BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00013202
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]              95   1e-17
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...    95   1e-17
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    95   1e-17
dbj|BAE98403.1| putative non-LTR reverse transcriptase [Arabidop...    94   2e-17
dbj|BAB01431.1| non-LTR retroelement reverse transcriptase-like ...    94   2e-17

>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 48/158 (30%), Positives = 85/158 (53%), Gaps = 10/158 (6%)
 Frame = -2

Query: 632 WNSTRTSSQPMPWHTTVWNSLAIPRCSFILWLLLRGRLTTKDRLIRFGIVTDPSCLLCGE 453
           WN TR +S P+ WH  +W + A P+ SF  WL ++ RL+T D+++++     P+C+LC  
Sbjct: 474 WNQTRNTSTPVTWHMGIWFAHATPKFSFCAWLAVQNRLSTGDKMLQWNRRLSPTCVLCNN 533

Query: 452 ENETIEHLFFSCRYSRHATANSLFPI-----PTDWQTSIHGGTSIDQQLHYLYIA----- 303
             ET  HLFFSC Y+     N    I      T+W T +   ++  +     ++A     
Sbjct: 534 NIETRNHLFFSCCYTAEIWENLAKNIYKAKFSTNWSTILTSVSTTWRNRTESFLARYIFQ 593

Query: 302 SAAYSIWQERNSRLHKSQAITASQLSFNIKRMIRERVT 189
           +  ++IW ERN R H  ++ +A+ L + + + +R +++
Sbjct: 594 ATIHTIWHERNGRRHGERSNSATHLIWWLDKQMRNQIS 631


>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
 Frame = -2

Query: 638 QIWNSTRTSSQPMPWHTTVWNSLAIPRCSFILWLLLRGRLTTKDRLIRFGIVTDPSCLLC 459
           + W  TR       W+  +W S A P+ SFI WL  + RL+T DR++ +    + SC+ C
Sbjct: 261 ETWADTREQKPRNEWYQGIWFSHATPKYSFITWLATKNRLSTGDRMMSWNAGVNLSCVFC 320

Query: 458 GEENETIEHLFFSCRYSRHATANSLFPI-----PTDWQTSIHGGTSIDQQLHYLYIASAA 294
            E+ ET  HLFF+CRYSR   +     +      TDW T +   T      + L++   A
Sbjct: 321 QEQTETRNHLFFTCRYSREVWSGLTSKLLTRHYSTDWTTILKLLTDKTLGNNRLFLLRYA 380

Query: 293 -----YSIWQERNSRLHKSQAITASQLSFNIKRMIRERVT 189
                YSIW+ERNSR H  + + ++ L   + + +R +++
Sbjct: 381 FQILVYSIWKERNSRRHGEEPLPSALLLKRLDKEVRNKLS 420


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 10/175 (5%)
 Frame = -2

Query: 632  WNSTRTSSQPMPWHTTVWNSLAIPRCSFILWLLLRGRLTTKDRLIRFGIVTDPSCLLCGE 453
            WN  RTSS    WH  VW + A P+ SF  WL +R RL+T DR++ +   T  +C+ C  
Sbjct: 766  WNHIRTSSNQRAWHKGVWFAHATPKFSFCAWLAIRNRLSTGDRMMTWNNGTPTTCVFCSS 825

Query: 452  ENETIEHLFFSCRYSRH---ATANSLFP--IPTDWQTSIH-----GGTSIDQQLHYLYIA 303
              ET +HLFF C YS     + A +++     T W   ++         I   L      
Sbjct: 826  PMETRDHLFFQCCYSSEIWTSIAKNVYKDRFSTKWSAVVNYISDSQPDRIQSFLSRYTFQ 885

Query: 302  SAAYSIWQERNSRLHKSQAITASQLSFNIKRMIRERVTLSSKLKKQIRRNPALVT 138
             + +SIW+ERNSR H  ++ +AS L   I + IR +++ + K K  +R    L T
Sbjct: 886  VSIHSIWRERNSRRHGEKSRSASNLIRQIDKTIRNQLS-TIKKKGDLRLEKGLQT 939


>dbj|BAE98403.1| putative non-LTR reverse transcriptase [Arabidopsis thaliana]
          Length = 278

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 57/163 (34%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
 Frame = -2

Query: 632 WNSTRTSSQPMPWHTTVWNSLAIPRCSFILWLLLRGRLTTKDRLIRFGIVTDPSCLLCGE 453
           W   RT S    W+  VW   + P+ SF+ WL    RL T DRL ++      +C+ C E
Sbjct: 99  WQQIRTISNECEWYRGVWFPSSTPKYSFVTWLAFHNRLATGDRLYKWNSEARATCVFCDE 158

Query: 452 ENETIEHLFFSCRYSRH---ATANSLFPIPTDWQTSIHGGTSIDQQLHYLYIASAAY--- 291
           E ET +HLFFSC YS     A A  L         S+     +D    YL++ +  Y   
Sbjct: 159 ELETRDHLFFSCPYSSQIWIALAKGLLNGRNVSSWSLITPHLLDSSQPYLHVFTLRYTFQ 218

Query: 290 ----SIWQERNSRLHKSQAITASQLSFNIKRMIRERVTLSSKL 174
               S+W+ERN R H   AI AS+L+  I + IR R +   K+
Sbjct: 219 ALIHSLWRERNGRRHGEPAIPASKLTKLIDKNIRNRFSTLQKM 261


>dbj|BAB01431.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 637

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 57/163 (34%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
 Frame = -2

Query: 632 WNSTRTSSQPMPWHTTVWNSLAIPRCSFILWLLLRGRLTTKDRLIRFGIVTDPSCLLCGE 453
           W   RT S    W+  VW   + P+ SF+ WL    RL T DRL ++      +C+ C E
Sbjct: 267 WQQIRTISNECEWYRGVWFPSSTPKYSFVTWLAFHNRLATGDRLYKWNSEARATCVFCDE 326

Query: 452 ENETIEHLFFSCRYSRH---ATANSLFPIPTDWQTSIHGGTSIDQQLHYLYIASAAY--- 291
           E ET +HLFFSC YS     A A  L         S+     +D    YL++ +  Y   
Sbjct: 327 ELETRDHLFFSCPYSSQIWIALAKGLLNGRNVSSWSLITPHLLDSSQPYLHVFTLRYTFQ 386

Query: 290 ----SIWQERNSRLHKSQAITASQLSFNIKRMIRERVTLSSKL 174
               S+W+ERN R H   AI AS+L+  I + IR R +   K+
Sbjct: 387 ALIHSLWRERNGRRHGEPAIPASKLTKLIDKNIRNRFSTLQKM 429