAGD+GTGKSSLIVTAAA+ FP NV PVLPPTR   D  P++VP+
Sbjct: 6   AGATNSGNRTGVRIVVAGDRGTGKSSLIVTAAAENFPANVAPVLPPTRLPDDFYPDRVPI 65

Query: 488 TVIDTSSSAXXXXXXXXXLQRADAVVLTYACDEPSTLDRLSTFWLPELRRLEVYVPIIVV 309
           T+IDTSSS          L+RADAVVLTYACD+P+TLDRLSTFWLPELRRLEV VP+IVV
Sbjct: 66  TIIDTSSSLENRSALADELRRADAVVLTYACDQPATLDRLSTFWLPELRRLEVKVPVIVV 125

Query: 308 GCKLDLLEEHAY-SLEQVMSPIMNQFREIETCMECSALKRILISEIFNYCQRAVLNPTAP 132
           GCKLDL +E+   SLEQVMSPIM QFREIETC+ECSA   I I E+F Y Q+AVL+PT P
Sbjct: 126 GCKLDLRDENQQMSLEQVMSPIMQQFREIETCIECSASTHIQIPEVFYYAQKAVLHPTGP 185

Query: 131 LFDQEVQTLKPRCVRALKRIFNICDQDKDGALSDAELNDFQVK 3
           LFDQE QTLKPRCVRALKRIF +CD D+DGALSDAELNDFQVK
Sbjct: 186 LFDQETQTLKPRCVRALKRIFILCDHDRDGALSDAELNDFQVK 228


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